@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0448: (2015-12-01 )
MNVVLKQRIPLKIKRMGINGEGIGFYKKTLIFVPGALKGEEVFCQISSVRRNFAEAKLLKINKKSKNRVDPACSIYKECGGCQIMHLQYDKQLEFKTDVIRQALMKFKPEGYENYEIRKTIGMSEPEHYRAKLQFQVRSFGGNVRAGLYAQGTHRLIDIKDCLVQDSLTQEMINRVAELLGKYKLPIYNERKIAGVRTVMIRRAQASGEVQLIFITSKRLDFDDVVIELVREFPELKTVAVNINASKTSDIYGQITEVIWGQESINEEVLDYGFSLSPRAFYQLNPKQTQILYSEAVKALDVKEDDDLIDAYCGVGTIGLAFAGKVKSVRGMDIIPEAIQDAKENALHMGFTNTHYEAGKAEDVIPRWYSEGFRANALIVDPPRTGLDDKLLNTILKMPPEKMVYVSCNTSTLARDLVTLTKVYHVHYIQSVDMFPHTARTEAVVKLQRKE

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......--130..----------.....140..-.-......150.......160-------........170.......180.......190....-....200..------.....210..-.....-220.-........230......-..240.......250----.--......260-.--.---.-..-...270--...-----.....-.--280.......-290.-....-..300-....--...310.......320...--.---.-..330.......340.......350-.--.--......360....-----.-..------------370-----.........380.----------......------------390---------.-...-.-.---.---.--------------.400...----....410------.....-..420--.---.-......------430.-------------.......440-........450-------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNVVLKQRIPLKIKRMGINGEGIGFYKKTLIFVPGALKGEEVFCQISSVRRNFAEAKLLKINKKSKNRVDPACSIYKECGGCQIMHLQYDKQLEFKTDVIRQALMKFKPEGYENYEIRKTIGMSEPEHY--RAKLQ----------FQVRSF--GG-N-VRAGLYAQGTHRLIDIKD--------CLVQDSLTQEMINRVAELLGKYKLPIYNE-RKIAG-VRTVMIRRA------QASGEVQLIF-ITSKR-L--D-FDDVVIELV-REFPELK-TVAVNINASKTSDIY----G--QITEVIWG--Q--E---S-IN-EEVL----DYG-----FSLSP-R--AFYQLNPKQT-QILY-SEAV-KALDV-KEDD--DLIDAYCGVGTIGLAFAGK--V---K-SVRGMDIIPEAIQDAKENALHMG-F-T--N--THYEAGKAEDVIP-----R-WY------------S-------EGFRANALIVDPP----------RTGLDD------------K-----------L-LNT-I-L---K---M--------------PPEKMVY----VSCNTST------LARDL-VTLT---K---V-YHVHYI------QS-V-------------DMFPHTART--EAVVKLQRKE--------------------------
2 PsiBlast_PDB 93.6526% -74 - C1 -1UWV RLMD_ECOLI A:[15-431] ------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKS----AALARLM-----KHDVSEVIA-DVPWGYRRRARLS----------LNYLPK--TQ-Q-LQMGFRKAGSSDIVDVKQ--------CPILAPQLEALLPKVRACLGS----LQAM-RHLGH-VELVQA----------TSGTLMILR-HTAPL-S--S-ADREKLE---------------RFSHSEGLDLYLAPDS--EILETVSG--E--M---P-WY-DSN-----GLR-----LTFSP-R--DFIQVNAGVN-QKMV-ARAL-EWLDV-QPED--RVLDLFCGMGNFTLPLATQ--A---A-SVVGVEGVPALVEKGQQNARLNG-L-Q--NV-TFYHENLEEDVTK-----QPWA------------K-------NGF--DKVLLDPA----------RAGAAG------------------------V-MQQ-I-I---K---L--------------EPIRIVY----VSCNPAT------LARDS-EALL---K---AGYTIARL------AM-L-------------DMFPHTGHL--ESMVLFSRV---------------------------
1 PsiBlast_PDB 92.8327% -75 - C1 -2BH2 RLMD_ECOLI A:[15-431] ------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALAR-LMK--------HDVSEVIA-DVPWGYRRRARLS----------LNYLPK--TQ-Q-LQMGFRKAGSSDIVDVKQ--------CPILAPQLEALLPKVRACLGS----LQAM-RHLGH-VELV-----------QATSGTLMIL-RHTAP-L--S-SAD-------REKLE-------RFSHSEGLDLYL---A--PDSEIL-------E---T-VS-GEMP----WYDSNGLRLTFSP-R--DFIQVNAGVN-QKMV-ARAL-EWLDV-QPED--RVLDLFCGMGNFTLPLATQ--A---A-SVVGVEGVPALVEKGQQNARLNG-L-Q--NV-TFYHENLEEDVTK-----QPWA------------K-------NGF--DKVLLDPA----------RAGAAG------------------------V-MQQ-I-I---K---L--------------EPIRIVY----VSCNPAT------LARDS-EALL---K---AGYTIARL------AM-L-------------DMFPHTGHL--ESMVLFSRV---------------------------
37 HHSearch 78.1024% -10 - C- -1UWV RLMD_ECOLI A:[15-432] ------QIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHD---------VSEV-IADVPWGY--RRRAR----------LSLNYLPKTQ-Q-LQMGFRKAGSSDIVDVKQ--------CPILAPQLEALLPKVRACLGSLQA----M-RHLG----HVELVQA-------TSGTLMILR-HTAPLSS--A-DREKLERF-----SHSE-GLDLYLAPDS------------EILETVSG--E--M---P-WY--DSN----GLR-----LTFSP-R--DFIQVNAGVN-QKMV-ARAL-EWLDV-QPED--RVLDLFCGMGNFTLPLATQ--A---A-SVVGVEGVPALVEKGQQNARLNG-L-Q--N--VTFYHENLEEDVT-----K-QP------------W-------AKNGFDKVLLDPA----------RAGAAG------------------------V-MQQ-I-I---K---L--------------EPIRIVY----VSCNPAT------LARDS-EALLK--A---G-YTIARL------AM-L-------------DMFPHTGHL--ESMVLFSRV---------------------------
38 HHSearch 75.4720% -70 - C1 -3BT7 TRMA_ECOLI A:[3-369] -----------------------------------------------------------------------------HMTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDL------VPEVFRS-PVSHY--RMRAE----------FRIWHD--GDDL-YHIIFD-QQTKSRIRVDS--------FPAASELINQLMTAMIAGVRNNPVL-------RHK-LFQIDYLTT-------LSNQAVVSL-LYHKKLDD-E-WRQEAEALR-DALRAQNLNVHLIGR------------A--TKTKIELD--Q--D---Y-ID-ERLPVAGKEMI-----YRQVE-N--SFTQPNAAMN-IQML-EWAL-DVTKG--SKG--DLLELYCGNGNFSLALARN--F---D-RVLATEIAKPSVAAAQYNIAANH-I-D--N--VQIIRMAAEEFTQ-----A-MNGVREFNRLQGIDL-------KSYQCETIFVDPP----------RSGLDS------------E-----------T-EKM-V---------Q--------------AYPRILY----ISCNPET------LCKNL-ETLS---Q---T-HKVERL------AL-F-------------DQFPYTHHM--QCGVLLTAK---------------------------
27 Fugue 73.7319% -58 - C1 -3BT7 TRMA_ECOLI A:[1-369] -----GSHMTPE----------------------------------------------------------------------HLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFR-------SPVSHY--RMRAE----------FRIWHD--GD-D-LYHIIFDQQTKSRIRVDS--------FPAASELINQLMTAMIAGVRN-------N-PVLRH-KLFQIDYLT------TLSNQAVVSL-LYHKK-LDDE-WRQEAEALR-DALRAQN-LNVHLIGRATKTKIE----L--DQD---YI--D--E---R-LP-VAGK----EMI-----YRQVE-N--SFTQPNAAMN-IQML-EWAL-DVTK--GSKG--DLLELYCGNGNFSLALARN--F---D-RVLATEIAKPSVAAAQYNIAANH-I-D--N--VQIIRMAAEEFTQ-----A-MNGVREFNRLQGIDL-------KSYQCETIFVDPP----------RSGLDS------------E-----------T-EKM-V---------Q--------------AYPRILY----ISCNPET------LCKNL-ETLS---Q---T-HKVERL------AL-F-------------DQFPYTHHM--QCGVLLTAK---------------------------
3 PsiBlast_PDB 62.3328% -71 - C1 -3BT7 TRMA_ECOLI A:[206-369] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDV-TKGSKGDLLELYCGNGNFSLALARN--F---D-RVLATEIAKPSVAAAQYNIAANH-I-D--N--VQIIRMAAEEFTQAMNGVR-EF------------NRLQGIDLKSYQCETIFVDPP----------RSGLDS------------E-----------T-EKM-V-Q---A---Y--------------P--RILY----ISCNPET------LCKNL-ETLS---Q---T-HKVERL------AL-F-------------DQFPYTHHM--QCGVLLTAK---------------------------
30 Fugue 55.1013% -59 - C1 -2CWW ? A:[1-382] MRIQVNAKGAARLLS------------------------RHLWVFRRDVVSGPETPGLYPVYWG------------------------------------------------------------------------------------------RR-F-LALALYNPHTDLAVRAYR--------FAPAEDPVAALLENLAQALARREAVLRQD-PE--G-GYRLVHAEGDLLPGLVVDYYAGHAV-VQATA-H--A-WEGLLPQVA-EALRPHV-QSVLAKNDARTRELE----GLPLYVRPLLG--EVPE---R-VQ-VQEG----RVR-----YLVDL-G--AYLDQRENRL-YMER-FRGE-RALDV------------FSYAGGFALHLALG--F---R-EVVAVDSSAEALRRAEENARLNG-L-G--N--VRVLEANAFDLLR-----R-LE------------K-------EGERFDLVVLDPP----------AFAKGK------------K-----------D-VER-A-Y---R------------------AYKEVNL----RAIKLLK------EGGIL-ATAS---C---S-HHMTEP------LF-Y-------------AMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL-
41 HHSearch 53.0816% -65 * C1 *2YX1 TRM5B_METJA A:[149-335] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEHLAG--E--NR--T-LTIHKEN----GYR-----LWVDI-A--KVYFSPRLGG-ER---ARIM-KKVS---LND--VVVDMFAGVGPFSIACKN---A---K-KIYAIDINPHAIELLKKNIKLNK-L-EH-K--IIPILSDVREVD--------------------------------VKGNRVIMNLP----------KFAH--------------K-----------F-IDKAL-D---I---V--------------EEGGVIH----YYTIGKD------FDKAI-KLFE---KKC-D-CEVLEK------RIVK-------------SYAPREYIL--ALDFKINKK---------------------------
39 HHSearch 52.4411% -58 - C1 -3VSE ? A:[14-335] ------------------------------------------------------------------------------------------------------------------------YFNGYPLIE--EEDIYSQDHLKEGDIFQIVTD--KS-QYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDN---------YDGHL-LI-QWYSKGIY-KFKYAILEAVR-KVFD-YK-SIYEKVRFKD----S----E--YSGGFVEG--D--APEFP-IV-IEEN----FTF-----YNVDL-E--DGLMTGIFLD-QKEV-RKKLRGQYA---KER--HVLNLFSYTGAFSVIAASE--A---S-STTSVDLANRSRSLTEENFGLNA-I-D--PKSQYIYVMDTFDFYK-----Y-AA------------R-------HGHSYDTIVIDPP----------SFARNK------------KRTFSVQKDYDKL-INGAL-N---I---L--------------SSEGTLL----LCTNASV------YPLKQ-FKNT---I---K-KTLEES------GV-D-------------YELTEVMGL--PKDFKTHPHY--------------------------
52 HHSearch 51.4821% -61 - C1 -2PWY TRMI_THET2 A:[86-255] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAMV-TLLDL-APGM--RVLEAGTGSGGLTLFLARA--VGEKG-LVESYEARPHHLAQAERNVRAFWQV-E--N--VRFHLGKLEEAEL-----E------------------------EAAYDGVALDLM----------EP---W------------K-----------V-LEK-AAL---A---L--------------KPDRFLV----AYLPNIT------QVLELVRAAE---AH--P-FRLERV------LE-VGWREWEVRLPVAHPRFQQVGHT--AFLVALRRWK--------------------------
45 HHSearch 50.6212% -67 - C1 -3V97 RLMKL_ECOLI A:[502-702] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LE-VTEY----NAH-----LWVNL-T--DYLDTGLFLD-HRIARRMLG-QMS----KGK--DFLNLFSYTGSATVHAGLG--GA--R-STTTVDMSRTYLEWAERNLRLNG-L-TGRA--HRLIQADCLAWLR-----E-A----------------------NEQFDLIFIDPP----------TFS---AFDVQRDHL---A-----------L-MKD-LKR---L---L--------------RAGGTIM----FSNNKRG------FRMDL-DGLA---KL--G-LKAQEITQKT--LS-Q-------------D-FARNRQI--HNCWLITAA---------------------------
48 HHSearch 49.4616% -58 - C1 -3A27 TYW2_METJA A:[74-268] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKILYG--K--E---TETI-HKEY----GCL-----FKLDV-AKIMWSQGNIEER-KRMA-F-----ISN---ENE--VVVDMFAGIGYFTIPLAKYSKP---K-LVYAIEKNPTAYHYLCENIKLNK-L-N--N--VIPILADNRDVEL------------------------------KDVADRVIMGYV----------H-KT-H------------K-----------F-LDK-TFE---F---L--------------KDRGVIH----YHETVAEKIMYERPIERL-KFYAEK-N---G-YKLIDYEVR---KI-K-------------KYAPGVWHV--VVDAKFERI---------------------------
55 HHSearch 49.3219% -39 - C1 -2IGT ? A:[113-273] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-LSLL----GVE-----FLGRF-T--AFRHVGVFPEQIVHW-EWLK-NAVETADRPL--KVLNLFGYTGVASLVAAAA--G---A-EVTHVDASKKAIGWAKENQVLAG-L-EQAP--IRWICEDAMKFIQ-----R-EE------------R-------RGSTYDIILTDPP----------KFGRGTHGEVWQLFDHLPL-----------M-LDI-CRE---I---L--------------SPKALGL----VLTAYSI------RASFY-SMHE---L---M-RETMRG------AG-G-------------VVASGELVI--REAGLDGKTP--------------------------
58 HHSearch 48.0017% -52 - C1 -2FPO RSMD_ECOLI A:[20-167] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QWR----GRK-----LPVPDS--------TDRVR-ETLF-NWLA-PV----IVDA--QCLDCFAGSGALGLEALSR--YA--A-GATLIEMDRAVSQQLIKNLATLK-A-G--N--ARVVNSNAMSFLA-----Q-K----------------------GTPHNIVFVDPPF---------RRGLLE------------E-----------T-INL-L-E---DNGWL--------------ADEALIY----VESEVEN------GLPTV-PANW---S---L-HREKVA------GQ-V-------------AYRLYQREA--Q-----------------------------------
50 HHSearch 46.8017% -57 - C1 -1JG1 PIMT_PYRFU A:[76-224] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-PHMV-AIML-EIANL-KPGM--NILEVGTGSGWNAALISEI--VK--T-DVYTIERIPELVEFAKRNLERAG-V-K--N--VHVILGDGSKGFP-----P------------------------KAPYDVIIVTAG----------APKIPE------------P---------------L-I-E---Q---L--------------KIGGKLI----IPVGSYH------LWQEL-LEVR---KTKDG-IKIKNH------GG-V-------------AFVPLIGEY--GWK---------------------------------
29 Fugue 46.5221% -24 - C1 -3GDH TGS1_HUMAN B:[25-235] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIAA----V--PELAKYWA--Q--R---Y-RL-FSRF----DDG-----IKLDR-E--GWFSVTPEKI-AEHI-AGRV-S-----QSCD--VVVDAFCGVGGNTIQFALT--G---M-RVIAIDIDPVKIALARNNAEVYG-I-A--DK-IEFICGDFLLLAS-----F-------------------------LKADVVFLSPP----------WGGPDY------------A-----------T-AE---------------------------TFDIRTM----MSPDGFE------IFRLS-KKIT---N-----------------NI-V-------------YFLPRNADI--DQVASLAGPGGQVEIEQNFLNNKLKTITAYFGDLIR
56 HHSearch 45.9419% -52 - C1 -1NV8 PRMC_THEMA A:[90-204] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FM----GLS-----FLVEE-G--VFV--PRPET-EELV-ELAL-ELIRK-YGIK--TVADIGTGSGAIGVSVAKF--SD--A-IVFATDVSSKAVEIARKNAERHG-VSD--R--FFVRKGEFLEPFK-----E-K----------------------FASIEMILSNPP----------YVKSSA------------H-----------L-PKD-V-L---F---E--------------PPEALFG----GEDGLDF------YREFF-GRYD---T---S-GKIVLM------EI-G-------------EDQVEELKK--IVSDTVFLKD--------------------------
33 Fugue 45.6614% -55 - C1 -1NV9 PRMC_THEMA A:[15-284] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIWSL------IRDCSGKLEGVTETSV-L--E-VLLIVSRVLGIRKEDLF-LKDLGVSPTEEKRIL----E--LVEKRASGYPL--H---Y-IL-GEKE----FMG-----LSFLV-E--EGVFVPRPET-EELV-ELAL-ELIRK-YGIK--TVADIGTGSGAIGVSVAKF--S---DAIVFATDVSSKAVEIARKNAERHG-V-S--DR-FFVRKG---EFLE-----P-FK------------E-------KFASIEMILSNPPYVKSSALFEPPEALFGGEDGL-------D-----------F-YRE-F-F---G---RYDTSGKIVLMEIGEDQVEELK----KIVSDTV------FLKDS-AGKY---R---F-LLLNRR------SS--------------------------------------------------------------
46 HHSearch 44.4815% -43 - C1 -3P9N ? A:[10-170] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG----GRR-----IAVPP-R--G---TTDRVR-ESLF-NIVT-ARRD--LTGL--AVLDLYAGSGALGLEALSRG-A---A-SVLFVESDQRSAAVIARNIEALG-L-S--G--ATLRRGAVAAVVA-----A-G---------------------TTSPVDLVLADPP----------YNVDSA------------DVDA--------I-LAA-L-GTNGW---T--------------REGTVAVVERATTCAPLT------WPEGW-RRWP---Q---R-VYGDTR------LE-L-------------AERL-------------------------------------------
54 HHSearch 44.4116% -42 - C1 -1WY7 ? A:[25-195] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--EQYRTPGNAA-SELL-WLAY-SL-GD-IEGK--VVADLGAGTGVLSYGALLL--GA--K-EVICVEVDKEAVDVLIENLGEFK---G--K--FKVFIGDVSEF--------------------------------NSRVDIVIMNPP----------FGSQRK------------H-----------ADRPF-LLK---A---F--------------EISDVVY----SIHLAKP------EVRRF-IEKFSWEH---G-FVVTHRLTTKIEIP-------------------HRKKL--ERITVDIYRF--------------------------