@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0497: (2015-12-01 )
MKKSFIHQQQEISFVKNTFTQYLIDKLEIVEVQGPILSQVGDGMQDNLSGIEHPVSVKVLNIPEAEFEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPDEDSLDPTHSVYVDQWDWEKVIPDGRRNLDYLKETVEKIYKAIRLTELAVEARFDIESILPKRITFIHTEELVEKYPDLSPKERENAIAKEYGAVFLIGIGGELADGKPHDGRAPDYDDWTTPSENGFKGLNGDILVWNEQLGTAFELSSMGIRVDEDALKRQVVLTGDEGRLEFEWHKTLLRGFFPLTIGGGIGQSRLAMFLLRKKHIGEVQSSVWPKEVRDTFENIL

Atome Classification :

(20 SA) ----.........10........20..-......30.....---------------...40....-....50-.-.-----.....----.60..----....-------..70----........80....---.....90........100...--....110.......120..-.-...----.130..------.....140....-.-.------.---150.---.-------..---.---..160..------------------...----...170----.......180-------.--------------.---------------.-------------------------------------------------------------------------------.-------.-----------------------.---.-----.-----.-------190-----------.-.----.------......200-----....------------..---.210.......220--------......-...--230.......240.....-..250.-....---..260......---.---270........280....-...290......----.300.......310.......320.......330
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MKKSFIHQQQEISFVKNTFTQYL-IDKLEIVEVQGPI---------------LSQVGDGMQ-DNLSGI-E-H-----PVSVK----VLNIP----EAEF-------EVVH----SLAKWKRHT-LARF---GFNEGEGLFVHMKALRPDEDS--LDPTHSVYVDQWDWEKVIP-D-GRR----NLDYLK------ETVEKIYKAIRL-T-E------L---AVEA---R-------FD---I---ESI-LPK------------------RIT----FIHTEE----LVEKYPDL---------S--------------P---------------K-------------------------------------------------------------------------------E-------R-----------------------E---N-----A-----I-------A-------------K-E----Y------GAVFLIGIG-----GELA------------DG---KPHDGRAPDYDD----------WTTPSE-NGF--KGLNGDILVWNEQLGTAF-ELSSMG-IRVD---EDALKRQVVLT---G---DE-GRLEFEWHKTLLRGF-FPLTIGGGIGQS----RLAMFLLRKKHIGEVQSSVWPKEVRDTFENIL
46 Fugue 97.5562% -67 - C4 -12AS ASNA_ECOLI A:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQH---DFSAGEGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-----GKLS------------DG---HRHDVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
2 PsiBlast_PDB 97.5562% -67 - C4 -12AS ASNA_ECOLI A:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQH---DFSAGEGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-----GKLS------------DG---HRHDVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
18 PsiBlast_CBE 96.6662% -64 - C4 -12AS ASNA_ECOLI B:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQH---DFSAGEGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-----GKLS------------DG---HRHDVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
1 PsiBlast_PDB 96.5262% -62 - C4 -11AS ASNA_ECOLI A:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQH---DFSAGEGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-----GKLS------------DG---HRHDVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
19 PsiBlast_CBE 96.3562% -63 - C4 -11AS ASNA_ECOLI B:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQH---DFSAGEGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-----GKLS------------DG---HRHDVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
25 HHSearch 95.5662% -64 - C4 -12AS ASNA_ECOLI A:[4-330] -------AYIAKQRQISFVKSHFSRQL-EERLGLIEVQAPI---------------LSRVGDGTQ-DNLSGA-E-K-----AVQVK----VKALP----DAQF-------EVVH----SLAKWKRQT-LGQHDFSAG---EGLYTHMKALRPDEDR--LSPLHSVYVDQWDWERVMG-D-GER----QFSTLK------STVEAIWAGIKA-T-E------A---AVSE---E-------FG---L---APF-LPD------------------QIH----FVHSQE----LLSRYPDL---------D--------------A---------------K-------------------------------------------------------------------------------G-------R-----------------------E---R-----A-----I-------A-------------K-D----L------GAVFLVGIG-------GK------------LSDGHRH-DVRAPDYDD----------WSTPSE-LGH--AGLNGDILVWNPVLEDAF-ELSSMG-IRVD---ADTLKHQLALT---G---DE-DRLELEWHQALLRGE-MPQTIGGGIGQS----RLTMLLLQLPHIGQVQAGVWPAAVRESVPSLL
3 PsiBlast_PDB 95.4756% -86 - C4 -4LNS - ? A:[8-345] -------SYVLLQEQILTVKRSFSEAL-EKELNLVEVRAPI---------------LFRVGDGTQ-D--------------AVQVP----VKAIP----NASF-------EVVH----SLAKWKRRT-LANY---KFAPGHGLYTHMTALRVD-DV--LDNIHSVVVDQWDWEMVMK-D-DQR----NLAFLK------EVVCKVYAAIRK-T-E------L---AVCE---K-------YK---Q---KPI-LPE------------------TIQ----FVHAEH----LLLAYPNL---------T--------------A---------------K-------------------------------------------------------------------------------E-------R-----------------------E---R-----E-----I-------A-------------R-E----Y------GAVFLIGIG-----AVLS------------S--------------------------------LSSL--KGLNGDILLYNPTLDDSL-EVSSMG-IRVN---AEALRHQISLT---G---DD-SLLKSEWHQQLLNGE-FPQTVGGGIGQS----RMVMFMLRKKHIGEVQCSVWPEEIRKKHNL--
32 HHSearch 57.2717% -43 - C4 -1EOV - SYDC_YEAST A:[247-553] -------IFRIQAGVCELFREYLA------TKKFTEVHTPK---------------LLGAPSEGG-SSVFEV-------------T----YFK-------GKA-------YLAQ----SPQFNKQQL-IVA----DF---ERVYEIGPVFRA-ENS--NTHRHMTEFTGLDMEMAFE-EHYHE----VLDTLS------ELFVFIFSELPKRF-A------H---EIEL---VRKQ----YP---VEEFKLP-KDG------------------KMV----RLTYKE----GIEMLRAA---------GKEIGDFEDL-----S---------------T-------------------------------------------------------------------------------E-------N-----------------------E---K-----F-----L-------G-------------K-LVRDKYDT----DFYILDKFP-------LE------------IR---PFYTMPDPANPK----------YS------------NSYDFFMRGEEILSGAQRIHDHA-LL-----QERMKAHG--L---S---PE-DPGLKDYCDGF-SYG-CPPHAGGGIGLE----RVVMFYLDLKNIRRAS--LFPRDPKRLRP---
29 HHSearch 54.6715% -45 - C4 -3M4P ? A:[154-451] ------QVLQLRSEIQWYFRKYYH------DNHFTEIQPPT---------------IVK-------STLFKL-------------Q----YFN-------EPA-------YLTQ----SSQLYLESV-IA-----SL---GKSFCMLSSYRA-EQS--RTVRHLAEYLHLEAELPFI-S-FED----LLNHLE------DLVCTVIDNVMA-V-HG-----D---KIRK---M-------NP---H---LKL-PTR------------------PFK----RMTYAD----AIKYCNDH---------GILNKDKPFEYGEDIS---------------E-------------------------------------------------------------------------------K-------P-----------------------E---R-----Q-----M-------T-------------D-E----IG-----CPIFMIHFP-------SK------------MK---AFYMSKVPGHPD----------LT------------ESVDLLM------PGVGEIVGGS-MR-----IWNYDELMGAYKANG---LN-PDPYYWYTQQR-KYG-SCPHGGYGLGVE----RLVMWLLGEDHIRKVC--LYPRYLERCEP---
33 HHSearch 54.6217% -57 - C4 -3I7F - ? A:[239-539] -------IFRIQSACCGLFREFLT------SQKFVEIHTPK---------------LI--------------------------------------------A-------YLAQ----SPQLYKQMA-IMG----DF---RKVFEVGPVFRA-ENS--NTRRHLTEFEGLDIEMEIVEN-YHE----CIDVME------KLFTFIFDEIPK-RFP------D---ELKVIRKQ-------YP---F---EDL-IYR------------------PFL----RLTYKE----AIEMLRAS---------GETIGDYDDF-----T---------------T-------------------------------------------------------------------------------P-------Q-----------------------E---V-----K-----L-------G-------------E-LIKAKYNT----DFYILDKFP-------AA------------IR---PFYTMPDIDDPN----------YS------------NSYDVFVR------GQ-EITSGA-QR-----IHDPEFLMKRCIEKG---VD-PATLKDYIESF-RFG-SWPHAGCGIGLE----RITMLYLGIPNIRKVT--LFPRDPIRLNP---
37 HHSearch 54.5822% -42 - C4 -1NNH - ? A:[14-287] -------TLDIQTKILEYMTDFFV------KEGFKWLLPVI---------------ISPITDPLW-PDPAGEGM-E-----PAEVE----IYG-------VKM-------RLTH----SMILHKQLA-IAM----GL---KKIFVLSPNIRL-ESRQKDDGRHAYEFTQLDFEVERA-K-MED----IMRLIE------RLVYGLFRKAEE-W-T-----------GR---------------------EFP-KTK------------------RFE----VFEYSE----VLEEFGSD---------E--------------------------------------------------------------------------------------------------------------------------------------------------------K-----A-------S-------------QEM----E------EPFWIINIP-------R------------------EFYDREV---DG----------FW------------RNYDLI-----LPYGYGEVASGG-ER-----EWEYEKIVAKIRKAG---LN-EDSFRPYLEIA-KAGKLKPSAGAGIGVE----RLVRFIVGAKHIAEVQP--FPRIPGIPAVI--
38 HHSearch 54.4113% -31 - C4 -3A5Y EPMA_ECOLI A:[35-344] -------NLLKRAAIMAEIRRFFA------DRGVLEVETPC---------------MSQATVTDIHLVPFET-R-FVGPGHSQGMN----LW-LM----T------------------SPEYHMKRL-LVA----GC---GPVFQLCRSFRN-E-E--MGRYHNPEFTMLEWYRPHY-D-MYR----LMNEVD------DLLQQVLDCPAA-E-S------L---SYQQ---A-------FL---R---YLEIDPL------------------SAD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLLQLLFTFG-----V-------E-------------P-N----IGKE---KPTFVYHFP-------AS------------QA---SLAQIS-TEDHR----------VA------------ERFEVYYKGIELANGFHELTDAR-EQ-----QQRFEQDNRKR---AARGLPQHPIDQNLIEAL-KVG-MPDCSGVALGVD----RLVMLALGAETLAEVI--AFSVDRA-------
36 HHSearch 53.5615% -36 - C4 -1L0W - SYD_THETH A:[143-556] -------NLRLRHRVIKAIWDFLD------REGFVQVETPF---------------LTKSTPEGA-R-DFLV-------------P----YRHEP----GLFY-------ALPQ----SPQLFKQML-MVA----GL---DRYFQIARCFRD-E-D--LRADRQPDFTQLDLEMSFV-E-VED----VLELNE------RLMAHVFREALG-V-E--------------------------------------LPL------------------PFP----RLSYEE----AMERYGSD---------K--------------P---------------DLRFGLELKEVGPLFRQSGFRVFQEAESVKALALPKALSRKEVAELEEVAKRHKAQGLAWARVEEGGFSGGVAKFLEPVRE-------ALLQATEARPGDTLLFVAGPRKVAA---T-----A-----L-------GAVRLRAADLLGLKREG----F------RFLWVVDFP-------LLEWDEEEEAWTYMHH---PF-TSPHPEDLP----------LLEKDP-GRV--RALAYDLVLNGVEVGGGSIRIHDPR-LQ-----ARVFRLLGIGE---E---EQ-REKFGFFLEAL-EYG-APPHGGIAWGLD----RLLALMTGSPSIREVIA--FPKNKEGKDPLTG
27 HHSearch 52.6515% -39 - C4 -1E1O SYK2_ECOLI A:[181-500] ------QTFVVRSKILAAIRQFMV------ARGFMEVETPM---------------MQVIPGGAS-ARPFIT-H----------HN----ALD-------LDM-------YLRI----APELYLKRL-VVG----GF---ERVFEINRNFRN-E-G--ISV-HNPEFTMMELYMAYA-D-YHD----LIELTE------SLFRTLAQEVLG-T-T----------KVTY---G--------E---H---VFD-FGK------------------PFE----KLTMRE----AIKKYRPE---------TDMADLD--------NF--------------DAAKALAESIGITV------------------------------------------------------------------EKSWGLGRI-----------------------V---T-----EIFDEVA-------E-------------A-HL---I------QPTFITEYP-------AE------------VS---PLARR-NDVNPE----------IT------------DRFEFFIGGREIGNGFSELNDAE-DQ-----AERFQEQVNAKAA-GDD-EA-MFYDEDYVTAL-EYG-LPPTAGLGIGID----RMIMLFTNSHTIRDVIL--FPAMRP-------
34 HHSearch 52.3019% -42 - C4 -3NEM SYD_THEKO A:[136-434] -------IFKIRSSVFKAVRDFFH------ENGFIEIHTPK---------------IIATATEGG-TELFP-------------MK----YFE-------EDA-------FLAQ----SPQLYKQIM-MAS----GL---DRVYEIAPIFRA-EEH--NTTRHLNEAWSIDSEMAFIED-EEE----VMSFLE------RLVAHAINYVRE-HNA------K---ELDI---L-------NF---E---LEE-PKL------------------PFP----RVSYDK----ALEILGDL---------GKEIPWGEDI-----D---------------T-------------------------------------------------------------------------------E-------G-----------------------E---R-----L-----L-------G-------------K-Y----MMENENAPLYFLYQYP-------SE------------AK---PFYIMKYDNKPE----------IC------------RAFDLEYRG------V-EISSGG-QREHR--HDILVEQIKEK---G---LN-PESFEFYLKAF-RYG-MPPHGGFGLGAE----RLIKQMLDLPNIREVIL--FPRDRRRLTP---
26 HHSearch 52.3016% -36 - C4 -1WYD SYDND_SULTO A:[133-426] -------VIKIQSLALKAFRETLY------KEGFIEIFTPK---------------IIASATEGG-AQLFP-------------VI----YFG-------KEA-------FLAQ----SPQLYKELM-AG-----VV---ERVFEVAPAWRA-EES--DTPFHLAEFISMDVEMAFA-D-YND----VMQLLE------KILHNIVKTIKE-E-GK-----E---ELKI---L-------NY---E---PPE-VKI------------------PIK----RLKYTE----AIEILRSKGYNIKFGDDI--------------G---------------T-------------------------------------------------------------------------------P-------E-----------------------L---R-----I-----L-------N-------------E-E----LKE----DLYFIVDWP-------SD------------AR---PFYTKSKSE-PE----------LS------------ESFDLIYK------FL-EIVSGS-TRNHK--REVLEEALKKK---G---LK-PESFEFFLKWF-DYG-MPPHAGFGMGLA----RLMVMLTGIQSVKEIV--PFPRDKKRLTP---
35 HHSearch 51.0713% -40 - C4 -2XGT ? A:[130-430] ------ALLRLRAAATRAMREHFY------NAGYVEVAPPT---------------LVQTQVEGG-STLFN-------------LD----YFG-------EQS-------FLTQ----SSQLYLETC-IP-----TL---GDVFCIAQSYRA-EKS--RTRRHLAEYAHVEAECPFI-T-LDD----LMEKIE------ELVCDTVDRLLA-D-E------EAKKLLEH---I-------NP---K---FQP-PER------------------PFL----RMEYKD----AIKWLQEH---------N--------------VENEFGNTFTYGEDIAE-------------------------------------------------------------------------------A-------A-----------------------E---R-----F-----M-------T-------------D-T----IN-----KPILLNRFP-------SE------------IK---AFYMQRDAQDNT----------LT------------ESVDLLMP------GVGEIVGGS-MR-----IWKFDELSKAFKNVE---ID-PKPYYWYLDQR-LYG-TCPHGGYGLGLE----RFICWLTNTNHIRDVC--LYPRFVGRCVP---
28 HHSearch 49.9617% -32 - C4 -3A74 SYK_GEOSE A:[172-491] ------KTFITRSLIIQSMRRYLD------SHGYLEVETPM---------------MHAVAGGAA-ARPFIT-HHN-----ALDMT----LY-MR------------------I----AIELHLKRLIVG-----GL---EKVYEIGRVFRN-E-G--ISTRHNPEFTMLELYEAYA-D-FRD----IMKLTE------NLIAHIATEVLG-T-T------K----IQY---G-------EH-------LVD-LTPEWRRLHMVDAIKEYVGVDFWR----QMSDEE----ARELAKEH---------G--------------VEVAPHMTF-------G-------------------------------------------------------------------------------HIVNEF--F-----------------------E---Q-----K-----V-------E-------------D-K----LI-----QPTFIYGHP-------VE------------IS---PLA-KKNPDDPR----------FT------------DRFELFIVGREHANAFTELNDPI-DQ-----RQRFEEQLKEREQ-GND-EA-HEMDEDFLEAL-EYG-MPPTGGLGIGVD----RLVMLLTNSPSIRDVL--LFPQMRH-------
30 HHSearch 49.7816% -37 * C4 *1X54 SYN_PYRHO A:[134-430] -------IMKVKETLIMAAREWLL------KDGWHEVFPPI---------------LVTGAVEGG-ATLFKL-------------K----YFD-------KYA-------YLSQ----SAQLYLEAA-IF-----GL---EKVWSLTPSFRA-EKS--RTRRHLTEFWHLELEAAWM-D-LWD----IMKVEE------ELVSYMVQRTLE-L-RK-----K---EIEM---F-------RDDLTT---LKN-TEP------------------PFP----RISYDE----AIDILQSK---------GVNVEWGDDL-----G---------------A-------------------------------------------------------------------------------D-------E-----------------------E---R-----V-----L-------T-------------E-E----FD-----RPFFVYGYP-------KH------------IK---AFYMKEDPNDPR----------KV------------LASDML-----APEGYGEIIGGS-QR-----EDDYDKLLNRI---LEEGMD-PKDYEWYLDLR-RYG-SVPHSGFGLGVE----RLVAWVLKLDHIRWAA--LFPRTPARLYP---
47 Fugue 44.7923% -42 * C7 *4C2E - CTPB_BACSU A:[2-436] ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLD-SSFEGI-G-A-----EVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAG-KDLN-HAVL---KIRGKKGSSVSMKIQRPGTKK---QLSFRIKRAEIPLETVFA-S-EKKVQGHSVGYIAISTFSEHTTEDFAKALRE-L-EKKEIEGL---VIDV---RGNPGGYIQS---V---EEI-LKH------------------FVTKDQPYIQIAERNGDKKRYFSTL---------T--------------H---------------K-------------------------------------------------------------------------------K-------A-----------------------YPV-N-----V-----ITDKGSAAA-------------S-E----I------LAGALKEAGHYDVVGDTS------------FG---KGTVQQAVPMGDGSNIKLTLYKWLTPNG-NWIHKKGIEPTIAIKQPDYFSAG-PLQLKEPLKVDMNNEDVKHAQVLLK---GLSFDP-GREDGYFSKDMKKAV-MAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF