@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs1105: (2015-12-05 )
MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK
Atome Classification :
(20 SA)
---------------------------------------------------.........-------------10...---.....20....----..--------------..30----------......----..---------.40--......-..50-..---.......--60.....------------.-----..70........80------.....-----------------------------------..-..90-----..--------------------.---..---..-----.100-------...---------.....110------------..--------.--.-----..-...120.------------------...--..--------------------.130-----------------------.......140..-..-...150..-------.....160---..-----..--..------------------.170.......------.-------------------180..----------------.....---------190........200--.....--....210....-.------------------..220.......230..--.---....240....-....---250-...--..----...260.....-..270---.---------.......280....-.-----..290-----.---...-------------.-...-----300.......310-..----------....--..--.-320...----------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------M
M
D
F
Y
I
K
Q
I
-------------
I
I
HQF---SPND
T
E
L
V
LSD----T
P
--------------
L
T
L-----------TPR
I
D
D
----
Y
F
---------
R
K
K
--
L
S
K
V
F
S
-
D
E
A--KR---GYFGE
D
N
--
V
F
M
S
H
L
Q------------D-----DLY
V
S
S
C
Q
I
A
Q
L
W
-------
K
E
E
F
V
-----------------------------------IS-EDQK-----TN--------------------
D
---
L
V
---
F
I
-----
Q
FD--------KDG---------
M
E
H
F
A
F
--------------
L
R
--------
I
--
S
-----
L
K
-
E
Q
F
A
H
VS------------------ENQ--EQ--------------------
P
I
T
I
-----------------------TQNNLPSAAQTP-D
E
-
A
L
V
V
NKSS-------
K
Q
Y
Y
L
I
E
K
---
R
I
-----KH--NG------------------
S
F
-
A
N
Y
F
S
E
N
L
------L-------------------QVQ
P
E
----------------
Q
S
V
K
K
---------
S
-
I
K
M
V
E
Q
T
A
Q
K
----
I
A
E
NF--NKDD
F
S
F
Q
S
K
M
-
K
------------------
S
A
I
Y
K
N
L
E
E
E
QEL
S
P
E
K
--
L
---
A
D
Q
L
FD-DNL
T
-
A
R
L
T
---
F
V
--
D
E
L
--
K
D
----AIPGP
V
Q
VSDI-
D
H
S
R
----
Q
---------
I
K
K
L
ENQKLSLSN
G
-
I
-----
E
L
I
-V-----P---NNV-------------Y-QDA-----
E
S
V
E
F
IQNPDG---
T
Y
----------
S
I
L
I
--
K
N
--
I
-
Q
D
IQNK----------------------------
19
Fugue
76.67
18%
-2
* C10 *
4P5W
1
CMC2_HUMAN
A:
[31-394]
-------------------------------------------------TK
R
A
D
P
A
E
L
R
T
-------------
I
F
L
K
Y
---
A
S
I
E
K
N
G
E
F
F
M
----
S
P
--------------
N
D
F
-----------
V
T
R
Y
L
N
----
I
F
---------
S
Q
P
--
N
P
K
T
V
E
-
L
L
S
--
G
V
---
V
D
Q
T
K
D
G
--
L
I
------------------------------
S
F
Q
E
F
V
-------
A
F
E
S
V
-----------------------------------
L
C
-
A
P
D
A
-----
L
F
--------------------
M
---
V
A
---
F
Q
-----
L
F
D
--------
K
A
G
KGEVT
F
E
D
V
K
Q
V
F
G
Q
--------------
T
T
--------
I
--
H
-----
Q
H
-
I
P
F
N
W
D
S
------------------
E
F
V
--
Q
L
--------------------
H
F
G
K
-----------------------
E
R
K
R
H
L
T
Y
A
E
F
T
-
Q
F
-
L
L
E
I
Q
L
E
H
-------
A
K
Q
A
F
V
Q
R
---
D
N
-----
A
R
--
T
G
------------------
R
V
T
A
I
D
F
R
D
I
M
------
V
-------------------
T
I
R
P
H
----------------
V
L
T
--------------
P
F
V
E
E
C
L
V
A
----
A
A
G
G
T
TS
H
Q
V
S
F
S
Y
F
N
G
F
-
N
------------------
S
L
L
N
-
N
M
E
L
I
R
K
I
Y
-
S
T
--
L
---
A
G
T
R
K
D
-
V
E
V
T
--
K
E
E
---
F
V
--
L
A
A
--
Q
K
------
F
G
Q
V
T
P
M
E
V
-
D
I
L
F
----
Q
---------
L
A
D
L
Y
E
P
R
G
R
M
T
L
A
D
I
-----
E
R
I
-
A
-----
P
---
P
N
------------------------------
P
D
H
V
G
---
G
Y
----------
K
L
A
V
--
A
T
--
F
-
A
G
I
E
N
K
FGLYL-----------------------
27
Fugue
65.29
19%
-8
- C4 -
4FDW
19
?
A:
[21-401]
-------------------------------------------------AS
L
E
D
F
S
I
E
Q
L
----------------------
P
A
K
T
I
Y
A
L
G
E
NIDL
T
G
--------------
L
N
V
-----------
T
G
K
Y
D
D
----
G
----------
K
Q
R
--
P
V
K
V
T
S
-
E
Q
I
--
S
G
FSS
S
V
P
V
D
K
Q
--
E
V
T
I
T
I
E
------------
G
-----
K
Q
K
S
F
S
V
H
I
S
P
V
R
-------
V
E
N
G
V
-----------------------------------
L
T
-
E
I
L
K
-----
G
Y
--------------------
N
---
E
I
---
I
L
P
NSVK
S
I
P
--------
K
D
A
---------
F
R
N
S
Q
I
--------------
A
K
--------
V
--
V
-----
L
N
-
E
G
L
K
S
I
G
D
MAFFNSTVQ
E
I
V
F
P
STL
E
Q
L
--
K
E
--------------------
D
I
F
Y
-----------------------
Y
C
Y
N
L
K
K
A
D
L
S
K
-
T
K
-
I
T
K
L
P
A
S
T
-------
F
V
Y
A
G
I
E
E
---
V
L
L
P
VTL
K
E
--
I
G
------------------
S
Q
-
A
F
L
K
T
S
Q
L
------
K
-------------------
T
I
E
I
P
----------------
E
N
V
S
T
IGQEAFRES
G
-
I
T
T
V
K
L
P
--
N
----
G
V
T
N
I
--
A
S
R
A
F
Y
Y
C
P
E
L
---------------------
A
E
V
T
T
Y
G
S
T
F
N
D
D
P
E
A
M-
I
---
H
P
Y
C
L
E
-
G
C
P
K
L
A
R
F
E
---
I
P
--
E
S
I
--
R
I
L
G
Q
G
L
L
G
G
N
R
K
V
T
Q
L
-
T
I
P
A
----
N
---------
V
T
Q
I
N
F
S
A
F
N
N
T
G
I
-
K
-----
E
V
K
-
V
EGTT-
P
---
P
Q
V
-------------
F
-
E
K
V
WYGFP
D
D
I
T
V
I
R
V
P
A
E
---
S
V
----------
E
K
Y
K
--
N
A
N
G
W
-
R
D
F
T
N
K
ITTF------------------------
22
Fugue
64.86
22%
-12
- C8 -
4CI7
12
?
A:
[4-470]
-----------------------------------G
S
H
K
T
LDG
V
E
T
A
E
Y
S
E
S
Y
L
Q
Y
L
E
D
V
K
N
GDTAKYNGVIP
F
P
H
E
M
E
G
T
T
L
R
K
S
S
V
A
Y
N
P
----
M
D
--------------
L
G
L
-----------
T
T
P
A
K
N
QGSL
N
T
---------
A
W
S
--
F
S
G
M
S
T
-
L
E
A
Y
L
K
L
---
K
G
Y
G
T
Y
D
--
L
S
E
E
H
L
R
W
W
A
TGGKYG
W
N
L
D
-----
D
M
S
G
S
S
N
V
T
A
I
G
Y
L
T
A
WAGP
K
L
E
K
D
-----------------------------------
I
P
-
Y
N
L
K
-----
S
E
AQGATKPSNMDTAPTQ
F
N
V
T
D
---
V
V
---
R
L
-----
N
K
D
--------
K
E
T
---------
V
K
N
A
I
M
--------------
Q
Y
--------
G
--
S
-----
V
T
-
S
G
Y
A
H
Y
S
------------------
T
Y
F
--
N
K
--------------------
D
E
T
A
Y
N
C
TNKRAPLN
H
A
V
A
IVGWDDNY
S
K
D
N
F
A
S
D
V
K
P
E
-
S
N
-
G
A
W
L
V
K
S
S
WGEFNSM
K
G
F
F
W
I
S
Y
---
E
D
-----
K
T
L-
L
T
------------------
D
T
-
D
N
Y
A
M
K
S
V
------
S
-------------------
K
---
P
----------------
D
S
D
K
K
---------
M
-
Y
Q
L
E
Y
A
G
L
S
K
----
I
M
S
N
------------
K
V
-
T
------------------
A
A
N
V
F
D
F
S
R
D
----
S
E
K
--
L
---
D
S
V
M
F
E
T
D
S
V
G
-
A
K
Y
E
V
--
Y
Y
--
A
P
V
--
V
N
----
G
V
P
Q
N
N
S
M
T
K
L
-
A
S
G
T
VSYS
G
---------
Y
I
N
V
P
T
N
S
Y
S
L
P
K
G
-
K
-----
G
A
I
-
V
V
V
I
D
N
T
---
A
N
P
-------------
N
-
R
E
K
-----
S
T
L
A
Y
E
T
D
I
D
G
---
Y
Y
L
Y
E
A
K
A
N
L
GE
S
Y
I
L
--
Q
N
NK
F
-
E
D
I
N
T
Y
SEFSPCNFV
I
K
A
I
T
K
T
S-----------
25
Fugue
62.92
18%
-14
- C10 -
4XR7
-
PAN3_YEAST
B:
[1-456]
---------------------------------------------------
M
H
S
L
L
Q
Y
R
S
-------------
A
D
Q
L
F
---
I
P
N
N
I
R
E
D
L
T
K
----
K
N
--------------
L
S
I
L
QVFPSSGKVI
P
S
I
V
Q
D
----
Y
F
NLVPLNFNN
K
T
T
--
L
F
K
V
F
S
-
N
Y
D
--
G
K
---
A
Y
V
L
K
R
L
--
P
N
I
D
K
S
M
------------
N
-----
P
N
K
I
S
--
K
I
Y
Q
I
W
-------
S
K
I
N
C
TN
L
I
K
F
R
D
---------------------------
I
F
-
Q
T
T
K
-----
F
G
--------------------
D
L
S
I
C
L
---
V
F
-----
D
Y
Y
--------
P
N
S
---------
L
S
L
Y
D
Y
HFVNFPKFPIT
N
N
Y
L
W
--------
I
--
Y
-----
L
V
-
Q
L
T
N
V
I
N
------------------
S
I
H
--
S
Q
NLSIGNTLNWRKVLITGDPG
R
I
K
L
-----------------------
S
H
C
N
F
M
D
L
L
F
N
D
-
D
T
-
D
T
V
V
--
S
S
-------
T
I
E
G
Q
Q
Q
L
---
D
Y
-----
K
Y
--
L
G
------------------
E
L
-
L
F
N
L
S
I
N
I
------
E
N
S
NNN
T
A
P
K
E
Y
R
LEEIT
P
Q
S
I
D
D
M
----------------
R
Q
I
D
D
---------
K
-
F
K
D
V
L
K
Y
L
I
S
----
D
N
G
D
S
--
K
K
S
I
H
D
L
T
S
H
F
-
Y
------------------
D
K
M
F
M
V
L
E
S
S
Q
T
Y
T
E
Y
M
--
E
---
S
V
L
S
R
E
-
L
E
N
G
-
R
L
F
R
---
L
V
--
N
K
L
--
N
C
----
I
F
G
R
I
E
S
R
I
D
I
-
N
W
S
E
----
S
GTK
F
P
I
I
L
F
Y
D
Y
V
F
H
Q
V
D
S
N
G
K
P
-
I
M
D
L
T
H
V
L
R
-
C
-----
L
---
N
K
L
-------------
D
-
A
G
I
-----
Q
E
K
L
M
L
V
T
P
D
E
---
L
N
----------
C
I
I
I
S
Y
K
E
--
L
-
K
D
L
I
E
S
T
F
R
S
I
T
Q
H--------------------
24
Fugue
62.25
16%
4
- C7 -
4MND
4
DIPPS_ARCFU
A:
[40-457]
------------------------------L
M
K
A
V
I
L
A
A
G
LGGGVPKPLVR
V
G
G
C
E
I
I
L
R
-------------
T
M
K
L
L
---
S
P
H
V
S
E
F
I
I
V
A
----
S
R
--------------
Y
-------------
A
D
D
I
D
A
----
F
L
---------
K
D
K
GF
N
Y
K
I
V
R
H
D
R
P
--
E
K
---
G
N
G
Y
S
L
L
--
V
A
K
N
H
V
E
------------
D
-----
R
F
I
L
T
M
G
D
--
H
V
Y
-------
S
Q
Q
F
I
E
K
A
V
R
GE
G
V
I
A
D
REPRFVDIGEAT
K
I
R
V
E
DGRVAK
I
G
-
K
D
L
R
-----
E
F
--------------------
D
---
C
V
DTG
F
F
-----
V
L
D
--------
D
S
I
---------
F
E
H
A
E
K
--------------
L
R
--------
D
--
R
-----
E
E
-
I
P
L
S
E
I
V
------------------
K
L
A
--
R
L
--------------------
P
V
T
Y
-----------------------
V
D
G
E
L
W
M
D
V
D
T
K
-
E
D
-
V
R
R
A
N
R
A
L
-------
V
S
A
A
V
G
D
G
---
F
I
-----
S
R
KI
N
R
------------------
K
I
-
S
T
R
I
S
A
A
I
------
V
N------------------
K
V
N
P
N
----------------
Q
M
T
L
I
---------
S
-
F
L
V
G
A
F
S
A
L
A
----
S
F
--
F
--
S
I
P
L
A
G
L
L
Y
Q
F
-
S
------------------
S
I
L
D
G
C
D
G
E
I
A
R
A
S
L
K
M
--
S
---
K
K
G
G
Y
V
-
D
S
I
L
-
D
R
F
V
D
F
L
F
L
--
A
I
I
--
A
L
----
L
Y
P
K
T
A
T
V
A
M
F
A
I
F
G
S
----
V
---------
M
V
S
Y
T
S
E
K
Y
K
A
E
F
G
-
E
-----
S
I
R
-
V
-----
L
---
N
Y
I
-------------
P
G
K
R
D
-----
E
R
I
F
L
I
M
I
F
C
L
---
L
S
----------
A
I
S
L
--
Q
W
--
I
-
F
W
M
F
L
F
V
A
A
I
S
L
T
R
V
V
V
T
L
L
A
V
L
V
S---------
21
Fugue
59.23
12%
-32
- C3 -
2HVG
8
?
A:
[21-478]
--------------------HLKNISPIDGRYKKACGELSAFFS
E
H
A
L
I
K
H
R
I
I
V
E
V
R
W
L
-------------
L
F
L
N
E
---
E
E
L
F
F
E
K
V
T
D
H
----
S
V
--------------
E
V
L
-----------
N
Q
I
A
T
N
----
I
T
---------
D
S
D
--
I
A
R
V
K
A
-
I
E
H
-----------
D
V
K
--
A
V
E
Y
F
V
K
------------
E
-----
K
L
K
N
S
K
R
E
D
L
L
K
I
-------
K
E
Y
V
H
-----------------------------------
Y
L
C
T
S
E
D
-----
I
N
--------------------
N
---
V
A
---
Y
A
-----
T
C
L
--------
K
A
C
---------
L
N
D
V
V
I
--------------
P
C
--------
L
--
E
-----
K
I
M
L
K
L
K
D
L
A
------------------
V
E
Y
--
S
H
V
-------------------
P
L
L
S
-----------------------
R
T
H
G
Q
P
A
S
S
T
T
F
G
K
E
M
A
N
F
Y
A
R
I
H
-------
H
H
V
G
V
I
R
R
V
K
V
C
A
-----
K
F
--
N
G
AVGNF
N
A
H
K
V
A
SKDTD
W
V
N
T
-
I
G
L
F
L
K
K
H
------
F
-------------------
N
L
T
Y
S
IYCTQIQDH
D
Y
I
C
E
L
C
D
G
L
A
R
---------
A
-
N
G
T
L
I
D
L
C
V
D
----
I
W
L
Y
I
--
S
N
N
L
L
K
L
K
S
S
T
M
P
HKVNP
I
D
F
E
N
A
E
G
N
L
H
I
A
N
A
F
F
K
L
F
S
S
K
L
P
T
S
R
L
Q
RD
L
---
S
D
S
T
V
L
-
R
N
I
G
-
S
S
L
A
---
Y
C
--
L
I
A
--
Y
K
----
S
V
L
K
G
L
N
K
I
D
I
-
D
R
R
N
----
L
---------
E
E
E
L
N
Q
N
W
S
T
L
A
E
P
-
I
-----
Q
I
V
M
K
-----
R
H
NY
V
D
A
-------------
Y
-
E
E
L
-----
K
Q
F
T
R
G
K
V
I
D
Q
---
K
I
M
---------
Q
E
F
I
--
K
T
--
K
C
A
F
L
P
Q
D
V
V
D
Q
L
L
E
LTPATYTGY
A
D
Y
L
A
K
N
V
ERLS
18
Fugue
55.26
14%
5
- C6 -
3LLS
8
?
A:
[50-475]
---------------------PQPETLRRYRAGEPPLT
G
S
L
L
I
G
G
A
G
RV
V
E
P
L
R
A
A
L
E
K
D
-------------
Y
D
L
V
G
---
N
D
S
F
G
G
L
V
F
D
A
----
T
G
--------------
I
T
----------------
E
P
----
A
G
---------
L
K
G
--
L
H
E
F
F
T
-
P
V
L
--
R
N
---
L
G
R
C
G
R
V
--
V
V
V
G
G
T
P
------------
E
-----
A
A
A
S
T
N
E
R
I
A
Q
R
A
-------
L
E
G
F
T
-----------------------------------
R
S
-
L
G
K
E
LRRG
A
T
T
--------------------
A
---
L
V
---
Y
L
-----
S
P
D
AKPAATGL
E
S
T
---------
M
R
F
L
L
S
--------------
A
K
SAYVDG
Q
V
F
--
S
-----
V
G
-
A
D
D
S
T
P
P
------------------
A
D
W
--
E
K
--------------------
P
L
D
G
-----------------------
K
V
A
I
V
T
G
A
A
R
G
I
-
G
A
-
T
I
A
E
V
F
A
R
-------
D
G
A
H
V
V
A
I
---
D
V
-----
E
S
--
A
A
------------------
E
N
-
L
A
E
T
A
S
K
V
G
G
T
A
L
W
L
-------------------
D
V
T
A
D
----------------
D
A
V
D
K
---------
I
-
S
E
H
L
R
D
H
H
G
G
KADI
L
V
N
N
A
--
G
I
T
R
D
K
L
L
A
N
M
-
D
------------------
D
A
R
W
D
A
V
L
A
V
N
L
L
A
P
L
R
--
L
---
T
E
G
L
V
G
-
N
G
S
I
-
G
E
G
G
---
R
V
--
I
G
L
S
S
I
A
----
G
I
A
G
N
R
G
Q
T
N
Y
-
A
T
T
K
----
A
G
M
I
G
I
----
T
Q
A
L
A
P
G
L
A
A
K
G
I
T
-
I
-----
N
A
V
-
A
-----
P
---
G
F
I
ERRLNSLL
Q
G
G
Q
P
V
-
D
V
A
-----
E
A
I
A
Y
F
A
S
P
A
S
NAV
T
G
----------
N
V
I
R
--
V
C
--
G
-
Q
A
M
I
G
A
----------------------------
26
Fugue
52.67
14%
-8
- C5 -
4ZOX
-
SQT1_YEAST
A:
[3-381]
MSNNSL
T
Y
F
D
KHTDSVF
A
I
G
H
H
PNLP
L
V
C
T
G
GGDN
L
A
H
L
W
T
SHSQPPKFA
G
T
L
T
G
Y
G
E
S
V
-------------
I
S
C
S
F
---
T
S
E
G
G
F
L
V
T
A
D
----
M
S
G
K
V
L
V
H
M
G
Q
KGGAQ
W
K
L
-----------
A
S
Q
M
Q
E
----
V
E
---------
E
I
V
--
W
L
K
T
H
P
-
T
I
A
--
R
T
---
F
A
F
G
A
T
D
G
S
V
W
C
Y
Q
I
N
------------
E
QDG
S
L
E
Q
L
M
S
G
F
V
H
Q
Q
D
C
-------
S
M
G
E
F
-----------------------------------
I
N
-
T
D
K
G
-----
E
N
--------------------
T
---
L
E
---
L
V
-----
T
C
S
--------
L
D
S
-----------
T
I
V
A
--------------
W
N
--------
C
--
F
-----
T
G
-
Q
Q
L
F
K
I
T
------------------
Q
A
E
IK
G
L
--------------------
E
A
P
W
-----------------------
I
S
L
S
L
A
P
E
T
L
T
K
-
G
N
-
S
G
V
V
A
C
G
S
-------
N
N
G
L
L
A
V
I
---
N
C
-----
N
N
--
G
G
------------------
A
I
-
L
H
L
S
T
--
V
------
I
-------------------
E
L
K
P
E
----------------
Q
D
E
L
D
---------
A
-------
S
I
E
S
----
I
S
W
S
S
--
K
F
S
L
M
A
I
G
L
V
C
-
G
------------------
E
I
L
L
Y
D
T
S
A
W
R
V
R
H
K
F
V
--
L
---
E
D
S
-------
V
-
T
K
L
M
---
F
D
ND
D
L
F
--
A
S
----
C
I
N
G
K
V
Y
Q
F
N
A
-
R
T
G
Q
----
E
---------
K
F
V
C
V
G
H
N
M
G
V
L
D
--
F
-----
I
L
L
-
H
-----
P
---
V
A
N
-------------
T
-
G
T
E
-----
Q
K
R
K
V
I
T
A
G
D
E
---
G
V
----------
S
L
V
F
--
E
V
--
P
-
N
---------------------------------
5
PsiBlast_PDB
44.58
25%
36
- C9 -
1Y4U
-
HTPG_ECOLI
A:
[414-489]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
S
-----
L
E
-
D
Y
V
S
R
M
K
------------------
E
G
Q
--
E
K
--------------------
I
Y
Y
I
-----------------------
T
A
D
S
Y
A
A
A
K
S
S
P
-
H
L
-
E
L
-
L
R
K
K
G
-------
I
E
V
L
L
L
S
D
---
R
I
---------
D
E
------------------
W
M
-
M
N
Y
L
T
E
--------
F
-------------------
D
G
K
P
F
----------------
Q
S
V
S
K
---------
V
-
D
E
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
43.68
24%
5
- C9 -
1FOB
-
GANA_ASPAC
A:
[198-266]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-----
T
G
--------------------
E
---
L
L
---
S
T
-----
D
F
D
--------
Y
F
G
---------
V
S
Y
Y
P
F
--------------
Y
S
--------
A
--
S
AT
L
A
S
L
K
-
T
S
L
A
N
L
Q
------------------
S
T
Y
--
D
K
--------------------
P
V
V
V
-----------------------
V
E
T
N
W
P
V
S
C
P
N
P
-
A
Y
-
A
F
P
S
D
L
S
S
-------
I
P
F
S
V
A
G
Q
---
Q
E
-----
F
L
--
E
K
------------------
L
A
-
A
V
V
E
A
T
T
D
------
G
-------------------
L
G
V
Y
Y
----------------
W
E
P
A
W
---------
I
-
G
N
A
G
L
G
S
S
C
A
----
D
N
L
M
V
--
D
Y
T
T
D
E
V
Y
E
S
I
-
E
------------------
T
L
G
E
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
43.55
25%
29
- C9 -
1Y4S
-
HTPG_ECOLI
A:
[414-483]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
S
-----
L
E
-
D
Y
V
S
R
M
K
------------------
E
G
Q
--
E
K
--------------------
I
Y
Y
I
-----------------------
T
A
D
S
Y
A
A
A
K
S
S
P
-
H
L
-
E
L
-
L
R
K
K
G
-------
I
E
V
L
L
L
S
D
---
R
I
---------
D
E
------------------
W
M
-
M
N
Y
L
T
E
--------
F
-------------------
D
G
K
P
F
----------------
Q
S
V
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
42.56
24%
8
- C9 -
1FHL
-
GANA_ASPAC
A:
[198-266]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-----
T
G
--------------------
E
---
L
L
---
S
T
-----
D
F
D
--------
Y
F
G
---------
V
S
Y
Y
P
F
--------------
Y
S
--------
A
--
S
AT
L
A
S
L
K
-
T
S
L
A
N
L
Q
------------------
S
T
Y
--
D
K
--------------------
P
V
V
V
-----------------------
V
E
T
N
W
P
V
S
C
P
N
P
-
A
Y
-
A
F
P
S
D
L
S
S
-------
I
P
F
S
V
A
G
Q
---
Q
E
-----
F
L
--
E
K
------------------
L
A
-
A
V
V
E
A
T
T
D
------
G
-------------------
L
G
V
Y
Y
----------------
W
E
P
A
W
---------
I
-
G
N
A
G
L
G
S
S
C
A
----
D
N
L
M
V
--
D
Y
T
T
D
E
V
Y
E
S
I
-
E
------------------
T
L
G
E
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
42.14
15%
60
- C9 -
3UB0
-
?
B:
[46-78]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
A
V
L
E
K
L
-
L
------------------
A
L
I
A
F
F
L
S
K
H
N
T
C
D
L
S
D
--
L
---
I
E
S
Y
F
E
-
N
T
T
I
-
L
Q
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
41.49
26%
11
- C9 -
2IPC
-
SECA_THET8
A:
[694-800]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
-----
S
F
D
--------
D
D
L
---------
M
R
L
F
A
S
--------------
D
R
--------
V
I
A
M
-----
L
D
-
R
M
G
F
D
D
S
------------------
E
P
I
--
E
H
--------------------
P
M
-
V
-----------------------
T
R
S
I
E
R
A
Q
K
R
V
E
-
D
R
-
N
F
A
I
R
K
Q
L
-------
L
Q
F
D
D
V
L
S
---
R
Q
-----
R
E
-------------------------
V
I
Y
A
Q
R
R
L
------
I
-------------------
L
L
G
K
D
----------------
E
E
V
K
E
---------
A
A
I
G
M
V
E
E
T
V
A
S
----
L
A
E
N
F
--
L
N
P
E
V
H
P
E
D
W
D
-
L
------------------
E
G
L
K
A
T
L
L
D
T
A
P
Q
L
Q
D
F
--
P
---
F
A
E
L
R
A
-
L
K
A
E
-
E
A
V
E
---
R
L
--
V
E
A
--
A
L
----
K
A
Y
E
A
R
E
A
E
L
S
-
P
P
L
M
----
R
---------
A
V
E
R
F
V
I
L
N
V
V
D
N
A
-
W
-----
K
E
H
-
L
-----
H
---
N
L
D
-------------
V
-
L
R
Q
-----
G
I
F
L
R
G
Y
G
Q
K
D
---
P
F
----------
Q
E
Y
K
--
I
E
--
A
-
T
R
L
F
N
E
----------------------------
6
PsiBlast_PDB
41.15
29%
-26
- C9 -
3UC9
-
IRC6_YEAST
A:
[6-75]
----------------------------------------------------------------------------------
P
Q
N
K
I
L
V
L
S
D
----
H
P
--------------
H
N
F
L
K
---------
T
Q
F
L
Q
D
----
L
F
---------
H
C
S
--
S
T
G
I
----
S
I
--
V
K
---
D
Q
T
W
E
N
R
--
Y
Y
K
V
H
F
-------------------
D
L
Y
I
D
S
C
K
D
I
P
V
W
-------
V
E
E
F
I
-----------------------------------
T
P
-
E
C
E
P
-----
L
R
--------------------
N
---
V
M
---
A
G
-----
I
I
L
--------
I
T
D
---------
I
R
Q
T
K
P
--------------
Q
E
--------
L
--
L
-----
H
Q
-
F
M
I
A
A
H
R
------------------
N
T
F
--
V
V
--------------------
L
V
N
V
-----------------------
N
E
E
V
E
Q
D
E
I
D
E
L
-
N
E
-
I
W
S
N
A
F
T
N
-------
V
I
E
F
V
N
W
K
---
T
V
-----
N
H
--
N
D
------------------
Y
G
-
E
K
L
G
L
D
R
I
------
Q
-------------------
E
I
I
D
T
----------------
H
D
W
L
N
---------
C
-
E
V
Q
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
40.16
12%
14
- C9 -
2CR7
-
SIN3B_MOUSE
A:
[30-74]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
N
G
F
-
L
------------------
E
I
M
K
E
F
K
S
Q
--
S
I
D
T
P
G
--
V
I
R
R
V
S
Q
L
F
H
-
E
H
P
D
-
L
I
V
G
---
F
N
--
A
F
L
--
P
S
----
G
P
S
S
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
39.10
19%
44
- C9 -
2ZBK
-
TOP6B_SULSH
B:
[233-341]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
Y
G
V
D
R
E
-
E
I
-
K
I
L
I
N
N
L
K
-------
R
D
Y
T
I
K
E
F
---
L
V
-----
N
E
--
F
Q
------------------
S
I
-
G
D
T
T
A
D
K
I
------
L
-------------------
E
L
A
G
L
----------------
K
P
N
K
K
---------
V
-
K
N
L
T
E
E
E
I
T
R
----
L
V
E
T
F
--
K
K
D
E
-
D
F
R
S
P
S
-
A
------------------
D
S
L
S
V
I
G
E
D
L
I
E
L
G
L
K
K
--
I
---
F
N
P
D
F
A
-
A
S
I
T
-
R
K
P
K
---
A
Y
--
Q
G
H
--
P
F
----
I
V
E
A
G
V
A
F
G
G
S
-
I
P
V
G
----
E
---------
E
P
I
V
L
R
Y
A
N
K
I
P
L
I
-
Y
-----
D
E
K
-
S
-----
D
---
V
I
W
-------------
K
-
V
V
E
-----
E
L
D
W
K
R
Y
G
I
E
S
---
D
Q
----------
Y
Q
M
V
--
V
M
--
V
-
H
L
C
S
T
K
----------------------------
7
PsiBlast_PDB
38.03
27%
25
- C9 -
2GQ0
-
HTPG_ECOLI
A:
[414-485]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
--
S
-----
L
E
-
D
Y
V
S
R
M
K
------------------
E
G
Q
--
E
K
--------------------
I
Y
Y
I
-----------------------
T
A
D
S
Y
A
A
A
K
S
S
P
-
H
L
-
E
L
-
L
R
K
K
G
-------
I
E
V
L
L
L
S
D
---
R
I
---------
D
E
------------------
W
M
-
M
N
Y
L
T
E
--------
F
-------------------
D
G
K
P
F
----------------
Q
S
V
S
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
37.62
7%
119
* C9 *
3MHS
-
SUS1_YEAST
B:
[40-68]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
V
-
K
------------------
D
L
T
K
S
E
M
N
I
N
E
S
T
N
F
T
Q
--
I
---
L
S
T
V
E
P
-
K
A
L
E
-
M
V
S
D
---
S
T
--
R
E
T
--
V
L
----
K
Q
I
R
E
F
L
E
E
I
V
-
D
T
-----------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
31.77
18%
182
- C9 -
2AHM
-
R1AB_CVHSA (first)
A:
[51-78]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
E
A
F
E
K
M
-
V
------------------
S
L
L
S
V
L
L
S
M
Q
G
A
V
D
I
N
R
--
L
---
C
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------