@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1233: (2015-12-06 )
MKPICIIPARSGSKGLPDKNMLFLAGKPMIFHTIDAAIESGMFDKKDIFVSTDSELYREICLERGISVVMRKPELSTDQATSYDMLKDFLSDYEDNQEFVLLQVTSPLRKSWHIKEAMEYYSSHDVDNVVSFSEVEKHPGLFTTLSDKGYAIDMVGADKGYRRQDLQPLYYPNGAIFISNKETYLREKSFFTSRTYAYQMAKEFSLDVDTRDDFIHVIGHLFFDYAIREKENKVFYKEGYSRLFNREASKIILGDSKTISISLENYHNYSQGGVTLATMLENLPNFLTANVTEAFVSIGVNDLITGYSVEEIFSNFQKLYSLLAENKIKMRFTTIAYTLFRETVNNADIEKINQWLTEFCYQNQIPLLDINRFLSKDGNLNYHLTSDGLHFTQEANDLLQSQYQLFVDEVKTL

Atome Classification :

(20 SA) .........10......------..20........30........40........50.....---...60.---.......70........80.......--.90..--.--.....100........110.......120......---.130-....------.---..------..-140.------.-....-.150--..--.---....------.160.------..------.------....170.......180......-----------------.------------------190.......-..200.-.......210.......220.......230.......240.......250--.----........260--------...----------..------------....------------------------------270.......280..-.-....290--..--....--.300....----.---..310.......320...--.--...330...--....340.-------------......350.......360.-.-.....370-.-.......380......-----------.390.......400.......410.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKPICIIPARSGSKGLP------DKNMLFLAGKPMIFHTIDAAIESGMFDKKDIFVSTDSEL---YREICL---ERGISVVMRKPELSTDQATSYDMLKD--FLSDY--E--DNQEFV-LLQVTSPLRKSWHIKEAMEYYSSHDVDN---VV---SFSE------V---EK------HP-GLFT------T-LSDK-GYA---ID--M---VGAD------KGY-R------RQ------D------LQPLYYPNGAIFISNKETYLREK-----------------S------------------F--FTSRTYA-YQMA-K-EFSLDVDTRDDFIHVIGHLFFDYAIREKENKVFYKEGYSRLFNREASK----I----ILGDSKTIS----------ISL----------EN------------YHNY------------------------------SQGGVTLATMLENLP-N-FLTANVT--EA--FVSI--GVNDLITG----Y---SVEEIFSNFQKLYSLLAE--N--KIKMRFTTI--AYTLFRET-------------VNNADIEKINQWLTEFCYQN-Q-IPLLDI-N-R-FLSKDGNLNYHLTSDG-----------LHFTQEANDLLQSQYQLFVDEVKTL
1 PsiBlast_PDB 93.4137% -94 - C2 -1EYR NEUA_NEIME A:[6-216] ---IAVILARQNSKGLP------LKNLRKMNGISLLGHTINAAISSKCFDR--IIVSTDGGL---IAEEAK---NFGVEVVLRPAELASDTASSISGVIH--ALETI--G--SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGS---VV---SACP------M---EH------HPLKTLL------Q-INNG-EYA---PM--R---HLSD------LEQ-P------RQ------Q------LPQAFRPNGAIYINDTASLIANN-----------------C------------------F--FIAPTKL-YIMS-H-QDSIDIDTELDLQQAENILNH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 81.1923% -77 - C2 -3TQD KDSB_COXBU A:[9-256] -EFRVIIPARFD---LP------GKALVDIAGKPMIQHVYESAIKSG-AEE--VVIATDDKR---IRQVAE---DFGAVVCMTSSDHQSGTERIAEAAVA--LGF----E--DDEIIV-CLQGDEPLIPPDAIRKLAEDLDEHD--K---VA---SLCTPITEVDE---LF------NP-HSTK------V-VLNR-RNY---AL--Y---FSHA------PIP-W------GRDTFSDKENLQ---LNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLRI------------------LW-HGGRIHM-VVAK-S-KCPPGVDTEEDLERVRAYF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 79.4428% -92 - C2 -1QWJ NEUA_MOUSE A:[6-213] ----ALVLARGGSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVF--QSVWVSTDHDE---IENVAK---QFGAQVHRRSSETSKDSSTSLDAIVE--FLNYH--N--EVDIVG-NIQATSPCLHPTDLQKVAEMIREEGYDS---V-----FSV------V---RR------HQ-FRWS------E-IQKG-VRE---VT--EPLNLNPA------KRP-R------RQ------D------WDGELYENGSFYFAKR--HLIEM-----------------G------------------Y--LQGGKMAYYEMR-A-EHSVDIDVDIDWPIAEQRVLRFGYFGK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 77.7523% -91 - C2 -1QWJ NEUA_MOUSE A:[2-223] PHLAALVLARGGSKGIP------LKNIKRLAGVPLIGWVLRAALDAGVFQS--VWVSTDHDE---IENVAK---QFGAQVHRRSSETSKDSSTSLDAIVE--FLNYH--N--EVDIVG-NIQATSPCLHPTDLQKVAEMIREE-GYD---SV---FSVV------R---RH-------Q-FRWS------E---IQ-KGVREVTEPLN---LNP-------AKR-P------RR------QD-----WDGELYENGSFYFAKRHLIEM-G-----------------Y------------------L--QGGKMAY-YEMR-A-EHSVDIDVDIDWPIAEQRVLRFGYFGK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 74.2022% -80 - C2 -1VIC - KDSB_HAEIN A:[2-254] -SFTVIIPARFASSRLP------GKPLADIKGKPMIQHVFEKALQSG-ASR--VIIATDNEN---VADVAK---SFGAEVCMTSVNHNSGT----ERLAE--VVEKL--AIPDNEIIV-NIQGDEPLIPPVIVRQVADNLAKF-NVN---MASLAVKIH------D---AEEL----FN-PNAVK-----V-LTDK-DGY---VL--Y---FSRSVIPYDRDQF-M------NL------QDVQKVQLSDAYLRHIGIYAYRAGFIKQYV-----------------QWAPTQLENLEKLEQLRV-LY-NGERIH--VELA-KEVPAVGVDTAEDLEKVRAILAANGS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 69.3119% -69 - C2 -3K8D KDSB_ECOLI A:[18-263] -SFVVIIPARYASTRLP------GKPLVDINGKPMIVHVLERARESG-AER--IIVATDHED---VARAVE---AAGGEVCMTRADHQSGTERL----AE--VVEKC--AFSDDTVIV-NVQGDEPMIPATIIRQVADNLAQR-QVG---MA---TLAV------PIHNAE------EA-FNPNAVK---V-VLDA-EGY---AL--Y---FSRA------TIP-WDRDRFAEG------LET----VGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLE---QLRV---------------LW-YGEKIHV-AVAQ-E-VPGTGVDTPEDLERVRAEM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 67.9617% -84 - C2 -1H7E - KPSU5_ECOLX A:[1-240] SKAVIVIPARYGSSRLP------GKPLLDIVGKPMIQHVYERALQVAGVAE--VWVATDDPR---VEQAVQ---AFGGKAIMTRNDHESGTD----RLVE--VMHKV--E---ADIYI-NLQGDEPMIRPRDVETLLQGMRDD-PAL---PV---ATLCHAISAAE---AA------EP-STVK------V-VVNT-RQD---AL--Y---FSRS------PIP-Y------PRN-----A------EKARYLKHVGIYAYRRDVLQNYS-----------------QLPESMPEQAESLEQLRL-MN-AGINIRT-FEVA---ATGPGVDTPACLEKVRALMAQELAENA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 67.0920% -82 - C2 -2Y6P KDSB_AQUAE A:[2-232] -RRAVIIPARLGSTRLK------EKPLKNLLGKPLIRWVVEGLVKTG--ER--VILATDSER---VKEVVE---DL-CEVFLTPSDLPSGSD----RVLY--VVRDL-----DVDLII-NYQGDEPFVYEEDIKLIFRELEKG---E---RV---VTLA------R---KD------KE-AYERPEDVK-V-VLDR-EGY---AL--Y---FSRS------PIP-Y------FRK-----N------DTFYPLKHVGIYGFRKETLMEFG-----------------AMPPSKLEQIEGLEQLR--LLENGIKIKV-LIT--E-NYYHGVDTEEDLKIVEEKLK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 66.8418% -73 - C2 -3OAM KDSB_VIBCH A:[1-250] MSFTVVIPARYQSTRLP------GKPLADIGGKPMIQWVYEQAMQAG-ADR--VIIATDDER---VEQAVQ---AFGGVVCMTSPNHQSGTERLAEVVAK--MA--I--P--ADHIVV-NVQGDEPLIPPAIIRQVADNLAAC-SAP---MA---TLAV------E---IEDEAEVFNP-NAVK------V-ITDK-SGY---AL--Y---FSRA------TIPWD------RDNFA---KADKA--IVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ--LRVL---------------W--HGEKIHV-AVAL-E-APPAGVDTPEDLEVVRRIVAERAQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 66.3417% -93 * C2 *3P94 ? A:[20-203] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K----VPSNVVFMG----------NSI----------TD------------GWWPADSTFFIRNNFVDR----------------GISGQTTSEMLVRFRQD-VINLKPK--AV--VILA--GINDIAHN----NGVIALENVFGNLVSMAELAKA--N--HIKVIFCSV--LPAYDFPWRPGM---------QPADKVIQLNKWIKEYADKN-G-LTYVDY-HSA-MKDERNGLPANLSKDG-----------VHPTLEGYKIMEKIVLEAIHKTVK-
30 HHSearch 63.9520% -91 - C2 -2HSJ ? A:[19-214] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIQTKYRHLNHIS----V----VEPNILFIG----------DSI----------VE------------YYPLQELFGTSKTIVNR-----------------GIRGYQTGLLLENLDAH-LYGGAVD--KI--FLLI--GTNDIGKD----V---PVNEALNNLEAIIQSVAR--DYPLTEIKLLSI--LPVNEREEYQQAVYI------RSNEKIQNWNQAYQELASAYMQ-VEFVPV-FDC-LTDQAGQLKKEYTTDG-----------LHLSIAGYQALSKSLKDYLY-----
56 Fugue 63.9115% -66 - C2 -1H7E - KPSU5_ECOLX A:[1-245] SKAVIVIPARYGSSRLP------GKPLLDIVGKPMIQHVYERALQVAGVA--EVWVATDDPR---VEQAVQ---AFGGKAIMTRNDHESGTDRLVEVMHK--V---------EADIYI-NLQGDEPMIRPRDVETLLQGMRDDPALP---VA---TLCH------A---IS------AA-EAAEPSTVKVV-VNTR-QDA---LY--F---SRSP------IPY-P------RN------A------EKARYLKHVGIYAYRRDVLQNYS-----------------Q------------------L--PESMPEQ-AESL-E-Q--LRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQELAENA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 61.6017% -90 - C2 -3MIL IAH1_YEAST A:[3-211] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEKFLLFG----------DSI----------TE------------FAFNTRPIEDGKDQYALGAALVNEYTRKMDILQRGFKGYTSRWALKILP-E-ILKHESN--IVMATIFL--GANDACSAGPQSV---PLPEFIDNIRQMVSLMKS--Y--HIRPIIIGP--GLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEE-K-VPFVAL-NKA-FQQEGGDAWQQLLTDG-----------LHFSGKGYKIFHDELLKVIETFYPQ
6 PsiBlast_PDB 61.5526%-106 - C2 -1VIC - KDSB_HAEIN A:[5-153] ----VIIPARFASSRLP------GKPLADIKGKPMIQHVFEKALQSG---ASRVIIATDNEN---VADVAK---SFGAEVCM----TSVNHNSGTERLAE--VVEKLAIP--DNEIIV-NIQGDEPLIPPVIVRQVADNLAKFNVNMASLAV---KIHD------A---EELF----NP-NAVK------V-LTDKDGYV---LY--F---SRSV------IPY-D------RD------Q------FMNLQDVQKVQLSDAYLRHIGIY-----------------A------------------Y--RAGFIKQ-YVQW-A-PTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAIL----A----ANGS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 60.6916% -74 - C2 -1LVW ? A:[2-243] AHMKGIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLAG-IRD--ILIISTPRDLPLYRDLLGDGSQFGVRFSYRVQEEPRGIA---DAFIV--GKDFI--G---DSKVA-LVLGDNVFYGH-RFSEILRRAASL-EDG---AV---IFGY------Y---VR------DP-RPFG------VVEFDS-EGR---VI--S---IEEK------PS------------------------RPKSNYVVPGLYFYDNQVVEIAR-----------------RIEPSDRGELEITSVNEEYL--RMGKLRV-ELMGRG-MAWLDTGTHDGLLEASSFIETIQKRQGFYIACLEEIAYNNGWITREDV----L----EMAEKLEKT----------DYG----------KY------------LRDL------------------------------AEGNFHG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 60.2514% -86 - C2 -3HP4 - ? A:[2-183] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNTILILG----------D-L----------SA------------AYGLQQEEGWVKLLQDKYDAEQSDIVLINA----SISGETSGGALRRLD-ALLEQYEPT--HV--LIEL--GANDGLRG----F---PVKKMQTNLTALVKKSQA--A--NAMTALMEI--YIPPN----------------YGPRYSKMFTSSFTQISEDT-N-AHLMNF-FML-DIAGK---SDLMQNDS-----------LHPNKKAQPLIRDEMYDSIKKWLNN
49 Fugue 60.1315% -70 - C2 -1FXW PA1B3_BOVIN A:[5-215] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVV----FIGDSLVQLMHQCEIWRELFSP----------LH------------ALNF------------------------------GIGGDSTQHVLWRLE-N-GELEHIRPKIV--VVWV--GTNN--HG----H---TAEQVTGGIKAIVQLVNE--RQPQARVVVLGL--LPRGQHPN-------------PLREKNRRVNELVRAALAGH-PRAHFLDA-D-PGFVHSDGTISHHDMYDY-----------LHLSRLGYTPVCRALHSLLLRL---
50 Fugue 60.0813% -86 - C2 -5A4A ? A:[1-208] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHTSGTYNDSLLTINSDYDAY----LLDFPLMGDDFMLY----------LAR----------MELKCRFRRHERVLQSGL------------------------------CVSGLTINGARNRLK-R-VQLPEGT--QI--IVNI--GSVDIMRG----K---PLVQIEHDFRLLIKEMHN--M--RLVPILTNLAPLGNYCHDK-------------VLCDKIYRFNKFIRSEC--C-H-LKVIDIHS-C-LINERGVVRFDCFQASPRQVTGSKEPYLFWNKIGRQRVLQVIETSLEY----
51 Fugue 59.9518% -70 - C2 -1FXW - PA1B2_BOVIN F:[6-217] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVL----FVGDSMVQL----------MQQYEIWRELFSPLH------------ALNF------------------------------GIGGDTTRHVLWRLK-N-GELENIK--PK--VIVVWVGTNNH--E----N---TAEEVAGGIEAIVQLINTRQP--QAKIIVLGL--LPRGEKPN-------------PLRQKNAKVNQLLKVSLPKL-ANVQLLDT-D-GGFVHSDGAISCHDMFDF-----------LHLTGGGYAKICKPLHELIMQLL--
5 PsiBlast_PDB 59.5830%-108 - C2 -3TQD KDSB_COXBU A:[13-135] -----IIPARFD---LP------GKALVDIAGKPMIQHVYESAIKSGA---EEVVIATDDKR---IRQVAE---DFGAVVCM----TSSDHQSGTERIAEAAVALGF--E--DDEIIV-CLQGDEPLIPPDAIRKLAEDLDEHD--K---VA---SLCT------P---IT------EV-DELF------N-PHST-KVV---LN--R---RNYA------LYF-S------HA------P------IPWGRDTFSDKENLQLNGSHYRH-----------------V------------------G--IYAYRVG-FLEE-Y-LSWDACPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERV----R----AYF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------