@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0944: (2015-12-04 )
MSKKAQKIAVPLISVVLGIILGAIIMLIFGYDPLWGYEGLFQTAFGSIKNIGEIFRAMGPLILIALGFSVASRAGFFNIGLPGQALSGWIAAGWFALSHPDMPRPAMILCTIIIGIVAGGITGAIPGILRAYLGTSEVIVTIMMNYIVLYSGNSIVQRVFPKSIMRTSDSSVYVSANASYQTDWLSSLTNNSRINIGIFIAIIAVVLVWFLLNKTTLGFEIRSVGLNPNASEYAGMSAKRTIILSMIISGAFAGLGGVVEGLGTFENVFVQPSSLAIGFDGMAVSLLAANSPIGILFAAFLFGVLSVGAPGMNIAGIPPELIKVVTASIIFFVGVHYIIEYVIKPKKQMKGGK

Atome Classification :

(16 SA) -------------------------....--.....10......--..20.--------......------.-----30.--.....-..40.....-.------..50........60..-----.....------.70........--80..-......90........100--------------.......----..110....--...120....-----------.---..130-....---------...140.......150.......160-.......--------170------........180.......190.....-------..200.......--210---........220.......230-------.......240....-----...250---------------------------.....-------....260.......270.......280--.-----........290.------.------------......300..------------.-.....310-----.......-------.--------------------------320....-------------..--.330....-.---..340....-----...350.-------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------MSKK--AQKIAVPLISVVL--GIILG--------AIIMLI------F-----GYD--PLWGY-EGLFQTAFG-S------IKNIGEIFRAMGPLIL-----IALGF------SVASRAGFFNI--GLPG-QALSGWIAAGWFALSHP----------------DMPRPAM----ILCTIIIGI--VAGGITGAIP-----------G---ILRAY-LGTS---------EVIVTIMMNYIVLYSGNSIVQRVFPK-SIMRTSD--------SS-------VYVSANASYQTDWLSSLTNNSRINIG-------IFIAIIAVVLVW--FL----LNKTTLGFEIRSVGLNPNASE-------YAGMSAKRTIILSM-----IISG-----------------------------AFAGL-------GGVVEGLGTFENVFVQPSSLAIGFD----G-----MAVSLLAANS-P------I------------GILFAAF-LFG------------V-LSVGAPG------MNIAGIP-------P--------------------------ELIKVVT-------------AS--IIFFVGVH-Y---IIEYVIKPK-----KQMKGGK-------
10 Fugue 95.2819%-127 - C1 -4CZB NAH1_METJA A:[1-415] ------MELMMAIGYLGLALVLGSLVAKI--AEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEI------F-----EYA--GPIGLIFILLGGAFTMR------ISLLKRVIKTVVRLDT-----ITFLI------TLLISGFIFNMVLNLPY-TSPVGYLFGAITAATDP----------------ATLIPVFSRVRTNPEVAITL--EAESIFNDPL-----------G---IVSTS-VILGLFGLFSSSNPLIDLITLAGGAIVVGLLLA-KIYEK-IIIHC-D--------FH-------EYVAPLVLGGAMLLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGD--AL----FRADDIDYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENY-----FIPG-----------------------------LLVAL-------GSIF---------LARPLGVFLGLI----GSKHSFKEKLYFALEG-P------R------------GVVPAAL-AVT------------VGIEILKNA------DKIPASI-------T--------------------------KYITPTD-------------IA--GTIIIGTF-M---TILLSVILE-----ASWAGMLALKLLGE
11 Fugue 90.9522%-134 * C5 *2XBG - YC48L_THEEB A:[38-345] -----------AIPALDYNPWEAIQLPTT--ATILDMSFIDRHH--GWLVG--------VNATLM------E-----TRDGGQTWEP-RTLVLDH---------------------------------------------SDYRFNSV--SFQG-N--EGWIVGE---------------------------PPI----MLHTTDGGQSWSQIPLDPKLP-----------GSPRLIKALGNGSA---------EMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLN--------RSPSGEY--VAVSSRGSFYSTWEPGQTA-------------------------W--EP----HNRTT-SRRLHNMGFTPDGR-------------------LWM-----IVNG-----------------------------------------GKIAFSDPDNSENWGELLS-PLRRN----S-----VGFLDLAYRT-P------N------------EVWLAGG-AGA------------L-LCSQDGGQTWQQDVDVKKVP-------S--------------------------NFYKILF-------------FSPDQGFILGQKGI---LLRYVTDLT-----AA------------
13 Fugue 88.2119%-140 * C3 *4XD1 ? A:[21-417] --------------------MKLIIAGKN----NIAVDVTKWII--KTISD--------IELYSV------CNENDHGND--SFQLS-FKKFCIQFNIP------IISLEDAYH-LEDAIF-----LSLEFDKIIHPSKFTHNRIFNI--HFSYLPAYKGMYTSAWPILNNE------------------QESGV----TLHKIDHGI--D----TGAII-----------D---QQKFP-LDIE---------ETAKTLYLKYIKI--GTEIVIKNLPA-LISGNYSIVEQSAIKSS-------YYSKKSIDYKNLMIDLNKTAHEILQQ-------IRAFTFRDYQLP--RI----DDIDIFHGEILSSKSLSKPGT-------ILEKNNYHLILSTIDYDIKLYSD-----------------------------NFDEI-------LTACED-KSPEFISKLLKTENILFEKNHLG-----ASPIIIAAYHGN------M------------DVIEWLV-SKGVNINDRNYKGTTV-AMYFKDY------MLRSGNY-------T--------------------------GLENLIN-------------LG--LDLFLKDN-EGLSVFDYMRKNKNIELFNFMSTFN-------
17 Fugue 85.7317%-125 * C2 *4U1D - EIF3A_YEAST A:[9-496] FRPENAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVE--PVVFK--------FLEIGVELKKGKL-----LKD--GLHQY-KKLIQGSTE-G------LVSVGAVARKFIDLVE-----SKIAS------EQTRADELQKQ--EID---AITSWLRFTWESYRAVL---------------DLLRNNA----LLEITYSGV--VKKTMHFCLKYQRKNEFKRLAE---MLRQH-LDAA---------NYQQSKSGNNLVDLSDADTLQRYLDQ-RFQQVDV--------SVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLAN-------YYENLVKVFFVSGDPL----LHTTAWKKFYKLYSTNPRATE-------EEFKTYSSTIFLSA-----ISTQLDEIPSIGYDPHLRMYRLLNLDAKPTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNFDVDTVKQ----Q-----LENLLVKLSS-KTYFSQYI------------APLRDVI-MRR------------V-FVAASQK------FTTVS-Q-------S--------------------------ELYKLATLPAPLDLSAWDIEKS--LLQAAVED-Y---VSITIDHES-----AKVTFAK-------
14 Fugue 74.0913%-114 - C3 -3QNQ ? A:[3-434] -----------RFLEKYVMPVAGKVAEQR--HLLAIRDGLVLTM--PFLII--------GSIFLI------I-----STL--PIPGY-SEFMASLFG-KNWNVALGYPVSATFNIMALIAV-----FGIAY------RLGEYYKVDAL--ASGA-LSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQG----LFVAMIIAI--ISTEIYRFLV-----------Q---KKMII-KMPE---------TVPPAVTRSFAALIPGFIVVTVVWII-RLIFEHT--------T---------FGSIHNVVGKLLQEPLSILGASLWG-------AVIAVILVHVLW--ACGIHGATIVGGVMSPIWLSLMDQNRI-------AFQAGQDVPNTITA-----QFFD-----------------------------LWIYM-------GGSGATLALVVGMLLFARSQQLKSL----GRLS--IAPGIFNINE-M------VTFGMPIVMNPLLLIPFIVV-PVV------------L-TIVSYFA------MEWGLVA-------RPSGAAVTWTTPILFSGYLGSGGKISGVILQLVN-------------FA--LAFVIYLP-F---LKIWDKQKI-----AEEKGEA-------
18 Fugue 73.0514%-105 - C2 -1T5J Y1187_METJA A:[3-303] -------------------------LVKM--RDKILGSVFGAVI--GDALG--------MPTE---------------------NLT-KEEIKKLYG-F------VDSYVEPKNYLAGKLNKGEWTDDTEQ------AICLIKSLTKE--GIDI-KKFANCLIA-WKNKNPP----------------DIGLTSL----MAIDKLENN--DYSGVDS---------------------------------------------------SSCGAAMRIYPL-GIVFHNN--------------------LKKLKEEVIKASKITHNN--KTA-------IAGALAIAFFVS--SA----LKDRKDFSLLDECYNYIKDID-------EEFAKKLLEIKNFN-----NLDY-----------------------------IYDYF-------G---TGVKTDEVVPSAIATYLLTDN----F-----KEGMLKCINA-G------G------------DTDSLAS-MYG------------A-MAGAYYG--------FKNIP-------K--------------------------EWIDGLK----------------------NKE-V---IFELAERLY-----HLATE---------
3 PsiBlast_PDB 54.9528% -67 - C4 -4NV2 VKOR_SYNJB A:[19-127] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SR-----LILA-----------------------------ILAGL-------GSLLTAYLTYTKLTEQPAAFATGDG----G-----CDLVLSSRWA-EF-----L------------GIPTAAVGLLG------------F-LGVLALA------VLPD--PLVKRWRWP--------------------------ALFGLVS-------------AM--TAFEMYML-Y---LMVAVLRQF-----CMYCTTA-------
4 PsiBlast_PDB 52.4128% -56 - C4 -4NV5 VKOR_SYNJB A:[19-127] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SR-----LILA-----------------------------ILAGL-------GSLLTAYLTYTKLTEQPAA-----G----G-----CDLVLSSRWA-EF-----L------------GIPTAAVGLLG------------F-LGVLALA------VLPD-LPLVKRWRWP--------------------------ALFGLVS-------------AM--TAFEMYML-Y---LMVAVLRQF-----CMYCTTA-------
19 Fugue 41.3119%-100 - C5 -1PFS - G5P_BPPF3 A:[1-78] -----------------------------------------------------------------------------------------------------------------------MN-----IQITF------TDSVRQGTSAK--GNPY-TFQEGFL-------HLE----------------DKPHP------LQCQFFVES--VIPAGSYQVP-----------Y---RINVN-NGRP---------ELAFDFKAMKRA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 39.3930% -39 - C4 -4U89 ? A:[172-224] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFCAKEATYKAW--FP----LTKRWLGFEDAHITFETDSTG-------WTGRFVSRILIDGS-----TLSG-----------------------------PPLTT-------LRGRWSVERGLVLTAIVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 39.3630% -40 - C4 -4QVH ? A:[523-575] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFCAKEATYKAW--FP----LTKRWLGFEDAHITFETDSTG-------WTGRFVSRILIDGS-----TLSG-----------------------------PPLTT-------LRGRWSVERGLVLTAIVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 HHSearch 32.7615% 21 - C4 -2NQ2 - Y1471_HAEIN A:[214-253] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSWRLNLLSLDEKEAK-------ALGVKMAPLRWLVI-----FLSG-----------------------------SLVAC-------QVAISGSIGWVGLIIPHLSRMLVGA----N-----HQSLLPCTML-V------G------------ATYMLLV-DNV------------A-RSLSDAE------IPISILT-------A--------------------------LIGAPLF-------------GV--LVYKL------------------------------------
5 HHSearch 25.6310% 47 - C4 -2QI9 - BTUC_ECOLI A:[206-246] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQSRPMNMLALGEISAR-------QLGLPLWFWRNVLV-----AATG-----------------------------WMVGV-------SVALAGAIGFIGLVIPHILRLSGLT----D-----HRVLLPGCAL-A------G------------ASALLLA-DIV------------A-RLALAAA------ELPIGVV-------T--------------------------ATLGAPV-------------FI--WLLLKA-----------------------------------
9 HHSearch 25.4224% 185 - C4 -2HI7 DSBB_ECOLI B:[143-162] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--------------------------QW-LLGI-------------FI--AYLIVAVL-V---VI--------------------------
12 Fugue 8.5827% 244 - C4 -4UE4 - ? B:[1-22] -----------------------------------------------------------------------------------------------------------------------------------------------LFLLT--VCTT-VLVSGWVVLGWME------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 HHSearch 4.2320% 345 * C4 *2L6W - PGFRB_HUMAN A:[23-37] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISLII-L---IMLWQKKPR-----YE------------