@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0564: (2015-12-01 )
MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWRIED

Atome Classification :

(20 SA) --------------------------.....--------....10------....-.-------------------..-.20..------......30.......-----------.40..-......50----------.....---...60-.........--70.......---.80---...----.-.-.---..90.--......-----.100----------------.......110..------.-....120........130------......---.------.140....-...150.......160.----------......170-------.......-------..-------------------180......-----.190....----------...200-------.........210--.....--.-..220.......230.--------------------.---------------------.------.-----.-----------------.---.-.240.......250.....-...260..--.----....-.270----.......--280-.......----.--290.---......300.......310-----...-----.....320.......330.....------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------MEEEI--------ALLENQ------MTEP-D-------------------FW-NDNIA------AQKTSQELNELKGKY-----------DTFHN-MQELSDET----------ELLLE---MLDE--DDSLKEELE--ENLMQLDKI---MGA---YEM----T-L-L---LSEPY--DHNNAI-----LEIH----------------PGSGGTEAQDWG------D-LLLRM-YTRFGNANGFK-------VEVLDY---Q------AGDEAGIK-SVTLSFEGPNAYGLLKS----------EMGVHRL---------VRISPFD-------SA-------------------KRRHTSFAS-----VEVMPELD----------DTIE---------VEVRDDDIKMD---TFRSG--G-AGGQNVNKVSTGV-RL--------------------T---------------------H------I-----P-----------------T---G-IVVSSTVDRTQY-GNRDRA-MKML-QAK--L----YQLE-QEKK----AQEVDAL--KG--DKKEITW----G--SQIR---SYVFTPYTMVKDHRTNFE------LAQ-----VDKVMDGEINGFIDAYLKWRIED------
4 PsiBlast_PDB 88.7538% -59 - C4 -1RQ0 - RF1_THEMA A:[30-327] ------------------------------------------------------------------------------------------------------AKI-----------EEIEN-ITNRIKET----------QEFIE---LLRE--EGENELEIE--KYEKELDQL---------YQE----L-L-F---LLSPE--ASDKAI-----VEIR----------------PGTGGEEAALFA------R-DLFRM-YTRYAERKGWN-------LEVAEI---H------ETDLGGIR-EVVFFVKGKNAYGILKY----------ESGVHRV---------QRVPVTE-------SG-------------------GRIHTSTAT-----VAVLPEIE----------EK-D---------IEIRPEDLKIE---TFRAS--G-----YVNKTESAV-RI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY-QNKQTA-LRIL-RAR--L----YQLQ-KEQK----EREISQ-------------------RSEKIR---TYNF-PQNRVTDHRINYT------SYR-----LQEILDGDLDEIISKLIEHDIEN------
19 HHSearch 88.7036% -57 - C4 -1RQ0 - RF1_THEMA A:[1-326] --------------------------MKEKK--------KEIEKL------LARP-D-------------------LT-PE--Q------MKNYGMEYAKIEEIE-----------NITNR-IKE----T----------QEFIE---LLRE---E---GENE--LEIEKYEKE---LDQ---LYQ----ELL-F---LLSPE--ASDKAI-----VEIR----------------PGTGGEEAALFA------R-DLFRM-YTRYAERKGWN-------LEVAEI---H------ETDLGGIR-EVVFFVKGKNAYGILKY----------ESGVHRV---------QRVPVTE-------SG-------------------GRIHTSTAT-----VAVLPEIE-----------EKD---------IEIRPEDLKIE---TFRAS--G-----YVNKTESAV-RI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY-QNKQTA-LRIL-RAR--L----YQLQ-KEQK----EREISQ--------------R---S--EKIR---TYNFPQ-NRVTDHRINYT------SYR-----LQEILDGDLDEIISKLIEHDIEN------
17 HHSearch 83.1932% -58 - C4 -2B3T - RF1_ECOLI B:[12-350] --------------------------LHERH--------EEVQAL------LGDA-Q-------------------TI-ADQER------FRALSREYAQLSDVS-----------RCFTD-WQQV-----------------------------------------------------------QQLQVL-L-L---PKDPD--DERNAF-----LEVR----------------AGTGGDEAALFA------G-DLFRM-YSRYAEARRWR-------VEIMSA---S------EGEHGGYK-EIIAKISGDGVYGRLKF----------ESGGHRV---------QRVPATE-------SQ-------------------GRIHTSACT-----VAVMPELP----------DAEL---------PDVNPADLRID---TFRSS--G-AGGQHVNTTDSAI-RI--------------------T---------------------H------L-----P-----------------T---G-IVVECQDERSQH-KNKAKA-LSVL-GAR--I----HAAE-MAKR----Q--------RR--N----------S--DRNR---TYNFPQ-GRVTDHRINLT------LYR-----LDEVMEGKLDMLIEPIIQEHQAD------
15 HHSearch 81.1744% 17 - C4 -1GQE - RF2_ECOLI A:[30-364] --------------------------KKERL--------EEVNAE------LEQP-D-------------------VW-NEPER------AQALGKERSSLEAVV-----------DTLDQ-MKQGLEDV----------SGLLE---LAVEADDEETFNEAV--AELDALEEK---LAQ---LEF----R-R-M---FSGEY--DSADCY-----LDIQ----------------AGSGGTEAQDWA------S-MLERM-YLRWAESRGFK-------TEIIEE---S------EGEVAGIK-SVTIKISGDYAYGWLRT----------ETGVHRL---------VRKSPFD-------SG-------------------GRRHTSFSS-----AFVYPEVD----------DDID---------IEINPADLRID---VYRAS--G-AGGQHVNRTESAV-RI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH-KNKDQA-MKQM-KAK--L----YEVE-MQKK----NAEKQAM--ED--NKSDIGW----G--SQIR---SYVLDD-SRIKDLRTGVE------TRN-----TQAVLDGSLDQFIEASLKAGL--------
26 Fugue 78.0943% 23 - C4 -1GQE - RF2_ECOLI A:[4-365] INPVNNRIQDLTERSDVLRGYLDYDAKKERL--------EEVNAE------LEQP-D-------------------VW-NEPER------AQALGKERSSLEAVV-----------DTLDQMKQGLEDVS----------GLLEL---AVEAD-DEETFNEAV--AELDALEEK---LAQ---LEF----R-RMF----SGEY--DSADCY-----LDIQ----------------AGSGGTEAQDWA------SML--ERMYLRWAESRGFK-------TEIIEE---S------EGEVAGIK-SVTIKISGDYAYGWLRT----------ETGVHRL---------VRKSPFD-------SG-------------------GRRHTSFSS-----AFVYPEVD----------DDID---------IEINPADLRID---VYRAS--G-AGGQHVNRTESAV-RI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH-KNKDQAMKQ--MKAK--L----YEVEMQKKN----AEKQA--M-ED--NKSDIGW----G--SQIR---SYVLDDS-RIKDLRTGVE------TRN-----TQAVLDGSLDQFIEASLKAGL--------
3 PsiBlast_PDB 77.9844% 22 - C4 -1GQE - RF2_ECOLI A:[40-362] --------------------------------------------E------LEQP-D-------------------VW-NEPER------AQALGKERSSLEAVV-----------DTLDQ-MKQGLEDV----------SGLLE---LAVE--ADD-EETFN--EAVAELDALEEKLAQ---LEF----R-R-M---FSGEY--DSADCY-----LDIQ----------------AGSGGTEAQDWA------S-MLERM-YLRWAESRGFK-------TEIIEE---S------EGEVAGIK-SVTIKISGDYAYGWLRT----------ETGVHRL---------VRKSPFD-------SG-------------------GRRHTSFSS-----AFVYPEVD----------DDID---------IEINPADLRID---VYRAS--G-AGGQHVNRTESAV-RI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH-KNKDQA-MKQM-KAK--L----YEVE-MQKK----NAEKQAM--ED--NKSDIGW----G--SQIR---SYVLDD-SRIKDLRTGVE------TRN-----TQAVLDGSLDQFIEASLKAGL--------
6 PsiBlast_PDB 64.7036% 16 - C4 -1ZBT - RF1_STRMU A:[91-348] --------------------------------------------------------------------------------------------------------------------------------------------------------------KEEYE--EKLRFL---------------------L-L---PKDPN--DDKNII-----LEIR----------------GAAGGDEAALFA------G-DLLNM-YQKYAENQGWK-------FEVMEA---S------ANGVGGLK-EVVAMVSGQSVYSKLKY----------ESGAHRV---------QRVPVTE-------SQ-------------------GRVHTSTAT-----VLVM-PEV----------EEVE---------YEIDPKDLRVD---IYHA------------KVATAV-RI--------------------I---------------------H------L-----P-----------------T---N-IKVEMQEERTQQ-KNRDKA-MKII-RAR--VADHFAQIA-QDEQ----DA----TVGTG--DRSE-----------RIR---TYNF-PQNRVTDHRIGLT------LQK-----LDSILSGKLDEVIDALILYDQTQ------
1 PsiBlast_PDB 62.3745% 159 - C- -1ML5 RF2_ECOLI Z:[40-362] --------------------------------------------E------LEQP-D-------------------VW-NEPER------AQALGKERSSLEAVV-----------DTLDQ-MKQGLEDV----------SGLLE---LAVE--ADD-EETFN--EAVAELDALEEKLAQ---LEF----R-R-M---FSGEY--DSADCY-----LDIQ----------------AGSGGTEAQDWA------S-MLERM-YLRWAESRGFK-------TEIIEE---S------EGEVAGIK-SVTIKISGDYAYGWLRT----------ETGVHRL---------VRKSPFD-------SG-------------------GRRHTSFSS-----AFVYPEVD----------DDID---------IEINPADLRID---VYRTS--G-AGGQHVNRTESAV-RI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH-KNKDQA-MKQM-KAK--L----YELE-MQKK----NAEKQAM--ED--NKSDIGW----G--SQIR---SYVLDD-SRIKDLRTGVE------TRN-----TQAVLDGSLDQFIEASLKAGL--------
2 PsiBlast_PDB 61.7244% 159 - C- -1MI6 - RF2_ECOLI A:[40-362] --------------------------------------------E------LEQP-D-------------------VW-NEPER------AQALGKERSSLEAVV-----------DTLDQ-MKQGLEDV----------SGLLE---LAVE--ADD-EETFN--EAVAELDALEEKLAQ---LEF----R-R-M---FSGEY--DSADCY-----LDIQ----------------AGSGGTEAQDWA------S-MLERM-YLRWAESRGFK-------TEIIEE---S------EGEVAGIK-SVTIKISGDYAYGWLRT----------ETGVHRL---------VRKSPFD-------SG-------------------GRRHTSFSS-----AFVYPEVD----------DDID---------IEINPADLRID---VYRAS--G-AGGQHVNRTESAV-RI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH-KNKDQA-MKQM-KAK--L----YEVE-MQKK----NAEKQAM--ED--NKSDIGW----G--SQIR---SYVLDD-SRIKDLRTGVE------TRN-----TQAVLDGSLDQFIEASLKAGL--------
35 Fugue 54.2117% -18 - C5 -5A07 ? A:[40-434] ------------------------DHDAEVL--------DSIMDR------LHEP-L-------------------YE-KDTFD------PNEVLAENKQLYEEFLLQEISEPKVDNLVRS-GDPLAGKA----------KGTIL---SL-V--RNSDLEDII--SSIQQLEEE---YNKNFGYPY----T-F-L---NDEEFTDEFKDGI-----KSIL----------------PKDRVVEFGTIG------P-DNWNM-PDSI-DRERYD-------QEMDKM---SKENIQYAEVESYHN-MCRFYSKEFYHHPLLSK----------YKYVWRLEPNVNFYCKINYDVFQ-------FM-------------------NKNDKIYGF-----VLNLYDSP----------QTIETLWTSTMDFVEEHPNYLNVNGAFAWLKD--N-SQNPKNYDYTQGY-ST--------------------C---------------------H------F-----W-----------------T---N-FEIVD-LDFLRS-EPYEKY-MQYL-EEKGGF----YYER-WGDA----PVRSLAL--ALFADKSSIHWFRDIG--YHHT---PYTNCPTCPADSDRCNGNCVPGKFTPW-----SDLDNQNCQATWIRHSMSEEELEMY----
5 PsiBlast_PDB 52.3638% 151 - C- -2FVO - RF1_THEMA A:[30-327] ------------------------------------------------------------------------------------------------------AKI-----------EEIEN-ITNRIKET----------QEFIE---LLRE--EGENELEIE--KYEKELDQL---------YQE----L-L-F---LLSPE--ASDKAI-----VEIR----------------PGTGGEEAALFA------R-DLFRM-YTRYAERKGWN-------LEVAEI---H------ETDLGGIR-EVVFFVKGKNAYGILKY----------ESGVHRV---------QRVPVTE-------SG-------------------GRIHTSTAT-----VAVLPEIE----------EK-D---------IEIRPEDLKIE---TFRAS--G----------ESAV-RI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY-QNKQTA-LRIL-RAR--L----YQLQ-KEQK----EREISQ-------------------RSEKIR---TYNF-PQNRVTDHRINYT------SYR-----LQEILDGDLDEIISKLIEHDIEN------
34 Fugue 50.2217% -14 - C3 -4O2X - MALE_ECOLI A:[5-483] ----------EGKLVIWINGDKGYNGLAEVG--------KKFEKDTGIKVTVEHP-DKLEEKFPQVAATGDGPDIIFWAHDRFG------GYAQSGLLAEITPDK-----------AFQDK-LYPFTWDAVRYNGKLIAYPIAVEALSLIYN--KDLLPNPPKTWEEIPALDKE---LKA---KGK----S-A-LMFNLQEPY--FTWPLIAADGGYAFK----------------YENGKYDIKDVGVDNAGAK-AGLTF-LVDLIKNKHMN-------ADT-DY---S------IAEAAFNKGETAMTINGPWAWSNIDT----------SKVNYGV---------TVLPTFK-------GQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYE---------EELAKDPRIAA---TMENA--Q-KGEIMPNIPQMSA-FW--------------------Y---------------------A------V-----R-----------------T---A-VINAASGRQTVD-EALAAA-QTNA-AAN--L----EKIK-KLRNVITSAWKVILY--ND--DIHNFTY----V--TDVI---VKVVGQISKAKAHTITVE------AHSTGQALILSTWKSKAEKYCQELQQNGLTVSIIHES
21 HHSearch 47.8438% -27 - C4 -2JVA - ? A:[6-101] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NN---------VHLPDAEIELT---AIRAQ--G-AGGQNVNKVSSAM-HL--------------------R---------------------FDINASSL-----PPFYKERLLALNDSRITSD---GVIVLKAQQYRTQE-QNRADA-LLRL-SEL--I----VNAA-KLEH----HHHHH------------------------------------------------------------------------------------------
24 HHSearch 47.7633% -48 - C4 -2JY9 - ? A:[6-102] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RT---------VSIADNELEIT---AIRAQ--G-AGGQHVNKTSSAI-HL--------------------RFDIRASGLPEYYKQRLLTASHH------L-----I-----------------SDDGV-IIIKAQEFRSQE-LNREAA-IARL-VAV--I----KELT-AEQK----SRRATRP--TR--ASKERRL----S--SKAQ---KSSVKALRGKVRRPLDLE------HHH-----HHH--------------------------
28 Fugue 46.5414% -11 - C4 -3IBP A:[11-293] ---------------SVSNAREERMALRQEQ--------EQLQSR------IQSLMQ-------------------RA-PVWLA------AQNSLNQLSEQCGE-------------EFTS-SQDVTEYL----------QQLLE---RERE--AIVERDEVG--ARKNAVDEE---IER---LS--------------QPGG--SEDQRL-----NALA----------------ERFGGVLLSEI------------------------------------YDD---V------SLEDAPYF-SALY---GPSRHAIV------------------------------VPDLS-------QV-------------------TEHLEGLTD-----CP-----E----------DLYL---------IEGDPQSFDDS---VFSVD--ELEKAVVVKIADRQW-RY--------------------S---------------------R------F-----P-----------------E---V-PLFG-------R-AARESR-IESL-HAE--R----EVLS-ERFA----TLSFDVQ--KT--QRLHQAF----S--RFIGSHLAVAFESDPEAEIRQLNSR------RVE-----LERALSN----------------------
29 Fugue 45.7917% 1 * C7 *4RNZ ? A:[1-369] --------------------------MERLVWDKLTLLGFLEKNH------IPQK-L-------------------YY-NLSSQ------DKELSAEIQS-NVTY-----------YTLRD-ANNTLIQA----------LIPIS---Q-DL--QIHIYKKGE--DYFLDFIPII--FTR---KEK----T-L-L---LSLQT--SPYQDI-----IKAT----------------ND------PLLA------N-QLMNA-YKKSVPFKRLVKNDKIAIVYTRDYRVGQ------AFGQPTIK-MAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKY---TRISSPF-------SY-------------------GRFHRPHYG-----VDYAAKHG----------SLIH----------SASDGRVGFM---GVKAGYGK-VVEIHLNELRLVYAHM--------------------S---------------------A------F-----A-----------------N---G-LKKGSFVKKGQIIGRVGST-GPHL-HFG--V----YK----NSR----PINPLGY--IR--TAKSKLH----G--KQRE---VFLEKAQRSKQKLEELLK------THS-----FEKNSFYLLEGFLEHHHH-----------
7 PsiBlast_PDB 45.4333% -32 - C4 -2RSM - CL065_MOUSE A:[27-104] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ST-----VQVAGRKD----------YPAL---------LPLNESELEEQ---FVKGH--G-PGGQATNKTSNCV-VL--------------------K---------------------H------V-----P-----------------S---G-IVVKCHQTRSVD-QNRKIA-RKVL-QEK--V----DVFY-NSGP----SSG--------------------------------------------------------------------------------------------
20 HHSearch 45.2726% -24 - C4 -2RSM - CL065_MOUSE A:[4-111] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSS----------GKWGLRL---------QEKPALL-------FP-------------------G-MAASTVQ-----VAGRKDYP------------AL---------LPLNESELEEQ---FVKGH--G-PGGQATNKTSNCV-VL--------------------K---------------------H------V-----P-----------------S---G-IVVKCHQTRSVD-QNRKIA-RKVL-QEK--V----DVFY-NSGP----SSG--------------------------------------------------------------------------------------------
32 Fugue 43.2812% -8 - C7 -5BTB ? A:[5-371] --------------SELLLQATTALKQPKEL--------GYYSTN------VGGE-L-------------------KV-MDESNLSYYYLPDADIEKHIDLSAGA-----------RKFQD-EQAEAEDD----------TGSLH---GLLQ--TLMEYERRK--SKKVNADII---AFR---GQV----K-R-L---IHCAF--GGHATD-----VDMYVMSFDGQLFIRAARKKLEFPTSPRESWA------Y-LAYYS-GYKFERMALLD-------RPVAET---P------REVLESRG-KQVVR-NGPQYKTVVRT----------GVGEHKL---------VLGAEVDGIFDFREPT-------------------GDNLKHYVE-----LKVAKKVQ----------TLKD---------ATNFEQKLFSV---WLQCF--L-VG---INRVIIGF-RD--------------------E---------------------KFV----L-----K-----------------S---V-EEFSTSEIPLLL-NACVDA-IKWY-GAL--T----KWLC-ELPR----GPEDD----------------------FKLY---RLSCSRGALHLRQLHDED------LAN-----GDDII-------PGWFREWRRSLS-----
23 HHSearch 41.3027% -4 - C4 -1J26 - ICT1_MOUSE A:[13-108] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AS---------SYIPLDRLSIS---YCRSS--G-PGGQNVNKVNSKA-EVRFHLASADWIEEPVRQKIALT---------------------H------KNKINKA-----------------G---E-LVLTSESSRYQF-RNLAEC-LQKI-RDM--I----AEAS-GPSS----G----------------------------------------------------------------------------------------------