@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1211: (2015-12-06 )
MTLNAKGESNQILVDKEVHSTNLLLDIDEKPELFQGLLLSFQHVFAMFGATILVPLILGMPVSVALFASGCGTLIYQVATKFKVPVYLGSSFAYITAMALAMKQMHGDISAAQTGILFVGLIYVVVATVIKFVGNSWVDKILPPIIIGPMIIVIGLGLANSAVTNAGFVAKGDWRKMLVAVVTFLIAAFINTKGKGFIKIIPFLFAIIGGYILSIILGLVDLSPVEKAAWFELPKFYLPFKTGLFHSYKLYFGPEMLAILPISIVTIAENIGDHTVLGQICGRNFLKKPGLNRLLIGDGLATAFSALIGGPAETTYGENTGVIGMTRIASVTVIRNAAFIAIAFSFFGKFTALISTIPSAVLGGMAILLYGVIASNGLKVLIENRVNFAEVRNLIIASSMLVLGLGGAVLDLGALTLSGTALSAIVGIILNLILPKESMKS

Atome Classification :

(20 SA) ----------------------------------------------------------------------------------.........10........20........30........40-----.......---.50........60-----.........70........80.....------....90........100---......--...110......-.120.......130-------.-.......140.......150...-----....160.......----170----.......180.------......190.......200.......210...--....220.......230.......240.......250-....-------.....------260.----......270....---------...280------------.....-....290.---......300....--....-.----310........320--...----.--.-..330.......340......--------.----.---350.......360.......370-........380.......390.......400.......410.......420.......430------.......440--------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------------MTLNAKGESNQILVDKEVHSTNLLLDIDEKPELFQGLLLSF-----QHVFAMF---GATILVPLILGM------PVSVALFASGCGTLIYQVAT-KFKVP------VYLGSSFAYITAMAL-----AMKQMH--GDISAAQTGILF-VGLIYVVVATVIK--------F-VGNSWVDKILPPIIIGPMIIVIG-----LGLANSAVTNAGFV----AKG----DWRKMLVAVVT------FLIAAFINTKGKGFIKIIPFLFAIIGGYILSI--ILGLVDLSPVEKAAWFELPKFYLPFKTGLFHSYKL---YFGP-------EMLAI------LPIS----IVTIAENIGDHTV---------LGQI--------------CGRNF-LKKPGLNR---LLIGDGL--ATAF--SALI-G----GP-AETTYGENTGV--IGM----T--R-IASVTVIRNAAFIA-IAFSFF--------G----K---FTALISTIPSAVLGGMAILLYG--VIASNGLKVLIENRVNFAEVRNLIIASSMLVLGLGGAVLDLGALTLSGTALSAIVGIILNL------ILPKESMKS---------------------
6 HHSearch 92.7939%-128 - C5 -3QE7 URAA_ECOLI A:[4-410] --------------------------------------------------------------------------------------------------------RAIGVSERPPLLQTIPLSL-----QHLFAMF---GATVLVPVLFHI------NPATVLLFNGIGTLLYLF-ICKGKIP------AYLGSSFAFISPVLL-----LL---P--LGYEVALGGFIM-CGVLFCLVSFI-V--------KKAGTGWLDVLFPPAAMGAIVAVIG-----LELAGVAAGMAGLLPAEGQTP----DSKTIIISITT------LAVTVLGSVLFRGFLAIIPILIGVLVGYALSF--AMGIVDTTPIINAHWFALPTLYT---------PRF---E-WF-------AILTI------LPAA----LVVIAEHVGHLVV---------TANI--------------VKKDL-LRDPGLHR---SMFANGL--STVI--SGFF-G----ST-PNTTYGENIGV--MAI----T--R-VYSTWVIGGAAIFA-ILLSCV--------G----K---LAAAIQMIPLPVMGGVSLLLYG--VIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSL------IFKLIS------------------------
16 Fugue 92.7039%-128 - C5 -3QE7 URAA_ECOLI A:[4-410] --------------------------------------------------------------------------------------------------------RAIGVSERPPLLQTIPLSL-----QHLFAMF---GATVLVPVLFHI------NPATVLLFNGIGTLLYLFIC-KGKIP------AYLGSSFAFISPVLL-----LLPL-----GYEVALGGFIM-CGVLFCLVSFIVK--------K-AGTGWLDVLFPPAAMGAIVAVIG-----LELAGVAAGMAGLL----PAEGQTPDSKTIIISITT------LAVTVLGSVLFRGFLAIIPILIGVLVGYALSF--AMGIVDTTPIINAHWFALPTLYTPR-------------FEWF-------AILTI------LPAA----LVVIAEHVGHLVV---------TANI--------------VKKDL-LRDPGLHR---SMFANGL--STVI--SGFF-G----ST-PNTTYGENIGV--MAI----T--R-VYSTWVIGGAAIFA-ILLSCV--------G----K---LAAAIQMIPLPVMGGVSLLLYG--VIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSL------IFKLIS------------------------
1 PsiBlast_PDB 91.4939%-128 - C5 -3QE7 URAA_ECOLI A:[4-405] --------------------------------------------------------------------------------------------------------RAIGVSERPPLLQTIPLSL-----QHLFAMF---GATVLVPVLFHIN-----PATVLLF-NGIGTLLYLFIC-KGKIP------AYLGSSFAFISPVLL-----LLPLGY-----EVALGGFIM-CGVLFCLVSFIVK--------K-AGTGWLDVLFPPAAMGAIVAVIG-----LELAGVAAGMAGLLP---AEGQTP-DSKTIIISITT------LAVTVLGSVLFRGFLAIIPILIGVLVGYALSF--AMGIVDTTPIINAHWFALPTLYTP-------RFEW---F----------AILTI------LPAA----LVVIAEHVGHLVV---------TANI--------------VKKDL-LRDPGLHR---SMFANGL--STVI--SGFF-G----ST-PNTTYGENIGV--MAI----T--R-VYSTWVIGGAAIFA-ILLSCV--------G----K---LAAAIQMIPLPVMGGVSLLLYG--VIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSL------IFKLIS------------------------
20 Fugue 62.2521% -99 * C6 *3EB8 - VIRA_SHIFL A:[53-399] -------------------------------------------------------------------------------------------------AEKHSEKKLMD-SFSPSLSQDKMDG------EFAHANI---D---------GI------SIRLCLN-KGICSVFYLDGD-K-------------------IQSTQL-----SSKEYN--NLLSSLPPKQFN-LGKVHTITAPVS------------GNFKTHKP------APEVIETA-----INCCTSIIPNDDY-----------------------------------FHVKDTDF-------------------------------NSVWHDIYRDIRASDS---NSTKI---YFNN------------------IEIP----LKLIADLINELGI---------NEFI--------------DSKKE-LQM--LSY---NQVNKII--NSNF--P------------------QQDLC--FQT----E--K-LLFTSLFQDPAFIS-ALTSAFWQSLHITSS----S---VEHIYAQIMSENIENRLNFMPEQRVINNCG-HIIKINAVRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPS--SEGLRNA------IPPESRQVSFAIISPD--------------
22 Fugue 59.7415%-120 - C4 -2J3L SYP_ENTFA A:[1-565] --------------------------MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPT---HEETFTELIRDE------INSYKRLP----LNLYQIQT-KYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSY--RDYEKAYSRIFERCGLEFRAIIGDGG--------A-MGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPK----KSH----ETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIAD--EEPVMVL--VRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYAD------LAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEGDPSPDGNGVL-AFTKGIEIGHIFKLGTRY--SDAM--GATV-L----DE-NGREKSVIMGCYGIGV----S--R-LLSAIVEQNADERG-INWPTG--------I----APFDLHVVQMNVKDEYQTKLSQEVEA--MMTEAGYEVLVDDR----NERAGVKFADADLIGCP-IRITVGKKAVDGVVEVKIKRTGEML------EVRKEELESTLSILM---------------
17 Fugue 49.7110%-130 - C5 -1Z6T APAF_HUMAN A:[1-586] MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGYKDLAALLHDGIPVVGITSYVRTVLCEGGVPQRPVVFVTRKKLV-----NAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGG-VHWVS------VGKQDKSGLLMKLQN-----LCTRLD--QDESFSQRLPLN-IEEAKDRLRILMLRKHPRSLLI-LDDVWDSWVLKAFDSQCQILLTTRD---KSVTDSVMGPKYVV----PV------ESSLGKEKGL------EILSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYDY------E-------ALDEA------MSIS----VEMLREDIKDYYT---------DLSI--------------LQKDVKVPTKVLCI---LWDMETEEVEDIL--QEFV-NKSLLFC-DRNGKSFRYYL--HDL----Q--V-DFLTEKNCSQLQDL-HKKIIT--------QFQRYH---QPHTLSPDQEDCMYWYNFLAYH--MASAKMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEY-RHILDEKDCAVSENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQ
23 Fugue 48.6314%-104 - C6 -3PND APBE_SALTY A:[13-329] ------------------------------------------------------------------------------------------AAQVLEGKTMGTLWRVSVVGIDAKRAAELQTKI-----QTQLDAD---DWLLSTY-------------------KNDSALMRFNHS-RSLAP------WPVSEAMADIVTSAL-----RIGAKT--DGA-------------------------------------------MDITVGPLVNLWG-----FGPDRQPLHIPT-------PA----QIDAAKAKTGL------QHLQVIDRAGHQFLQKDLPDLY----------------VDLSTVGEGYAADHLARLMEQEG--IARYLV---SVGG-------ALSSRGMNAQGQPWR----VAIQKPTDRENAV---------QAIVD-------------INGHG-ISTSGSYR---NYYELD--------------G----KR-VSHVIDPQTGR--PIE----H--N-LVSVTVIA-----------------------------------PTALEADGWDTGLMVLG------------TQKAQEVVRREGL---AVFMIMKEGEGFKTWMSPQFKTFLVSD--------------------------------------------
19 Fugue 41.4320% -98 - C5 -2NN4 - YQGQ_BACSU A:[1-62] --------------------------------------------------------------------------------------------------------------------------------------------------------------------LNTFYDVQQLLK-TFGHI------VYFGDRELEIEFMLD-----ELKELYMNHMIEKEQWARAA-AVLRKELEQT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 34.7428% -77 * C7 *2DPN - ? A:[186-296] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTLLFNLHTL---AWDP-------ELLEA------LGIP----AALLPEVRPSDGD---------FGET--------------LP-EL-LGAPVPIR---GVLGDQQ--AALFGQAALG-G----GE-GKCTYG--TGA--FLL----L--N-TGKRPVLSEKGLLATVAWSLG--------G----R---ATYALEGSLFVAGAAVGWLKEV--GLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAAL------EGVAFQVRD---------------------
21 Fugue 31.2535% 111 - C5 -1FH1 - NODF_RHILV A:[5-86] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTLEIISAINKLVLGLADVLWDLEQLNI-GDVVEAVRG-----------------------------------------
5 PsiBlast_CBE 29.6937% -39 - C5 -4R0C ? C:[284-336] ------------------------------------------------------------------------------------------------------------------------------------------GSVLGSPFIHGL------VVIVALIAGICGAVYGRVSG-QFR------------NSGAVITAMEV-----TMASMA--GYLVLMFFAAQF-VAWFNYSQLGLLL--------A-VKGAAWLGALTVPKVVLLLLFVV-----LTALINLMIGSASA----KWS----ILAPVFIPMLM------LLGISPEASQAAYRVGDSSTNIITPLMPYFVL--VLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVL---LGVW-------IGFGW------PLGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 28.8817%1276 - C3 -1JGN - B:[5-16] -----------------------------------------------------------------------------------NLNPNAKEFVPGVKYGNI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 28.6233% 886 - C7 -3UKW ? C:[8-22] ----------------------------------------------------------------------------------------------------RKRPLEWDEDEEPPRKRKRLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 28.1237% -30 - C5 -4R0C ? A:[284-336] ------------------------------------------------------------------------------------------------------------------------------------------GSVLGSPFIHGL------VVIVALIAGICGAVYGRVSG-QFR------------NSGAVITAMEV-----TMASMA--GYLVLMFFAAQF-VAWFNYSQLGLLL--------A-VKGAAWLGALTVPKVVLLLLFVV-----LTALINLMIGSASA----KWS----ILAPVFIPMLM------LLGISPEASQAAYRVGDSSTNIITPLMPYFVL--VLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVL---LGVW-------IGFGW------PLGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 Fugue 26.6030% 95 * C5 *1VF5 PETM_MASLA F:[1-33] --------------------------------------------------------------------------------------------------------------MTEEMLYAALLSF-----GLIFVGW---GLGVLLLKIQGA------E--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 HHSearch 26.2517% -29 - C5 -3QE7 URAA_ECOLI A:[44-145] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---VLLFNGI--GTLL--YLFICK----GKIPAYL-GSSFAF--ISPVLLLLPLGYEVALGGFIMCGVLF-CLVSFI--------V----KKAGTGWLDVLFPPAAMGAIVAVIGL--ELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYAL------SFAMGIVDT---------------------
13 HHSearch 25.2431% 851 - C7 -2QTV - D:[25-40] ------------------------------------------------------------------------------------------------------NDLPLKVKEKPSRAKAVSVA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 HHSearch 24.9236% 916 - C2 -2D11 - NHRF2_HUMAN E:[16-26] ----------------------------------------------------------------------------------MDWNRKREIFS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 HHSearch 24.0725% 817 - C5 -2D10 - NHRF1_HUMAN E:[16-27] ----------------------------------------------------------------------------------MDWSKKNELFSNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 18.5125% 273 - C5 -3MP7 - SECE_PYRFU B:[24-48] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNWATYKR---AAKITGL--GIIL--IGLI-G----ML-IRIVGILILGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------