@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1372: (2015-12-07 )
MKRITANQYQTSERYYKLPKLLFESDRYKDMKLEVKVAYAVLKDRLELSLSKGWIDGDGAIYLIYSNSKLMALLGCSKSKLLSIKKMLKEFGLIDEVQQSSSEKGRLANKIYLGELEHDTPPVLNSDGGGVQKILEESQNQPGPVLNSAPSETEESETYISETEKSDLIAEDEEENEREEQEKEVLHRKVDKATLYDKDYIWNLVYSQLRKEKLSQTSADFAMRHFEERYHYALDHMRFAQTSEMVAEYVFNGILAEWNKGIRKQEMGKSS

Atome Classification :

(20 SA) ---------------------.........10-----.....------...20---........------------.30........40........50.-...----..-------..60........70-----...-----------.....80........90........100.-----.....---------.110...--...-----.------120..---.....130.......140------------------.......150.......160----.......170--..--------.....180.---------------...---------...190.......200.-------......-----------------210.......220-------.....----...230......---.240.......250.......260.......270-------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------MKRITANQYQT-----SERYY------KLPK----LLFESDRY------------KDMKLEVKVAYAVLKDRLELSLSK-GWI----DG-------DGAIYLIYSNSKLM-----ALL-----------GCSKSKLLSIKKMLKEFGLIDEVQQSSSE-----KGRLA---------NKIYLGE--LEH-----D------TPPVL---NSDGGGVQKILEESQNQP------------------GPVLNSAPSETEESETYISE----TEKSDLIAED--EE--------ENEREEQEK---------------EVL---------HRKVDKATLYDKDYIWN-------LVYSQL-----------------RKEKLSQTSADF--------AMRHF----EERYHYALDHMR---FAQTSEMVAEYVFNGILAEWNKGIRKQEMGKSS--------------------------------------------
50 Fugue 91.1038%-105 - C2 -4PQL ? A:[1-131] ---------------------QNQYFTVQENY-----KERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILYLMKPIVTERDIYKIEK--EEN-----D------VEP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 69.0549%-133 - C2 -4PT7 ? A:[3-77] ---------------------------NQYFTVQENYKERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILY---------LMKPIVT--ERD-----I------YKIEK---EENDVEP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 68.9249%-132 - C2 -4PQL ? A:[2-76] ---------------------------NQYFTVQENYKERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILY---------LMKPIVT--ERD-----I------YKIEK---EENDVEP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 68.2049%-133 - C2 -4PT7 ? D:[3-77] ---------------------------NQYFTVQENYKERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILY---------LMKPIVT--ERD-----I------YKIEK---EENDVEPY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55 Fugue 67.9718% 11 - C2 -4Q4D VIP2_HUMAN A:[7-323] QIVVGICSMAKKSKSKPMKEILERISLFKYIT-----VVVF-------EEEV----ILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFV--------I----ND-------LNMQYLIQDRREVY-----SIL-----------QAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVF---------QKPFVEKPVSAE-----D------HNVYIYYPTSAGGGSQRLFRKIG--S------------------RSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPD--------YAHAEARKS---------------PAL---------DGKVERDS-EGKEVRYP-------VILNAR-----------------EKLIAWKVCLAFKQTVCGFDLLRAN----GQSYVCDVNGFS---FVKNSMKYYDDCAKILGNIVMRELAPQFHIPWS--------------------------------------------
24 PsiBlast_CBE 67.5249%-131 - C2 -4PT7 ? B:[3-77] ---------------------------NQYFTVQENYKERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILY---------LMKPIVT--ERD-----I------YKIEK---EENDVEPY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 67.3849%-135 - C2 -4PQL ? B:[2-76] ---------------------------NQYFTVQENYKERFY------QIPK----VFFTSENY------------KNLTNDMKIAYAILRDRLNLSIKN-SWV----DE-------DGNIYFVYSNEKLM-----EIL-----------NCKKEKLTKIKKGLENDGLLIQKRRGLNK-----PNILY---------LMKPIVT--ERD-----I------YKIEK---EENDVEP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58 Fugue 62.0418% 2 - C1 -3FHC - NU214_HUMAN A:[9-405] -------------------IPEREMKDFQFRA-----LKKVRIFDSPEELPKERSSLLAVSNKY------------G-------LVFAGGASGLQIFPTK-NLLIQNKPG-------DDPNKIVDKVQGLL-----VPM--------------KFPIHHLALSCD--NLTLSACMMSSE-----YGSII---------AFFDVRT--FSN-----EAQKRPFAYHKL---LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW----SPKGKQLAVG--KQNGTVV---QYLPTLQEK---------------KVIPCPPFYESDHPVRVLDVLWIGTYVFA-------IVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNF--------MEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLMLLSTDGVLCPFYMIN
7 PsiBlast_PDB 54.6130% 59 - C2 -1K83 - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFS------QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
8 PsiBlast_PDB 53.1530% 48 - C2 -1NIK - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
6 PsiBlast_PDB 52.8230% 48 - C2 -1I6H - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
12 PsiBlast_PDB 52.6730% 52 - C2 -1SFO - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
11 PsiBlast_PDB 52.2830% 48 - C2 -1R5U - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
13 PsiBlast_PDB 52.1630% 48 - C2 -1R9S - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
53 Fugue 51.7812% 16 * C3 *1O89 - ACUI_ECOLI A:[1-323] ---------------------LQALLLEQQTL-----ASVQT------LDES----RLPEGD----------------VTVDVHWSSLNYKDALAITGKG-KII----RNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIG-----TAGFT---------AMLCVMA--LEDAGVRPQ------DGEIVVT-GASGGVGSTAVALLHKLG------------------YQVVAVSGR--ESTHEYLKS----LGASRVLPRD--EF--------AESRPLEKQVWAGAIDTVGDKVLAKVL---------AQMNYGGCVAACGLAGGFTLPTTVMPFILR-----------------NVRLQGVDSVMT--------PPERR----AQAWQRLVADLP---ESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKV-----------------------------------------
14 PsiBlast_PDB 50.9230% 54 - C2 -1R9T - RPB1_YEAST A:[1145-1219] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTIASEIYYDP----DPRSTVIPED--EEIIQLHFSL-----QQSP---------------WLL---------RLELDRAAMNDKD-----------LTMGQV------------------GERIKQTFKND--------LFVIW----SEDNDEKLIIRC---RVVAEEDHMLKKIENTMLENITLRGVENIERVV--------------------------------------------
44 HHSearch 50.2819% -75 - C2 -2DK5 - A:[16-73] ----------------------------------------------------------------------------KGSDNQEKLVYQIIEDA----------------G-------NKG----IWSRDVR-----YKS-----------NLPLTEINKILKNLESKKLIKAVKSVAAS-----KKKVY---------MLYNLSG--PSS-----G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 HHSearch 49.5516%-129 - C2 -3EDP ? A:[10-68] -------------------------------------------------------------------------------------LFEVIASKIKDSINRDEYK----T---------G----MPNETALQ-----EIY-----------SSSRTTIRRAVDLLVEEGLVVRKNGVGLY-----VQPKL---------TAQNILE--MTG-----V------MKNLK---KDIKDFYIRKAGKFYAEI------------------FGMKENELVYSIKFVQKSEH----GATLDRLILP--LG--------LYPDLQAKD---------------FQI---------INIIELVNSGKYKLFEL-------EQELQL-----------------ILAGNEQIKNMH--------LNEND----PVFKLSSVFYAE---NDMPIAIQYHYEDAESTKYVVDFN-----------------------------------------------------
31 HHSearch 49.0616% -65 - C2 -2B0L - CODY_BACSU A:[175-236] --------------------------------------------------------------AI------------SSLSYSELEAIEHIFEEL---------D----GN-------EG----LLVASKIA-----DRV-----------GITRSVIVNALRKLESAGVIESRSLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 48.1514% -49 - C2 -2V79 DNAD_BACSU A:[1-86] ---------------------MKKQQFIDM-Q-----EQGTS------TIPN----LLLTHYKQ------------LGLNETELILLLKIKMHL---------E----KG-------SY----FPTPNQLQ-----EGM-----------SISVEECTNRLRMFIQKGFLFIEECEDQN-----GIKFE---------KYSLQPL--WGK-----L------YEYIQ---LAQN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------