@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0256: (2015-11-29 )
MTKYIKADRFFYADHVKENGYLEIKDNHFGKWIENISGQEEILDYSGYQIAPGLVDTHIHGFAGADVMDCDSEGILRMSAGLLSTGVTSFLPTTLTSDTKRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMRNPNLEEFAQWQKAAKGLITKIALAPEREGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEWGIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHLDLVATYLDGEKRWQS

Atome Classification :

(20 SA) .........10....-.----....20........30.....---.---..-------40........50........60....--.-----------.--------..-----------70.----..-----.----.-....80........90.......----.-100.......110--.--......120.......130.....---------------..140...-..--..150.......---160---........-----------.170.------...-.....180.......190.......200....-...210-........220.......230.......240.......250....--...260.----.....----..270.......280.......290.....----..----300.....---..-310.......320--.------------.-----.....330.......340.......350.......360....----------.----------------------..370.......380
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTKYIKADRF-FYAD-H----VKENGYLEIKDNHFGKWIENI---S---GQ-------EEILDYSGYQIAPGLVDTHIHGFAGA--D-----------V--------MD-----------C-D----SE-----G----I-LRMSAGLLSTGVTSFLPTTLTSD----T-KRLEEASKSVAAV--A--GKEQGAKIQGIYFEGPYFTEEYKG---------------AQNPIYMR-NP--NLEEFAQWQKAA---K-----GLITKIAL-----------AP--E------REG-VEEFVSAITKQGVTVALGHSNGTYKEAKKAVK-AGASV--WVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACD--ILMT-QK----GHNHV----ALITDCMAAGGAPDGDYMLGELPVVVSNGT----AR----LKDGGNLA---GS-ILKLKDGLKNVVE--W------------G-----IATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKH----------L----------------------DLVATYLDGEKRWQS
1 PsiBlast_PDB 97.0333% -80 - C1 -2VHL NAGA_BACSU A:[7-384] ----IKDIAI-VTEN-E----VIKNGYVGIND---GK-ISTV---S---TERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGA--D-----------T--------MD-----------A-S----FS-----T----L-DIMSSRLPEEGTTSFLATTITQEHGNIS-QALVNAREWKAAE--E--SSLLGAELLGIHLEGPFVSPKRAG---------------AQPKEWIR-PS--DVELFKKWQQEA---G-----GLIKIVTL-----------AP--E------EDQ-HFELIRHLKDESIIASMGHTDADSALLSDAAK-AGASH--MTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAK--LAFL-AK----GSSKL----ILITDSMRAKGLKDGVYEFGGQSVTVRGRT----AL----LSD-GTLA---GS-ILKMNEGARHMRE--F------------T-----NCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD----------C----------------------EVILTICRGNIAFIS
21 PsiBlast_CBE 96.4233% -77 - C1 -2VHL NAGA_BACSU B:[7-384] ----IKDIAI-VTEN-E----VIKNGYVGIND---GK-ISTV---S---TERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGA--D-----------T--------MD-----------A-S----FS-----T----L-DIMSSRLPEEGTTSFLATTITQEHGNIS-QALVNAREWKAAE--E--SSLLGAELLGIHLEGPFVSPKRAG---------------AQPKEWIR-PS--DVELFKKWQQEA---G-----GLIKIVTL-----------AP--E------EDQ-HFELIRHLKDESIIASMGHTDADSALLSDAAK-AGASH--MTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAK--LAFL-AK----GSSKL----ILITDSMRAKGLKDGVYEFGGQSVTVRGRT----AL----LSD-GTLA---GS-ILKMNEGARHMRE--F------------T-----NCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD----------C----------------------EVILTICRGNIAFIS
75 HHSearch 91.3031% -80 - C1 -1O12 ? A:[13-375] --MIVEKVLI-VDPIDG----EF-TGDVEIEEGKIVKVEKRE--------------------CIPRGVLMPGFVDPHIHGVVGA--D-----------T--------MN-------------------C-----D----F-SEMEEFLYSQGVTTFLATTVSTS----L-EKMKEILRKARDY--I--LENPSTSLLGVHLEGPYISKEKKG---------------AHSEKHIR-PP--SERELSEI-------D-----SPAKMLTF-----------AP--E------IES-SEL-LLRLVKRDIVLSAGHSIATFEEFMKFYK-EGVKR--ITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREMVK--LVYK-VK----KANGIVLVTDSISAAGLKDGTT----TLGDLVVKVKDGV----PR-----LEDGTLA---GS-TLFFSQAVKNFRK--F------------T-----GCSITELAKVSSYNSCVELGLD-DRGRIAEGTRADLVLLDED----------L----------------------NVVMTIKEGEVVFRS
72 HHSearch 90.1829% -59 - C1 -2VHL NAGA_BACSU A:[3-389] ESLLIKDIAI-VTEN-E----VIKNGYVGINDGKISTVSTER---PKEPYS-------KEIQAPADSVLLPGMIDIHIHGGYGA--D-----------T--------MD-----------A-S----FS-----T----L-DIMSSRLPEEGTTSFLATTITQE----H-GNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAG---------------AQPKEWIR-PS--DVELFKKWQQEA---G-----GLIKIVTL-----------AP--E------EDQHFELIRHLKDESIIASM-GHTDADSALLSDAAK-AGASH--MTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAK--LAFL-AKGS--SKLIL----IT-DSMR-AKGLKDGV------YEFGGQSVTVRGRT----ALLSDGTLA--GS-ILKMNEGARHMRE--F------------T-----NCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSD----------C----------------------EVILTICRGNIAFIS
23 PsiBlast_CBE 89.7033% -79 - C1 -3IV8 NAGA_VIBCH C:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGPYLNVMKKG---------------IHSVDFIR--P--SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EMDYFIFVGKKVYYRDG----KC----VDENGTLG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQN-
73 HHSearch 88.9229% -72 * C1 *3IV8 NAGA_VIBCH A:[3-381] AMYALTNCKI-YTGN-D----VLVKHAVIINGDKIEAVCPIESL-P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------ND-----------EIT----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY-----QAKYPNQSLGLHLEGPYLNVMKKG---------------IHSVDFIR-P---SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK-----GEKL----VLVTDATAPAGAEMDYFIFVGKKVYYRDGK-----C----VDENGTLG---GS-ALTMIEAVQNTVE--H------------V-----GIALDEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQN-
2 PsiBlast_PDB 88.7634% -84 - C1 -1O12 ? A:[53-375] --------------------------------------------------------------------LMPGFVDPHIHGVVGA--D-----------T--------MN-----------C-D----------------F-SEMEEFLYSQGVTTFLATTVSTS----L-EKMKEILRKARDY--I--LENPSTSLLGVHLEGPYISKEKKG---------------AHSEKHIR-PP--SERELSEIDSPA---K-----ML----TF-----------AP--E------IES--SELLLRLVKRDIVLSAGHSIATFEEFMKFYK-EGVKR--ITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREMVK--LVYK-VK----KANGI----VLVTDSISAAGLKDGTTTLGDLVVKVKDGV----PR----LED-GTLA---GS-TLFFSQAVKNFRK--F------------T-----GCSITELAKVSSYNSCVELGLDDR-GRIAEGTRADLVLLDED----------L----------------------NVVMTIKEGEVVFRS
4 PsiBlast_PDB 88.7433% -77 - C1 -3IV8 NAGA_VIBCH A:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGPYLNVMKKG---------------IHSVDFIR--P--SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EMDYFIFVGKKVYYRDG----KC----VDENGTLG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQN-
22 PsiBlast_CBE 88.6533% -83 - C1 -3IV8 NAGA_VIBCH D:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGPYLNVMKKG---------------IHSVDFIR--P--SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EM-------------------------------LG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQN-
3 PsiBlast_PDB 88.3433% -80 - C1 -3EGJ NAGA_VIBCH A:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGPYLNVMKKG---------------IHSVDFIR--P--SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EMDYFIFVGKKVYYRDG----KC----VDENGTLG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQ--
24 PsiBlast_CBE 88.0833% -78 - C1 -3IV8 NAGA_VIBCH B:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGPYLNVMKKG---------------IHSVDFIR--P--SDDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EMDYFIFVGKKVYYRDG----KC----VDENGTLG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQN-
25 PsiBlast_CBE 87.9533% -87 - C1 -3EGJ NAGA_VIBCH B:[37-377] --------------------------------------IESL---P---SE-------MNVVDLNGANLSPGFIDLQLNGCGGV--M-----------F--------NDE----------I-T----AE-----T----I-DTMHKANLKSGCTSFLPTLITSS----D-ENMRQAIAAAREY--Q--AKYPNQSL-GLHLEGP-------------------------------------DDTMIDTICAN---S-----DVIAKVTL-----------AP--E------NNK--PEHIEKLVKAGIVVSIGHTNATYSEARKSFE-SGITF--ATHLFNAMTPMVGREPGVVGAIYDTPEVYAGIIADGFHVDYANIR--IAHK-IK----GEKLV-----LVTDATAPAGA-EMDYFIFVGKKVYYRDG----KC----VDENGTLG---GS-ALTMIEAVQNTVE--HV-----------G-----IAL-DEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVFDRD----------F----------------------NVKATVVNGQYEQ--
74 HHSearch 85.5626% -81 - C1 -1YRR NAGA_ECOLI A:[1-381] -MYALTQGRI-FTGH-E----FLDDHAVVIADGLIKSVCPVA---ELP-PE-------IEQRSLNGAILSPGFIDVQLNGCGGV--Q-----------F--------ND-----------T-AEAVSVE-----T----L-EIMQKANEKSGCTNYLPTLITTS----D-ELMKQGVRVMREY--L--A-KHPNQALGLHLEGPWLNLVKK----------------THNPNFVR-KP---DAALVDFLCEN---A-----DVITKVTL-----------AP--E------MV--PAEVISKLANAGIVVSAGHSNATLKEAKAGFR-AGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR--NAKR-LK----G-DKL----CLVTDATAPA--------GANIEQFIFAGK----TIYYRNGLCVDENGTLSGS-SLTMIEGVRNLVE--H------------C-----GIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPD----------F----------------------KITKTIVNGNEVVTQ
7 PsiBlast_PDB 85.2429% -80 - C1 -2P50 NAGA_ECOLI A:[47-378] ----------------------------------------------------------------NGAILSPGFIDVQLNGCGGV--Q-----------F--------NDTAEA-------V-S----VE-----T----L-EIMQKANEKSGCTNYLPTLITTS----D-ELMKQGVRVMREY--L--AKHPNQAL-GLHLEGPWLNLVKKG---------------THNPNFVR-KP--D-AALVDFLCEN---A-----DVITKVTL-----------AP--E------MVP-AE-VISKLANAGIVVSAGHSNATLKEAKAGFR-AGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR--NAKR-LK----G-DKL----CLVTDATAPAGANIEQFIFAGKTIYYRNGL----C-----VDENGTLS---GS-SLTMIEGVRNLVEH-C------------G-----IAL-DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPD----------F----------------------KITKTIVNGNEVVTQ
5 PsiBlast_PDB 84.5329% -89 - C1 -1YMY - NAGA_ECOLI A:[47-378] ----------------------------------------------------------------NGAILSPGFIDVQLNGCGGV--Q-----------F--------NDTAEA-------V-S----VE-----T----L-EIMQKANEKSGCTNYLPTLITTS----D-ELMKQGVRVMREY--L--AKHPNQAL-GLHLEGPWLNLV---------------------PNFVR-KP--D-AALVDFLCEN---A-----DVITKVTL-----------AP--E------MVP-AE-VISKLANAGIVVSAGHSNATLKEAKAGFR-AGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR--NAKR-LK----G-DKL----CLVTDATAPAGANIEQFIFAGKTIYYRNGL----C-----VDENGTLS---GS-SLTMIEGVRNLVEH-C------------G-----IAL-DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPD----------F----------------------KITKTIVNGNEVVTQ
8 PsiBlast_PDB 84.4329% -81 - C1 -2P53 NAGA_ECOLI A:[47-378] ----------------------------------------------------------------NGAILSPGFIDVQLNGCGGV--Q-----------F--------NDTAEA-------V-S----VE-----T----L-EIMQKANEKSGCTNYLPTLITTS----D-ELMKQGVRVMREY--L--AKHPNQAL-GLHLEGPWLNLVKKG---------------THNPNFVR-KP--D-AALVDFLCEN---A-----DVITKVTL-----------AP--E------MVP-AE-VISKLANAGIVVSAGHSNATLKEAKAGFR-AGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR--NAKR-LK----G-DKL----CLVTNATAPAGANIEQFIFAGKTIYYRNGL----C-----VDENGTLS---GS-SLTMIEGVRNLVEH-C------------G-----IAL-DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPD----------F----------------------KITKTIVNGNEVVTQ
6 PsiBlast_PDB 83.7529% -86 - C1 -1YRR NAGA_ECOLI A:[47-378] ----------------------------------------------------------------NGAILSPGFIDVQLNGCGGV--Q-----------F--------NDTAEA-------V-S----VE-----T----L-EIMQKANEKSGCTNYLPTLITTS----D-ELMKQGVRVMREY--L--AKHPNQAL-GLHLEGPWLNLVKK----------------THNPNFVR-KP--D-AALVDFLCEN---A-----DVITKVTL-----------AP--E------MVP-AE-VISKLANAGIVVSAGHSNATLKEAKAGFR-AGITF--ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIR--NAKR-LK----G-DKL----CLVTDATAPAGANIEQFIFAGKTIYYRNGL----C-----VDENGTLS---GS-SLTMIEGVRNLVEH-C------------G-----IAL-DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPD----------F----------------------KITKTIVNGNEVVTQ
92 HHSearch 65.5319% -58 - C1 -3HPA ? A:[30-451] -TLLVKHADVLVTMD-DTRR-ELRDAGLYIEDNRIVAVGPSA---ELPETA-------DEVLDLRGHLVIPGLVNTHHHMYQSLTRA-----------VPAAQNAELFGWLTNLYKIWAHL-T----PE-----MIEVST-LTAMAELLQSGCTTSSDHLYIYP----NGSRLDDSIGAAQ---------RIGMRFH---ASRGAMS----------------------------EPD--ILRDTQRLIETY---HDEGRYAMLRV-VV-----------AP--CSPFSVSRDL-MRDAAVLAREYGVSLHT-HLAENVNDIAY-------TP--AEYAED-L--------GWVG--------HDVWHAHCVQLDDAGIG--LFAR-TG----TGVAH----CPCSNMRLASGI-------APVKKMRLAGV----PV----GLGVDGSA---SNDGAQMVAEVRQALLLQR------------VGFGPDAMTAREALEIATLGGAKVLNRD-DIGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCAPS------------QTAYTVVNGKVVVRE
82 HHSearch 64.7819% -48 - C1 -2QS8 ? A:[8-411] -KTLIHAGKL-IDGK-SDQ--VQSRISIVIDGNIISDIKKGFISSN---DF-------EDYIDLRDHTVLPGLMDMHVHFGQEY--QSKA--------Q--------AP-----------I-K----VEREMQAI----LATQHAYVTFKSGFTTVRQVGDSGL----VAISLRDAINSGK---------LAGPRIF---AAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVN-GPYEVYAAVRQRYKDG---A-----DGIKITVTGGVLSVAKSGQNPQFT------QEE-VDAVVSAAKDYGMWVAV-HAHG-AEGMKRAIK-AGVDS--IEHGTF-MDL----------------EAMDLMIENGTYYVPTISAGEFVAEKSKIDNFFPEIV----RPKAA---SV----GPQISDTFRKAYEKGV----KI----AFGTDAGV---QK-HGTNWKEFVYMVE---------------N-----GMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGN----------PIEDISVLE--------------NVDVVIKDGLLYEG-
77 HHSearch 64.3715% -60 - C1 -2I9U ? A:[10-427] -LKIFKGNLI-FTKT-SDKFTIMKDSYIVVIDGKIASVSSNL---PDKYKG-------NPIIDFRNNIIIPGMNDLHAHASQYK--NLGIGMDKELLPW--------LNNYTFPEEAKF-L-N----VD-----YAKKTY-GRLIKDLIKNGTTRVALFATLH-----K-DSTIELFNMLIK---------SGIGAY---VGKVNMDYNCPD---------------YLTENYI---T--SLNDTEEIILKYKDKS-----NIVKP-II-----------TP--RFVPSCSNEL-MDGLGKLSYKYRLPVQS-HLSENLDEIAVVKSLHKKSNFYGEVYD---------KFGLFGN-------TPTLMAHCIHSSKEEIN--LIKR-NN----VTIVH----CPTSNFNLGSGMM-------PVRKYLNLGI----NV----VLGSDISA---GH-TCSLFKVIAYAIQ--NSKIKWQESGKKDM-----FLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDS----------NLYPEDYDLTERLERFIYLGDDRNIMKRYVCGNEIF--