@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs0231: (2015-11-29 )
MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAICAIMCFLLSFIGDDKVMVYGLIVANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGIRITLIVDAITFLISFLFLYAIKVERVQLSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAIGSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFELPIWISYSGSFLFNSLLTMFNIHFFSQV
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------.........10....----....20........30..-.....--------------.40........50........60........70.......--.---80--.....-...--------90.--..----------------.-..------..100--.......----..110--.....----------..120...---....130-.....-...140...-....150.-----....--------------------------..160------........170.....-----..-180....------..--.190.-.....-...200.....-..210.......220.......230......---.240--.---------.-.-......250......---.260........270.---......280.......290.----....----..300--.......----.---310.......320......------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------MNIN
G
I
K
L
L
S
S
R
A
V
S
----
K
L
G
D
V
L
Y
DYGNS
T
W
I
A
SM-GG
L
G
Q
--------------
K
I
L
G
I
Y
Q
I
V
E
L
L
V
S
I
V
LNPF
G
G
A
L
A
D
R
F
QR
R
K
I
L
L
I
T
D
A
I
--
C
---
A
I
--
M
C
F
L
L
-
S
F
I--------GDD--
K
V
----------------
M
-
V
Y
------
G
L
I
----
V
A
N
A
I
L
A
----
V
S
NAF--SS
P
A
Y
----------
K
S
Y
I
P
E
I
V---DKA
D
I
I
--
T
YNA
N
-
L
E
T
I
V
Q
I
I
S-VSSP
V
L
G
F
-----
L
I
FN--------------------------NF
G
-
I
------
R
I
T
L
I
V
D
A
I
T
F
L
I
S
F
L
-----
F
L
-
Y
A
I
K
V
E
R
------
V
Q--LS--
K
-
Q
E
K
V
A
-
I
K
N
I
L
A
D
I
AD
G
-
F
T
Y
I
KKEK
E
I
M
F
F
L
I
I
A
A
L
L
N
T
F
L
A
M
F
N
Y
L
L
---
P
F
----
T
---------
N
-
S
-
L
L
KTSG
A
Y
A
T
I
L
S
I
S
---
A
I
-
G
S
I
I
G
A
L
I
A
R
K
I
K
---
S
S
I
N
S
M
L
S
M
L
V
F
S
SL
G
V
I
V
M----G
F
P
S
----LFEL---
P
I
W
I
SYS----
G
---
S
F
L
F
N
S
L
L
T
M
F
N
I
H
F
FSQV------------------------------------------------------------------------
22
Fugue
76.54
18%
-110
- C3 -
4QIQ
1
XYLE_ECOLI
A:
[7-470]
----------------------------------------------------------------------------------------
S
Y
I
F
S
I
T
L
V
A
----
T
L
G
G
L
L
F
G
Y
D
T
A
V
I
S
G
T
V
-
E
S
L
N
T
V
FVAPQNLS
E
S
A
A
N
S
L
L
G
F
C
V
A
S
A
L
I
G
C
I
I
G
G
A
L
G
G
Y
C
S
N
R
F
G
R
R
D
S
L
K
I
A
A
V
L
--
F
---
F
I
--
S
G
V
G
S
-
A
W
P
ELGFTSIN
P
D
N
--
T
V
----------------
P
-
V
Y
LAGY
V
P
E
F
V
----
I
Y
R
I
I
G
G
----
I
G
V
G
L
--
A
S
M
L
S
----------
P
M
Y
I
A
E
L
A
PAH
I
R
G
K
L
V
--
S
F
N
Q
F
-
A
I
I
F
G
Q
L
L
V
-
Y
C
V
N
Y
F
I
A
R
SGD
A
S
W
L
N
--------------------------
T
D
G
-
W
------
R
Y
M
F
A
S
E
C
I
P
A
L
L
F
L
M
-----
L
L
-
Y
T
V
P
E
S
P
------
R
W
--
L
M
--
T
-
L
A
T
Q
A
-
V
Q
E
I
K
H
S
L
D
R
L
-
L
M
F
G
V
G
V
I
V
I
G
V
M
L
S
I
F
Q
Q
F
-
V
G
I
N
V
V
L
Y
Y
A
---
P
E
----
V
F
K
T
L
GAS
T
D
I
-
A
-
L
L
Q
T
I
I
V
G
V
I
N
L
T
F
T
---
V
L
-
A
I
M
T
V
D
K
F
G
R
K
P
L
---
Q
I
I
G
A
L
G
M
A
I
G
M
F
S
L
G
T
A
F
Y
T
QAP
G
I
V
A
----
L
L
S
M
---
L
F
Y
V
A
A
F
A
M
SW
G
---
P
V
C
W
V
L
L
S
E
I
F
P
N
A
I
R
G
K
A
L
A
I
A
V
A
A
Q
W
L
A
N
Y
F
V
S
W
T
FPMMDKN
S
W
L
V
A
H
FHNGF
S
Y
W
I
Y
G
C
M
G
V
L
A
A
L
F
M
W
KFVPETKGKTL--------
23
Fugue
75.85
18%
-129
- C2 -
3WZM
1
?
A:
[15-278]
-------------------------------------------------------------------------------------------
M
R
T
R
S
T
I
----
S
T
P
N
------
G
I
T
W
Y
Y
E
Q
-
E
G
T
G
P
---------------------------------------------
D
V
V
L
V
P
D
G
L
GE
C
---
Q
M
--
F
D
S
S
V
-
S
Q
I
--------
A
A
Q
GF
R
V
----------------
T
-
T
F
------
D
M
P
GMSR
S
A
K
A
P
P
E
----
T
Y
T
E
V
--
T
A
Q
K
L
----------
A
S
Y
V
I
S
V
L
---
D
A
L
D
I
-------
K
-
H
A
T
V
W
G
C
A
S
-
G
A
S
T
V
V
A
L
-----
L
L
G
Y
--------------------------
P
D
R
-
I
------
R
N
A
M
C
H
E
L
P
T
K
L
L
D
H
L
-----
S
N
-
T
A
V
L
--------------------
E
D
E
E
-
I
S
K
I
L
A
N
V
M
L
N
-
D
V
S
G
G
S
E
A
W
Q
A
M
G
D
E
V
H
A
R
L
H
K
N
Y
P
V
W
A
R
G
Y
---
P
---------------------
R
T
I
P
P
S
A
P
V
K
D
L
E
---
A
L
R
G
K
P
L
D
W
T
V
G
A
A
-
T
---
P
T
E
S
F
F
D
N
I
V
T
A
T
K
A
G
V
N
I
G
----
L
L
P
G
----
M
H
-----
F
P
Y
V
S
H
P
----
D
---
V
F
A
K
Y
V
V
E
T
T
Q
K
H
L
-----------------------------------------------------------------------------
20
Fugue
75.49
12%
-132
- C3 -
2H7O
-
YPKA_YERPS
A:
[439-731]
------------------------------------------------------------------------------------------
R
I
T
P
K
K
L
R
----
E
L
S
D
L
L
R
T
H
L
S
S
A
A
T
K
Q
L
-
D
-
M
G
G
--------------
V
L
S
D
L
D
T
M
L
V
A
L
D
K
A
E
R
E
V
---------
D
K
D
Q
L
K
S
F
N
S
L
I
--
L
---
K
T
--
Y
R
V
I
E
-
D
Y
V
--------
K
G
N
--
F
M
----------------
L
-
S
---------
I
----
V
E
P
S
L
Q
R
----
I
Q
K
H
L
--
D
Q
T
H
----------------
S
F
S
---
D
I
G
S
L
V
--
R
A
H
K
H
-
L
E
T
L
L
E
V
L
V
-
T
L
S
Q
P
V
S
----------------------------------------------------------
S
E
T
Y
G
-----
F
L
-
N
R
L
A
E
A
K
------
I
T
--
L
S
--
Q
-
Q
L
N
-
T
-
L
Q
Q
Q
Q
E
S
A
K
A
Q
-
L
S
I
L
I
N
R
S
G
S
W
-----
A
D
V
A
R
Q
S
L
Q
R
F
D
S
T
R
---
P
V
----
V
---------
K
-
F
------
G
T
E
Q
Y
T
A
I
H
R
---
Q
M
-
M
A
A
H
A
A
I
T
L
Q
E
V
S
---
E
F
T
D
D
M
R
N
F
T
V
D
S
I
P
L
L
I
Q
L
----
G
R
S
S
----
L
M
D
E
---
H
L
V
E
Q
R
E
----
K
---
L
R
E
L
T
T
I
A
E
R
L
N
R
L
E
R
E
W
-------------------------------------------------------------------------
19
Fugue
67.01
13%
-100
- C3 -
1PV6
-
LACY_ECOLI
A:
[1-417]
-------------------------------------------------------------------------------MYYL
K
N
T
N
F
W
M
F
G
L
F
F
F
F
Y
----
F
F
I
M
G
A
Y
F
P
F
F
P
I
W
L
H
D
I
-
N
H
I
S
K
--------------
S
D
T
G
I
I
F
A
A
I
S
L
F
S
L
L
F
Q
P
L
F
G
L
L
S
D
K
L
G
L
R
K
Y
L
L
W
I
I
T
G
--
M
---
L
V
--
M
F
A
P
F
-
F
I
F
--------
I
F
G
--
P
L
----------------
L
-
Q
Y
------
N
I
L
----
V
G
S
I
V
G
G
----
I
Y
L
G
F
--
C
F
N
A
G
----------
A
P
A
V
E
A
F
I
---
E
K
V
S
R
R
SN
F
E
F
G
R
-
A
R
M
F
G
C
V
G
W
-
A
L
G
A
S
I
V
G
-----
I
M
F
T
--------------------------
I
-
N
-
N
------
Q
F
V
F
W
L
G
S
G
C
A
L
I
L
A
V
-----
L
L
-
F
F
A
K
T
D
A
------
P
S
--
S
A
--
T
-
V
A
N
A
V
-
G
A
N
H
S
A
F
S
L
K
L
-
A
L
E
L
F
R
Q
P
K
L
W
F
L
S
L
Y
V
I
G
V
S
C
T
Y
D
V
F
D
Q
Q
F
---
A
N
----
F
F
T
S
F
FAT
G
-
E
-
Q
-
G
T
R
V
F
G
Y
V
T
T
M
G
E
L
L
---
N
A
-
S
I
M
F
F
A
P
L
I
I
N
R
I
---
G
G
K
N
A
L
L
L
A
G
T
I
M
S
V
R
I
I
G
S
----
S
F
A
T
S
A
L
E
V
V
I
L
---
K
T
L
H
M
F
E
----
V
---
P
F
L
L
V
G
C
F
K
Y
I
T
S
Q
F
E
V
R
F
S
A
T
I
Y
L
V
CFCFF
K
Q
L
A
M
I
F
M
S
V
L
A
G
N
M
Y
E
S
IG
F
Q
G
A
Y
L
V
L
G
L
V
A
L
G
F
T
L
I
S
V
F
T
LSGPGPLS
L
L
R
R
Q
V
N
E
V
A
10
HHSearch
63.52
14%
-97
- C3 -
2CFQ
4
LACY_ECOLI
A:
[5-307]
-----------------------------------------------------------------------------------
K
N
T
N
F
W
M
F
G
L
F
F
F
F
Y
----
F
F
I
M
G
A
Y
F
P
F
F
P
I
W
L
H
D
I
-
N
H
I
S
K
--------------
S
D
T
G
I
I
F
A
A
I
S
L
F
S
L
L
F
Q
P
L
F
G
L
L
S
D
K
L
G
L
R
K
Y
L
L
W
I
I
T
G
--
M
L
V
M
F
A
--
P
F
F
I
F
-
I
F
--------------
G
P
----------------
L
L
Q
Y
------
N
I
L
----
V
G
S
I
V
G
G
IYLG
F
C
F
N
A
--
G
A
P
A
V
----------
E
A
F
I
E
K
V
S
---
R
--
R
S
N
--
F
E
F
G
R
-
A
R
M
F
G
C
V
G
W
-
A
L
G
A
S
I
V
G
-----
I
M
F
T
---------------------------
I
N
-
N
------
Q
F
V
F
W
L
G
S
G
C
A
L
I
L
A
V
-----
L
L
-
F
F
A
K
T
D
A
------
P
S
--
S
A
--
T
-
V
A
N
A
V
-
G
A
N
H
S
A
F
S
L
K
L
-
A
L
E
L
F
R
Q
P
K
L
W
F
L
S
L
Y
V
I
G
V
S
C
T
Y
D
V
F
D
Q
Q
F
A
--
N
F
F
T
S
F
F
---------
A
-
T
-
G
E
Q
G
T
R
V
F
G
Y
V
T
T
M
G
---
E
L
-
L
N
A
S
I
M
F
F
A
P
L
I
I
N
R
I
G
G
K
N
A
L
L
L
A
G
T
I
M
S
V
R
I
I
G
S
----
S
F
A
T
----
S
A
L
E
---
V
V
I
L
K
T
L
----
H
---
M
F
E
V
P
F
L
L
V
G
C
F
K
Y
I
T
S
Q
F
------------------------------------------------------------------------
27
Fugue
61.22
10%
-124
- C3 -
3N54
16
GERBC_BACSU
B:
[1-344]
------------------------------------------------------------------------------------
D
I
E
Q
L
S
F
A
R
G
L
A
I
D
----
E
T
N
D
--
H
Q
Y
K
L
T
Y
Q
N
L
L
P
-
Q
S
G
K
P
--------------
E
F
V
N
V
T
S
H
G
K
T
I
L
E
A
V
S
D
V
S
I
K
D
P
P
V
Y
S
D
H
L
K
V
I
L
L
G
E
K
L
--
M
---
R
N
QN
V
D
Q
V
L
-
N
H
F
--------
I
R
D
--
D
E
----------------
L
-
R
R
------
S
S
Y
----
L
M
A
A
R
G
N
----
A
A
D
V
F
--
T
K
G
N
P
----------
K
I
M
I
P
----------------
L
R
I
-
G
R
A
S
V
Y
S
Q
N
-
G
Y
S
Y
L
I
Q
A
-----
V
K
N
E
--------------------------
K
G
K
-
A
------
K
Y
D
-----------
G
A
-----
G
I
-
I
K
R
G
S
N
K
------
L
V
GF
L
S
--
A
-
D
E
T
Q
T
-
L
S
W
V
M
G
T
I
Q
G
G
-
V
M
P
T
T
D
K
G
H
P
I
T
F
E
I
K
K
S
K
T
K
I
K
P
V
I
E
N
G
K
P
---
V
F
----
H
---------
I
-
S
-
V
K
T
K
G
I
L
T
E
D
Q
N
F
S
K
---
S
Y
-
L
H
R
L
E
N
I
F
E
K
K
L
E
---
R
D
V
K
Q
V
M
D
K
L
Q
H
E
-
Y
K
T
D
P
V
----
F
L
S
D
----
H
I
R
I
QHP
D
Y
W
N
K
V
K
----
G
---
H
W
D
E
I
F
S
E
T
D
F
K
Y
D
I
S
F
K
I
IN----------------------------------------------------------------------
7
HHSearch
60.27
13%
-83
- C3 -
2GFP
-
EMRD_ECOLI
A:
[15-267]
--------------------------------------------------------------------------------------------
L
L
V
A
V
G
----
Q
M
A
Q
T
I
Y
I
P
A
I
A
D
M
A
R
D
L
-
N
V
-
R
E
--------------
G
A
V
Q
S
V
M
G
A
Y
L
L
T
Y
G
V
S
Q
L
F
Y
G
P
I
S
D
R
V
G
R
R
P
V
I
L
V
G
M
S
I
--
F
---
M
L
--
A
T
L
V
A
-
V
T
--------------
T
S
----------------
S
-
L
T
------
V
L
I
----
A
A
S
A
M
Q
G
----
M
G
T
G
V
--
G
G
V
M
A
----------
R
T
L
P
R
D
L
Y
---
E
R
T
Q
L
R
--
H
A
N
S
L
-
L
N
M
G
I
L
V
S
P
-
L
L
A
P
L
I
G
G
-----
L
L
D
T
--------------------------
M
W
N
-
W
------
R
A
C
Y
L
F
L
L
V
L
C
A
G
V
T
F
-----
S
M
-
A
R
W
M
P
E
T
------
R
P
--
V
D
------
A
------
P
R
T
R
L
L
T
S
-
Y
K
T
L
F
G
N
S
G
F
N
C
Y
L
L
M
L
I
G
G
L
A
G
I
A
A
F
E
A
C
S
---
G
V
L---
M
G--------
A
-
V
-
L
G
L
S
S
M
T
V
S
I
L
F
I
L
P
---
I
P
-
A
A
F
F
G
A
W
F
A
G
R
P
N
---
K
R
F
S
T
L
M
W
Q
S
V
I
C
C
L
L
A
G
L
L
----
M
W
I
P
----
D
W
F
G
---
V
M
N
V
W
T
L
----
L
---
V
P
A
A
L
F
F
F
G
A
G
M
L
F
P
L
A
T
S
------------------------------------------------------------------------
8
HHSearch
59.81
17%
-110
- C3 -
3WDO
-
?
A:
[11-178]
--------------------------------------------------------------------------------------
A
T
W
G
L
G
T
V
F
S
L
R
----
M
L
G
M
F
M
V
L
P
V
L
T
T
Y
G
M
A
L
-
Q
G
A
S
E
--------------
A
L
I
G
I
A
I
G
I
Y
G
L
T
Q
A
V
F
Q
I
P
F
G
L
L
S
D
R
I
G
R
K
P
L
I
V
G
G
L
A
V
--
F
---
A
A
--
G
S
V
I
A
-
A
L
--------------
S
D
----------------
S
-
I
W
------
G
I
I
----
L
G
R
A
L
Q
G
----
S
G
A
----
I
A
A
A
V
----------
M
A
L
L
S
D
L
T
---
R
E
Q
N
R
T
--
K
A
M
A
F
-
I
G
V
S
F
G
I
T
F
-
A
I
A
M
V
L
G
P
-----
I
I
T
H
--------------------------
K
L
G
-
L
------
H
A
L
F
W
M
I
A
I
L
A
T
T
G
I
A
-----
L
T
-
I
W
V
V
P
N
S
------
S
T
--
H
V
--
L
-
N
R
E
S
G
-
M
V
K
G
S
F
S
K
V
L
A
-
E
P
R
L
L
K
L
N
F
G
I
M
C
L
H
M
L
L
M
S
T
F
V
A
L
P
G
Q
L
A
D
---
A
G
----
F
---------
P
-
A
-
A
E
H
W
K
V
Y
L
A
T
M
L
I
A
F
---
G
S
-
V
V
P
F
I
I
Y
A
E
V
K
R
K
---
M
K
Q
V
F
V
F
C
V
G
L
I
V
V
A
E
I
V
L
W
----
N
A
Q
T
----
Q
F
W
Q
---
L
V
V
G
V
Q
L
----
F
---
F
V
A
F
N
L
M
E
A
L
L
P
S
L
I
S
K
E
S
------------------------------------------------------------------------
21
Fugue
54.19
18%
-111
- C3 -
1SED
9
YHAI_BACSU
A:
[4-115]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--------------------------
S
M
D
-
H
------
R
I
E
R
L
E
Y
Y
I
Q
L
L
V
K
T
V
DMDRY
P
F
-
Y
A
L
L
I
D
K
-------
G
--
L
S
--
K
-
E
E
G
E
A
-
V
M
R
I
C
D
E
L
S
E
E
-
L
A
T
Q
K
A
Q
G
F
V
T
F
----
D
K
L
L
A
L
F
A
G
Q
L
N
E
K
L
---
D
V
----
H
---------
E
-
T
-
I
F
A
L
Y
E
Q
G
L
Y
Q
E
L
M
E
---
V
F
-
I
D
I
M
K
H
F
D
---------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
53.58
15%
-100
- C3 -
3O7Q
-
FUCP_ECOLI
A:
[279-422]
--------------------------------------------------------------------------------------------------------------
S
Y
L
I
R
Y
A
V
E
E
I
P
G
M
T
A
--------------
G
F
A
A
N
Y
L
T
G
T
M
V
C
F
F
I
G
R
F
T
G
T
W
L
I
S
R
F
A
P
H
K
V
L
A
A
Y
A
L
I
--
A
---
M
A
--
L
C
L
I
S
-
A
F
--------------
A
G
----------------
G
-
H
V
------
G
L
-----
I
A
L
T
L
C
S
----
A
F
M
S
I
--
Q
Y
P
T
I
----------
F
S
L
G
I
K
N
L
---
G
Q
D
T
K
---
Y
G
S
S
F
-
I
-
V
M
T
I
I
G
G
-
G
I
V
T
P
V
M
G
-----
F
V
S
D
--------------------------
A
A
G
N
I
------
P
T
A
E
L
I
P
A
L
C
F
A
V
I
F
I
-----
F
A
-
R
F
R
S
Q
T
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
53.45
11%
-100
- C3 -
3O7Q
1
FUCP_ECOLI
A:
[34-319]
---------------------------------------------------------------------------------------------
L
F
F
L
W
----
A
V
A
N
N
L
N
D
I
L
L
P
Q
F
Q
Q
A
F
-
T
L
-
T
N
--------------
F
Q
A
G
L
I
Q
S
A
F
Y
F
G
Y
F
I
I
P
I
P
A
G
I
L
M
K
K
L
S
Y
K
A
G
I
I
T
G
L
F
L
--
Y
---
A
L
--
G
A
A
L
F
-
W
P
A
--------
A
-
E
--
I
M
----------------
N
-
Y
T
------
L
F
L
----
V
G
L
F
I
I
A
----
A
G
L
G
C
--
L
E
T
A
A
----------
N
P
F
V
T
V
L
G
---
P
E
S
S
G
H
--
F
R
L
N
L
-
A
Q
T
F
N
S
F
G
A
-
I
I
A
V
V
F
G
Q
-----
S
L
I
L
SNVPHQS
Q
D
V
L
D
K
MS
P
E
Q
L
S
A
Y
K
H
S
L
V
L
S
-
V
------
Q
T
P
Y
M
I
I
V
A
I
V
L
L
V
A
L
-----
L
I
-
M
L
T
K
F
P
A
------
L
Q
---
S
--
D
--
N
H
---
S
D
A
K
Q
G
S
F
S
A
S
-
L
S
R
L
A
R
I
R
H
W
R
W
A
V
L
A
Q
F
C
Y
V
G
A
Q
T
A
C
W
S
Y
L
I
--
R
Y
----
A
V
--------
E
-
E
I
P
G
M
T
A
G
F
A
A
N
Y
L
T
G
T
---
M
V
-
C
F
F
I
G
R
F
T
G
T
W
L
I
---
S
R
F
A
P
H
K
V
L
A
A
Y
A
L
I
A
M
A
L
C
----
L
I
S
A
----
F
A
G
G
---
H
V
G
L
I
A
L
----
T
---
L
C
S
A
F
M
S
I
Q
Y
P
T
I
F
S
L
G
I
K
------------------------------------------------------------------------
6
PsiBlast_PDB
52.93
25%
-159
- C4 -
2VEQ
1
CBF3B_YEAST
A:
[376-448]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
I
Y
Y
D
T
-
A
D
S
L
L
K
V
I
H
-
Y
S
K
V
I
I
S
------
L
I
V
N
--------------------------
N
F
H
-
A
KSEFFN
R
H
P
M
V
M
Q
T
I
T
R
V
V
S
F
I
-----
S
F
-
Y
Q
I
F
V
-------------------
E
S
A
A
-
V
K
Q
L
L
V
D
L
T
E
L
-
T
A
N
L
P
T
I
F
G
S
K
L
D
K
L
V
Y
L
T
E
R
L
S
K
L
K
L
L
W
D
K
---
V
Q
----
L
---------
L
-
D
-
S
G
D
S
F
Y
H
P
V
F
K
I
L
Q
N
---
D
I
-
K
I
I
E
L
K
N
D
E
M
F
S
L
---
I
K
G
L
G
S
L
V
P
L
N
S
D
F
R
T
I
V
E
E
----
F
Q
S
E
----
Y
N
I
S
---
D
I
L
S
------------------------------------------------------------------------------------------------------
26
Fugue
52.31
11%
-117
- C3 -
4GC0
5
XYLE_ECOLI
A:
[5-479]
YNS
S
Y
I
F
S
I
T
L
V
A
T
L
G
G
L
L
F
G
Y
D
T
A
VISGT
V
E
S
L
N
T
V
FVAPQNLS
E
S
A
A
N
S
L
L
G
F
C
V
A
S
A
L
I
G
C
I
I
G
G
A
L
G
G
Y
C
S
N
R
FG
R
R
D
S
L
K
I
A
A
V
L
F
F
I
S
G
V
G
S
A
WPE
L
G
F
T
S
I
N
P
D
N
T
V
P
V
Y
L
A
G
-
Y
V
P
E
F
--------------
V
I
Y
R
I
I
G
G
I
G
V
G
L
A
S
M
L
S
P
M
Y
I
A
E
L
A
P
A
H
I
R
G
K
L
V
S
F
N
Q
F
--
A
---
I
I
--
F
G
Q
L
L
-
V
Y
C
--------
V
N
Y
--
F
I
A
R
S
GD
A
S
W
L
N
T
D
G
W
R
Y
M
-
F
A
------
S
E
C
----
I
P
A
L
L
F
L
----
M
L
L
Y
T
VP
E
S
P
R
W
L
M
S
R
GK
Q
E
Q
A
E
G
I
L
R
K
I
M
---
G
N
T
L
A
T
--
Q
A
V
Q
E
-
I
K
H
S
L
D
H
G
R
-
K
T
G
G
R
L
L
M
-----
F
G
V
G
--------------------------
V
I
V
-
I
------
G
V
M
L
S
I
F
Q
Q
F
V
G
I
N
V
V
-----
L
Y
-
Y
A
P
E
V
F
K
T
L
GAS
T
D
I
--
A
L
--
L
-
Q
T
I
I
V
-
G
V
I
N
L
T
F
T
V
L
A
-
I
M
T
V
D
K
F
G
R
K
P
L
Q
I
I
G
A
L
G
M
A
I
G
M
F
S
L
G
T
A
F
Y
T
Q
A
P
----
G
---------
I
-
V
-
A
L
L
S
M
L
F
Y
V
A
A
F
A
M
S
WG
P
V
C
-
W
V
L
L
S
E
I
F
P
N
A
I
R
---
G
K
A
L
A
I
A
V
A
A
Q
W
L
A
N
Y
F
V
S
W
----
T
F
P
M
----
M
D
K
N
---
S
W
L
V
A
H
F
----
H
NG
F
S
Y
W
I
Y
G
C
M
G
V
L
A
A
L
F
M
W
K
F
VPETKGKTLEELEALWE-------------------------------------------------------
11
HHSearch
52.22
11%
-94
- C3 -
1PW4
-
GLPT_ECOLI
A:
[44-313]
--------------------------------------------------------------------------------------------------------
V
R
K
N
F
A
L
A
M
P
Y
L
-
V
E
Q
--
G
F
S
R
--------------
G
D
L
G
F
A
L
S
G
I
S
I
A
Y
G
F
S
K
F
I
M
G
S
V
S
D
R
S
N
P
R
V
F
L
P
A
G
L
I
L
--
A
---
A
A
--
V
M
L
F
M
-
G
F
V
--------
P
W
A
--
T
S
----------------
S
-
I
A
------
V
M
F
----
V
L
L
F
L
C
G
----
W
F
Q
G
M
--
G
W
P
P
C
----------
G
R
T
M
V
H
W
W
---
S
Q
K
E
R
G
--
G
I
V
S
V
-
W
N
C
A
H
N
V
G
G
-
G
I
P
P
L
L
F
L
-----
L
G
M
A
W-------------------------
F
N
D
-
W
------
H
A
A
L
Y
M
P
A
F
C
A
I
L
V
A
L
-----
F
A
F
A
M
M
R
D
T
P
------
Q
S
--
C
G
LP
P
I
E
E
Y
K
N
D------
T
A
K
Q
I
F
M
Q
Y
V
L
P
N
K
L
L
W
Y
I
A
I
A
N
V
F
V
Y
L
L
R
Y
G
I
L
D
W
S
---
P
T
Y---
L
---------
K
E
V
-
K
H
F
A
L
D
K
S
S
W
A
Y
F
L
Y
---
E
Y
-
A
G
I
P
G
T
L
L
C
G
W
M
S
---
D
K
V
F
R
G
N
R
G
A
T
G
V
F
F
M
T
L
V
T
----
I
A
T
I
----
V
Y
W
M
---
N
P
A
G
N
P
T
----
V
---
D
M
I
C
M
I
V
I
G
F
L
I
Y
G
P
V
M
L
I
------------------------------------------------------------------------
5
PsiBlast_PDB
52.20
25%
-148
- C4 -
2QUQ
-
CBF3B_YEAST
A:
[419-491]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
--
I
Y
Y
D
T
-
A
D
S
L
L
K
V
I
H
-
Y
S
K
V
I
I
S
------
L
I
V
N
--------------------------
N
F
H
-
A
KSEFFN
R
H
P
M
V
M
Q
T
I
T
R
V
V
S
F
I
-----
S
F
-
Y
Q
I
F
V
-------------------
E
S
A
A
-
V
K
Q
L
L
V
D
L
T
E
L
-
T
A
N
L
P
T
I
F
G
S
K
L
D
K
L
V
Y
L
T
E
R
L
S
K
L
K
L
L
W
D
K
---
V
Q
----
L
---------
L
-
D
-
S
G
D
S
F
Y
H
P
V
F
K
I
L
Q
N
---
D
I
-
K
I
I
E
L
K
N
D
E
M
F
S
L
---
I
K
G
L
G
S
L
V
P
S
D
F
R
T
I
V
E
E
F
Q
----
S
E
Y
N
----
I
S
D
I
---
L
S
--------------------------------------------------------------------------------------------------------
13
HHSearch
49.16
15%
-112
- C3 -
2CFQ
4
LACY_ECOLI
A:
[257-392]
----------------------------------------------------------------------------------------------------------------------------
G
T
--------------
R
V
F
G
Y
V
T
T
M
G
E
L
L
N
A
S
I
M
F
F
A
P
L
I
I
N
R
I
G
G
K
N
A
L
L
L
A
G
T
I
--
M
---
S
V
--
R
I
I
G
S
-
S
F
--------------
A
T
----------------
S
-
A
L
------
E
V
V
----
I
L
K
T
L
H
M
----
F
E
V
P
F
--
L
L
V
G
C
----------
F
K
Y
I
T
S
Q
F
---
E
V
R
F
S
A
--
T
I
Y
L
V
C
F
C
F
F
K
Q
L
A
M
-
I
F
M
S
V
L
A
G
-----
N
M
Y
E
--------------------------
S
I
G
-
F
------
Q
G
A
Y
L
V
L
G
L
V
A
L
G
F
T
L
-----
I
S
-
V
F
T
L
S
G
P
------
G
P
--
L
S
--
L
-
L
R
R
Q
V
-
N
E
V
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
44.22
8%
-93
- C3 -
1PW4
-
GLPT_ECOLI
A:
[262-430]
----------------------------------------------------------------------------------------------
N
V
F
V
----
Y
L
L
R
Y
G
I
L
D
W
S
P
T
Y
L
K
E
V
-
K
H
F
A
L
--------------
D
K
S
S
W
A
Y
F
L
Y
E
Y
A
G
I
P
G
T
L
L
C
G
W
M
S
D
K
V
F
R
G
N
R
G
A
T
G
V
F
F
--
M
---
T
L
--
V
T
I
A
T
I
V
Y
W
--------
M
N
P
--
A
G
----------------
N
-
P
T
------
V
D
M
----
I
C
M
I
V
I
G
----
F
L
I
Y
G
--
P
V
M
L
I
----------
G
L
H
A
L
E
L
A
---
P
K
K
A
A
G
--
T
A
A
G
F
-
T
G
L
F
G
Y
L
G
G
S
V
A
A
S
A
I
V
G
-----
Y
T
V
D
--------------------------
F
F
G
-
W
------
D
G
G
F
M
V
M
I
G
G
S
I
L
A
V
I
-----
L
L
-
I
V
V
M
I
G
E
------
K
R
--
R
H
--
E
-
Q
L
L
Q
E
-
L
V
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
44.16
26%
236
- C3 -
1BB1
1
?
A:
[4-34]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
------
I
A
--
A
I
--
E
-
Y
E
Q
A
A
-
I
K
E
E
I
A
A
I
K
D
K
-
I
A
A
I
K
E
Y
I
A
A
I
N
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
39.87
28%
-59
- C4 -
1JQO
-
CAPP1_MAIZE
A:
[840-906]
---------------------------------------------------------------------------------------------------------------------------------------------
I
A
G
L
Y
D
--
E
L
L
V
A
E
E
L
K
P
F
G
K
Q
L
R
D
K
Y
V
E
T
Q
Q
L
L
L
Q
-------------
I
A
G
H
K
-
D
I
L
--------
E
G
D
--
P
F
----------------
L
-
K
Q
------
G
L
V
----
L
R
N
P
Y
I
T
----
T
L
N
V
F
--
Q
A
Y
T
L
----------
K
R
I
R
D
P
N
F
---
K
V
T
P
Q
P
--
P
L
S
K
E
-
A
G
L
V
K
L
N
P
A
-
S
E
Y
P
P
G
L
E
-----
D
T
L
I
--------------------------
L
T
M
-
K
------
G
I
A
A
G
M
Q
N
T
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
37.54
28%
-51
- C4 -
4UOL
-
CAPP1_MAIZE
A:
[806-872]
---------------------------------------------------------------------------------------------------------------------------------------------
I
A
G
L
Y
D
--
E
L
L
V
A
E
E
L
K
P
F
G
K
Q
L
R
D
K
Y
V
E
T
Q
Q
L
L
L
Q
-------------
I
A
G
H
K
-
D
I
L
--------
E
G
D
--
P
F
----------------
L
-
K
Q
------
G
L
V
----
L
R
N
P
Y
I
T
----
T
L
N
V
F
--
Q
A
Y
T
L
----------
K
R
I
R
D
P
N
F
---
K
V
T
P
Q
P
--
P
L
S
K
E
-
F
A
D
E
A
G
L
V
K
-
L
N
P
A
S
E
Y
P
-----
P
G
L
E
--------------------------
D
T
L
-
I
------
L
T
M
K
G
I
A
A
G
M
Q
N
T
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------