@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1245: (2015-12-06 )
MTRLEIVDSKLRQAKKTEEYFNAIRTNIQFSGKENKILAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSGTFKATGTIKGLTNYLSGNADLGDIICETNVPRLMVVPSGKVPPNPTALLQNAYFNKMIEAIKNIFDYIIIDTPPIGLVVDAAIIANACDGFILVTQAGRIKRNYVEKAKEQMEQSGSKFLGIILNKVNESVATYGDYGDYGNYGKRDRKRK

Atome Classification :

(20 SA) ------------.........10.......--------------------.20........30--..-.-...--..40........50........60........70........80---.....----.-..------90........100......-.110.......-------120.......130-----.........140.-......150...-....160.......170.......180.......190....------.--------.--.------200....----------..--.210.......220.........230----------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------MTRLEIVDSKLRQAKKTE--------------------EYFNAIRTNIQFS--GK-E-NKI--LAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSG---TFKAT----G-TI------KGLTNYLSGNADLGDIICE-TNVPRLMVVPS-------GKVPPNPTALL-------QNAYFNKMIEAIK-NIFDYIIIDTPP-IGLVVDAAIIANACDGFILVTQAGRIKRNYVEKAKEQMEQS------G--------S--K------FLGIILN----------KV--NESVATYGDYGD--YGNYGKRDRKRK----------------------------------------
1 PsiBlast_PDB 94.0838%-107 - C2 -4JLV ? A:[64-254] --------------------------------------------------EKFRGIRSNIMFSK--G-E-VKR--LLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNY---IFNEQ----N-N-------NGLSSLIIGRTTMSEAITS-TEIENLDLLTA-------GPVPPNPSELI-------GSERFKELVDLFN-KRYDIIIVDTPP-VNTVTDAQLYARAIKDSLLVIDNEKNDKNEVKKAKALMEKA------G--------S--N------ILGVILNKT------------------------------------------------------------------------------
23 PsiBlast_CBE 93.0033%-105 - C2 -3CIO D:[86-282] --------------------------------------------------EAVRALRTSLHFAMMET-E-NNI--LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHN---LFTVS----N-E-------HGLSEYLAGKDELNKVIQH-FGKGGFDVITR-------GQVPPNPSELL-------MRDRMRQLLEWAN-DHYDLVIVDTPP-MLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQA------G--------V--N------IKGAILN----------GV--IKRASTAYSYGY------------------------------------------------------
6 PsiBlast_PDB 91.3133%-102 - C2 -3CIO ETK_ECOLI A:[86-282] --------------------------------------------------EAVRALRTSLHFAMMET-E-NNI--LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHN---LFTVS----N-E-------HGLSEYLAGKDELNKVIQH-FGKGGFDVITR-------GQVPPNPSELL-------MRDRMRQLLEWAN-DHYDLVIVDTPP-MLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQA------G--------V--N------IKGAILN----------GV--IKRASTAYSYGY--NY--------------------------------------------------
88 HHSearch 91.0933% -96 - C2 -3CIO ETK_ECOLI A:[80-284] ------------------------PADSAV--------------------EAVRALRTSLHFA--MMETENNI--LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHN---LFTVS------NE------HGLSEYLAGKDELNKVIQH-FGKGGFDVITR-------GQVPPNPSELL-------MRDRMRQLLEWAN-DHYDLVIVDTPP-MLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQA------G--------V--N------IKGAILN----------GV--IKRASTAYSYGY--NY--------------------------------------------------
77 Fugue 90.4031% -96 - C2 -3CIO ETK_ECOLI A:[25-290] GVEAPEQLEEHGISVYATIPMSEWLDKRQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMET-E-NNI--LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHN---LFTVS----N-E-------HGLSEYLAGKDELNKVIQH-FGKGGFDVITR-------GQVPPNPSELL-------MRDRMRQLLEWAN-DHYDLVIVDTPP-MLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQA------G--------V--N------IKGAILN----------GV--IKRASTAYSYGY--NY--------------------------------------------------
3 PsiBlast_PDB 89.5633%-114 - C2 -4JMP - ? A:[62-254] --------------------------------------------------EKFRGIRSNIMFA---P-D-SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHY---IFNLP----N-N-------EGLSSLLLNWSTYQDSIIS-TEIEDLDVLTS-------GPIPPNPSELI-------TSRAFANLYDTLL-MNYNFVIIDTPP-VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEAT------G--------A--K------LLGVVLN----------RMPK------------------------------------------------------------------
2 PsiBlast_PDB 89.0633%-111 - C2 -3BFV CAP8A_STAAU A:[64-256] --------------------------------------------------EKFRGIRSNIMFA--NP-D-SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHY---IFNLP----N-N-------EGLSSLLLNWSTYQDSIIS-TEIEDLDVLTS-------GPIPPNPSELI-------TSRAFANLYDTLL-MNYNFVIIDTPP-VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEAT------G--------A--K------LLGVVLN----------RMPK------------------------------------------------------------------
21 PsiBlast_CBE 88.8033%-111 - C2 -3BFV CAP8A_STAAU B:[64-256] --------------------------------------------------EKFRGIRSNIMFA--NP-D-SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHY---IFNLP----N-N-------EGLSSLLLNWSTYQDSIIS-TEIEDLDVLTS-------GPIPPNPSELI-------TSRAFANLYDTLL-MNYNFVIIDTPP-VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEAT------G--------A--K------LLGVVLN----------RMPK------------------------------------------------------------------
4 PsiBlast_PDB 88.5833%-113 - C2 -2VED ? A:[64-267] --------------------------------------------------EKFRGIRSNIMFA--NP-D-SAVQSIVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHY---IFNLP----N-N-------EGLSSLLLNWSTYQDSIIS-TEIEDLDVLTS-------GPIPPNPSELI-------TSRAFANLYDTLL-MNYNFVIIDTPP-VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEAT------G--------A--K------LLGVVLN----------RMPKDKSASYYAYYG-------------------------------------------------------
5 PsiBlast_PDB 88.0830%-100 - C2 -3LA6 WZC_ECOLI A:[74-285] --------------------------------------------------EAIRSLRTSLHFAMMQA-Q-NNV--LMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRKG-YTH---ELLGT----N-NV------NGLSEILIGQGDITTAAKP-TSIAKFDLIPR-------GQVPPNPSELL-------MSERFAELVNWAS-KNYDLVLIDTPP-ILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQN------G--------I--P------VKGVILN----------SI--FRRASAYQDYGY--YEYEYKSDA-------------------------------------------
22 PsiBlast_CBE 87.4433%-109 - C2 -2VED ? B:[64-267] --------------------------------------------------EKFRGIRSNIMFA--NP-D-SAVQSIVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHY---IFNLP----N-N-------EGLSSLLLNWSTYQDSIIS-TEIEDLDVLTS-------GPIPPNPSELI-------TSRAFANLYDTLL-MNYNFVIIDTPP-VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEAT------G--------A--K------LLGVVLN----------RMPKDKSASYYAYYGT--D---------------------------------------------------
87 HHSearch 85.4828%-105 - C2 -3LA6 WZC_ECOLI A:[67-271] -----------------------NPTDLAI--------------------EAIRSLRTSLHFA--MMQAQNNV--LMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMRKGYTHE---LLGTN------NV------NGLSEILIGQGDITTAAKP-TSIAKFDLIPR-------GQVPPNPSELL-------MSERFAELVNWAS-KNYDLVLIDTPP-ILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQN------G--------I--P------VKGVILN----------SI--FRRASAYQDYGY--YEYEYKSDA-------------------------------------------
8 PsiBlast_PDB 73.0727% -94 - C2 -1G3Q ? A:[3-176] -----------------------------------------------------------------------RI--ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSL---VLGVD----D-PD------VTLHDVLAGEANVEDAIYM-TQFDNVYVLP--------GAVDWEHVLKA-------DPRKLPEVIKSLK-DKFDFILIDC-P-AGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKA------G--------L--A------ILGFVLN----------RY--GRSDRDIPPEAA--EDVMEVPLLAVI----------------------------------------
82 Fugue 72.8223% -96 - C2 -3K9G ? A:[26-267] --------------------------------------------------------------------K-PKI--ITIASIKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSY---FYEKI----E-KLGINFTKFNIYEILKENVDIDSTIIN-VD-NNLDLIPS-------YLTLHNFSEDKIEH----KDFLLKTSLGTLY-YKYDYIVIDTNPSLDVTLKNAL--LCSDYVIIPMTAEKWAVESLDLFNFFVRKL------N--------LFLP------IFLIITRFKKNRTHK--TL--FEILKTKDRFLG--TISENKDYIKEYENILEIFLKKI-----------------------------
89 HHSearch 72.6925% -92 - C2 -1G3Q ? A:[2-176] ----------------------------------------------------------------------GRI--ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSL---VLGVD----D-PD------VTLHDVLAGEANVEDAIYM-TQFDNVYVLPG-------AVDWEHVL-KA-------DPRKLPEVIKSLK-DKFDFILIDCPA-GLQLD-AMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKA------G--------L--A------ILGFVLN----------RY--GRSDRDIPPEAA--EDVMEVPLLAVI----------------------------------------
9 PsiBlast_PDB 72.0327% -93 - C2 -1G3R ? A:[3-176] -----------------------------------------------------------------------RI--ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSL---VLGVD----D-PD------VTLHDVLAGEANVEDAIYM-TQFDNVYVLP--------GAVDWEHVLKA-------DPRKLPEVIKSLK-DKFDFILIDC-P-AGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKA------G--------L--A------ILGFVLN----------RY--GRSDRDIPPEAA--EDVMEVPLLAVI----------------------------------------
7 PsiBlast_PDB 70.8227% -87 - C2 -1ION ? A:[2-176] ----------------------------------------------------------------------TRI--ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSL---VLGVD----D-VN------ITLHDVLAGDAKLEDAIYM-TQFENVYILP--------GAVDWEHVIKA-------DPRKLPEVIKSLK-GKYDFILIDCPA--GLQLRAMSAMLSGEEAILVTNPEISCLTDTMKVGMVLKKA------G--------L--A------ILGFILN----------RY--GRSERDIPPEAA--QDVMDVPLLAVI----------------------------------------
94 HHSearch 69.7720% -91 * C2 *3Q9L MIND_ECOLI A:[2-188] ----------------------------------------------------------------------ARI--IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDL---IMGCE----RRVV------YDFVNVIQGDATLNQALIKDKRTENLYILPA-------SQTRDK--DAL-------TREGVAKVLDDLKAMDFEFIVCDSPA-GIE-TGALMALYFADEAIITTNPEVSSVRDSDRILGILASK------SRRAENGEEP--I------KEHLLLT----------RY--NPGRVSRGDMLS--MEDVLEILRIKL----------------------------------------
95 HHSearch 67.7721%-100 - C2 -2OZE ? A:[36-226] ----------------------------------------------------------------------AIV--ILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT-LTK---DLAKTFKVEL-PR------VNFYEGLKNG-NLASSIVH--LTDNLDLIPG-------TFDLMLLPKLTRSWTFENESRLLATLLAPLK-SDYDLIIIDTVP-TPS-VYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLIDLQEQFNPG--------L--D------MIGFVPY----------LV--DTDSATIKSNLE--ELYKQHKEDNLV----------------------------------------
81 Fugue 66.7621% -95 - C2 -2OZE ? A:[15-298] ------------------------MEKEEL--------------------KILEELRRILSNK--N--E-AIV--ILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVE----L-PR------VNFYEGLKNGNLASSIVHL-T--DNLDLIPGTFDLMLLPKLTRSWTFEN-------ESRLLATLLAPLK-SDYDLIIIDTVPTPSVYTNNAIVA--SDYVMIPLQAEEESTNNIQNYISYLIDL------Q--------E--QFNPGLDMIGFVPYLVDTDSATIKSN--LEELYKQHKEDNLVFQNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYKNVFFEMLERIIQLENEKE