@TOME V2.3
(Nov 2016)

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2472: (2016-04-04 )
MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSSQLVIMDVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRILEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEAICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRNSVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTLKELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS

Atome Classification :

(20 SA) ------.........10.....-...20..-......30.......-----.-----40----.--------.----.--......50--.......----.----60.-----...----------------------.---...70........80.-.......90..--......-100..-----..-...110..-....-.120.......130....----...140.--.-------.--------....150.----.----.....160--..-----...-..170-.....--.-----------.180...---....190..---------...--..200.......210......--.220....----------...230....-----------..------.240.....----..250.......260-....-------...270.......---280.......290.....-----..300--........310...-...-..320.----------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------MSFASETKKELTHMDV-SDSDAKV-ELAAFIRMNGAISFS-----S-----Q-----L--------V----I--MDVQTENA--AIARRMY----Q----LLK-----DLY----------------------E---VPIELLVRRKMKLKKN-NVYIVRLKSGT--RGILED-LRILE-----PP-MTFTKSID-RGFV-KKRSAKRAYLRGAFLASG----SVNNPET--S-------S--------YHLEIFSV----Y----EEHNEAIC--AL-----MNQ-FDLNA-RTLER--K-----------NGFITYL---KEAEKITEF---------LSI--IGATSALLHFEDVRIMRDMRN--SVNRLVNC----------ETANLNKTIN-----------AA------VRQIDNIKY----IQSTVGLEALPERLR-EIAA-------LRIANEDVTLKEL---GEMLTTGQVSKSGINHRL-----RKLD---QIAERLRSGE-TPA-QVG-LKISNS----------
1 PsiBlast_PDB 88.1832%-102 - C5 -3HYI ? A:[8-291] -------TFSEEIKEELVNVPF-GSREEVISELLGFIKARGDLDVK-----S-----R-----H--------I----V--FSLHS--F--AASRRLL----N----LMK-----YLS----------------------K---PVSEIIVEK----KKR-YIKI------T--AEYSES-FMVIE-----P---FFDVAL----FV--------SFLRGLFLSGG----SMTNPRY--H----------------YHLEI-NL----F----EEETLALTRKSL-----KDF-FNINA-GIIEL--R-----------NTRKLYI---KSIKDILVF---------LEA--IGVQRKLEEIDRIVTERKVIG--DVNRTVNF----------IEANAIRTAN-----------ST------ARQIRAIEL----IKENMGLENLPEDLR-RVAL-------VRLRNKELSLREL---GKKL---NLTKSQIYSKL-----KRII---KIAERF-----------------------------
15 HHSearch 84.5132% -80 - C5 -3HYI ? A:[7-293] ------RTFSEEIKEELVNVPFGSREEVIS-ELLGFIKARGDLDVK-----S-----R-------------------H--IVFSLHSF--AASRRLL----N----LMK-----YLS----------------------K---PVSEIIVEK----K-K-RYIKITAEYS---ESFM---------------------VIE-P--F-FDVALFVSFLRGLFLSGG----SMTNPR---Y-------H--------YHLEINLF----E----EETLALTR--KS-----LKDFFNINA-GIIEL--R-----------NTRKLYI---KSIKDILVF---------LEA--IGVQRKLEEIDRIVTERKVIG--DVNRTVNF----------IEANAIRTAN-----------ST------ARQIRAIEL----IKENMGLENLPEDLR-RVAL-------VRLRNKELSLREL---GKKL-N--LTKSQIYSKL-----KRII---KIAERFGD---------------------------
36 Fugue 81.1031% -59 - C5 -3HYI ? A:[7-294] ------RTFSEEIKEELVNVPFGSREEVIS-ELLGFIKARGDLDVK-----S-----R-------------------H--IVFSLHSF--AASRRLL----N----LMK-----YLS----------------------K---PVSEIIVEKKKRYIKI-TAE-------------------------------YSESFMV-IEPF-FDVALFVSFLRGLFLSGG----SMTNPR---Y-------H--------YHLEINLFE---E----ETLALTRK--SL-----KDF-FNINA-GIIEL--R-----------NTRKLYI---KSIKDILVF---------LEA--IGVQRKLEEIDRIVTERKVIG--DVNRTVNF----------IEANAIRTAN-----------ST------ARQIRAIEL----IKENMGLENLPEDLR-RVAL-------VRLRNKELSLREL---GKKL---NLTKSQIYSKL-----KRII---KIAERFGDV--------------------------
2 PsiBlast_PDB 65.7027% -89 - C5 -3HYJ ? A:[8-191] -------TFSEEIKEELVNVPF-GSREEVISELLGFIKARGDLD-------------R-----H--------I----V--FSLHS--F--AASRRLL----N----LMK-----YLS----------------------K---PVSEIIVEKSH----R-YIKI------T--AEYSES-FMVIE-----PF-FDVALFV--------------SFLRGLFLSGG----SMTNPRY--H----------------YHLEI-NL----F----EEETLALTRKSL-----KDF-FNINA-GIIEL--R-----------NTRKLYI---KSIKDILVF---------LEA--IGVQRKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 63.1418%-103 - C5 -1DQ3 NDRZ_PYRFU A:[136-316] -------------------------FIFDY-WLAGFIAGDGCFDKY-----H-----S-----HVKGHEYIYD----R--LRIYDYRI--ETFEIIN----D----YLE-----KTF----------------------G---RKYSIQK-------DR-NIYYIDIKARNITSHYLKL-LE------------GIDNGIP-PQILKEGKNAVLSFIAGLFDAEG----HVSNKP---------------------GIELGMV----N----KRLIEDVT--HY-----LNA-LGIKA-RIREK--LRKDG-------IDYVLHV---EEYSSLLRF---------YEL--IGKN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 59.7620% -39 * C4 *4OJV PDE1_YEAST A:[1-369] -----------MVVFEITILGA-NGGPTEY-GTQCFI-LKPARTED-----P-----E-----L--------I----A--VDGGAGMY--QLREMLV----QGDDELVP-----SFY----------------------EHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQ--GEHFES-ANTMK-----KT-YEVFQGIT-DYYI-THP--HLDHISGLVVNSP----SIYEQEN--S-------K--------K-KTIWGL----P----HTIDVLQK--HV-----FND-LIWPD-LTAER--S-----------RKLKLKCLNPKEVQKCTIFPWDVIPFKVHHG--IGVKTGAPVYSTFYIFRD-RK--SKDCIIVCGDVEQDRRESEESLLEEFWS-----------YV------AENIPLVHLKGILVECSCPLSSKPEQLYGHLSP-------IYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTP-----AKRDPRLTILEELRFLA-EER-NLGDLRISIALEGHTLFL--
20 HHSearch 54.0615% -64 - C5 -2CW8 A:[274-432] ------------------------VDESLA-KLLGYYVSEGYARKQ-----R-----NPKNGWS--------Y----S--VKLYNEDP--EVLDDME----R----LAS-----RFF----------------------G---KVRR-------------GRNYVEIPKKIG-YLLFEN-MCG--------V-LAENKRIP-EFVFTSPKGVRLAFLEGYFIGDG----DVHPN------------K---------RLRLSTK----S----ELLANQLV--LL-----LNS-VGVSA-VKLGH--DS----------GVYRVYI---NE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 52.0017% -88 - C5 -3C0W SCE1_YEAST A:[31-215] -------------------------IEQFE-AGIGLILGDAYIRSR-----D-----EGK---T--------Y----C--MQFEWKNK--AYMDHVC----L----LYD-----QWV----------------------L---SPPHKKERVNH-L-GN-LVITWGAQTFK--HQAFNKLANLFI--------VNNKKTIP-NNLV--ENYLTPMSLAYWFMDDG----GKWDYNKNST-------N--------KSIVLNTQ----SFTF-EEVEYLVK--GL-----RNK-FQLNC-YVKIN--K-----------NKPIIYI----DSMSYLIF---------YNL--IKPY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 Fugue 51.9813% -55 - C5 -2DCH ? X:[10-216] -------------HSSGLVPRG-SHMKVWD-YLCGLIAADGHLDEE-----G-----Y-----I--------T----I--LQ---KDR--RFIDKIV----A----LLK-----SA------------------------------EIKISSLFYDKGA-GVWKIKVKD--------ER-LYRYL-----VN-NGVIPGKV-LRPP-SSAVDPLWYIIGFIDGDG----WVEQVVK--RAGDKSYYY--------IRIGIKTK----S----KELRDWIA--QT-----LND-LGIRA-SRADK--S-----------DGYEVHI---DGVEAWRLV---------PHL--QNPTHLERAQSVKDNRLSLLF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 50.9413% -93 - C5 -1DFA - VATA_YEAST A:[204-398] ------------------------GPKVLA-YLLGLWIGDGLSDRA-------------------------------T--FSVDSRDT--SLMERVT----E----YA------EKL----------------------N---LCAEYK-----------------NTENPL-WDAIVG-LGFLK---------DGVKNIP-SFLSTDNIGTRETFLAGLIDSDG----YVTDE----H-------G--------IKATIKTI----H----TSVRDGLV--SL-----ARS-LGLVV-SVNAE--PAKVDMNGTKHKISYAIYM---SGGDVLLNV---------LSK--C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 Fugue 50.4416% -36 - C4 -4R6H MSME_BACSU A:[28-421] ---------ADTAKKTLTIY---STMSTDS-ERDTFRKLAAAFEKE-----H-----S-----D--------I----H--VSLHFPGN--DYENMMR----V----RMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWT---QDLDPNLNSILKNKSG-KVYAYPINQAK--DGLAYN-RNILDRYGIAPP-ETMDDFIK-ALRT-IKEKSKGSI--VPFWFAG----Y-DKSSF--A-------Q--------YYDQFATP----LLITDPAHNEKKQ--LINGTFQWSK-FTYLS-EILKQMQK-----------EKLINID---AVTAKKSQL---------IEL--MAQNKIAFTMQGGTLGQDVAQINPNVKVGII----------PTPAIHPGDDPIWIGGERYTLAA------WKDSPQLKE----AKDFIAFMARPANAK-QMAEATSLPSGLTNVKADIFYAND---YEYYQDVKVEPYFDRLYLPNGMWDVLG---TVGQELAADILAPQ-DIS-QKLGREYKRLREQSET
22 HHSearch 50.4116% -92 - C5 -1MOW DMO1_DESMO (first) A:[6-188] -----------------------NVSGISA-YLLGLIWGDGGLYKL-----KYKGNRS-----E--------Y----RVVITQKSEN---LIKQFIA----P----RMQFLI--DEL----------------------N---VKSKIQIVK-----GD-TRYELRVSSKKLYYYFANM-LER----------------I----RL-FNGNRFLAYLAGIVDGDG----SIIAQIK--P-------NQSYKFKHQLSLTFQVTQKTER----RWFLDKLV--DE-----IGV--G----YVRDR--G-----------SVSDYIL---SEIKPLHNF---------LTQ--L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 50.1815% -65 - C5 -2DCH ? X:[19-198] -----------------------SHMKVWD-YLCGLIAADGHLDEE-----G-------------------------Y--ITILQKDR--RFIDKIV----A----LLK-----SA-----------------------E---IKISSLFYD----KGA-GVWKIKVKDERL-YRYLVN-NGVIP-----GK-----VLRP-PSS---AVDPLW-YIIGFIDGDG----WVEQVVK--RAGDKSYYY--------IRIGIKTK----S----KELRDWIA--QT-----LND-LGIRA-SRADK--S-----------DGYEVHI---DGVEAWRLV---------PHL--QNP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 49.0313% -85 - C5 -2VS7 DMO1_DESMO A:[6-182] -----------------------NVSGISA-YLLGLIIGDGGLYKLKYKGNR-----S-----E--------Y----R--VVITQKSE--NLIKQHIAPLMQ----FLI-----DEL----------------------N---VKSKIQIVK-----GD-TRYELRVSSKKL-YYYFA--------------------NML-ERIRLFNMREQIAFIKGLYVAEG----DKTL-K---------------------RLRIWNK----N----KALLEIVS--RW-----LNN-LGVRN-TIHLD--DHRH--------GVYVLNI----SLRDRIKF---------VHT--ILSSHL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 46.2117% -4 * C6 *4BVA CRYM_MOUSE A:[24-334] KRAPAFLS-AEEVQDHLRSSSL-LIPPLEA-ALANFSKGPDG---------------------G--------V----M--QPVRTVVP--VAKHRGF----L----GVM-----PAY----------------------S---AAEDALTTKLVTFYES-HQASVLLFDPS--NG-------------------SLLAVMDGNVIT-AKRTAAVSAIATKLLKPP----GSDVLCI--L-------G--------AGVQAYSH----Y----EIFTEQF----S-----FKE-VRMWN-RTREN--A-----------EKFASTV---QGD---------------VRV--CSSVQEAVTGADVIITVTM----ATEPILFG----------EWVKPGAHIN-----------AVGASRPDWRELDDELM----RQAVLYVDSREAALK-ESGD-------VLLSGADI-FAEL---GEVISGAKPAHCEKTTVF-----KSLG---MAVEDLVAAK-LVY-DSW-SSG-------------
5 PsiBlast_PDB 45.8325% -23 - C5 -1SFF GABT_ECOLI A:[178-362] ---------------------I-SEDDAIA-SIHRIFKNDAAPEDI-----A-----A-----I--------V----I--EPVQGEGGFYASSPAFM----Q----RLR-----ALC----------------------D----------EHGIMLIAD-EVQSGAGRTGT--LFAMEQ-MGVAP-----DL-TTFAKSIA-GGFP-LAGVTGRAEVMDAVAPGGLGGTYAGNPIA--C-------V--------AALEVLKV----F----EQEN------LL-----QKA-NDLGQ-KL-----K-----------DGLLAI------AEKHPEI---------GDVRGLGAMIAIELFED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 Fugue 45.7415% -10 - C3 -4X2Z A:[9-309] ----QKTIYLTEDGVKYRSIVL-KPGDSLG-QFGQ-VYAKNKIVFT-----A-----D-----D--------VEDKEI--LYVPTTDK--SILEYY-----G----LDA-----QKY----------------------V---IYLQTLAQKWNVQYRD-NFLILEWRDGN--CWISSA-IVLLQ-----AAKIRFKGFLT-EAWA-KLLGGDPTDFVAWCYASC----TAKVGD--------------------------------F----SDANWLLA--NL-----AEH-FDAD------Y--T-----------NAFLKKR---VSCNCGIKS---------YEL--RGLEACIQPVRATN-LLHFKT--QYSNCPTC----------GANNTDEVIE-----------A------------SLPY----LLLFATDGPATVDCD-EDAV-------GTVVFVGST--NS---GHCYT--QAAGQAFDN-L-----AKDR---KFGK--KSPY-ITAMYTR-FAFKNETS--------
3 PsiBlast_PDB 45.5925% -25 - C5 -1SZS GABT_ECOLI A:[178-362] ---------------------I-SEDDAIA-SIHRIFKNDAAPEDI-----A-----A-----I--------V----I--EPVQGEGGFYASSPAFM----Q----RLR-----ALC----------------------D----------EHGIMLIAD-EVQSGAGRTGT--LFAMEQ-MGVAP-----DL-TTFAKSIA-GGFP-LAGVTGRAEVMDAVAPGGLGGTYAGNPIA--C-------V--------AALEVLKV----F----EQEN------LL-----QKA-NDLGQ-KL-----K-----------DGLLAI------AEKHPEI---------GDVRGLGAMIAIELFED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 45.2525% -24 - C5 -1SF2 GABT_ECOLI A:[178-362] ---------------------I-SEDDAIA-SIHRIFKNDAAPEDI-----A-----A-----I--------V----I--EPVQGEGGFYASSPAFM----Q----RLR-----ALC----------------------D----------EHGIMLIAD-EVQSGAGRTGT--LFAMEQ-MGVAP-----DL-TTFAKSIA-GGFP-LAGVTGRAEVMDAVAPGGLGGTYAGNPIA--C-------V--------AALEVLKV----F----EQEN------LL-----QKA-NDLGQ-KL-----K-----------DGLLAI------AEKHPEI---------GDVRGLGAMIAIELFED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 42.9018% -82 - C5 -2DCH - ? X:[23-100] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VWDYLCGLIAADG----HLDEE------------G---------YITILQK----D----RRFIDKIV--AL-----LKS-AEIKISSLFYDKGA-----------GVWKIKV---K-DERLYRY---------LVN--NGV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------