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(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1394: (2015-12-07 )
MVKVQTGGKLYIAGEYAILYPGQVAILKNIPIYMTALATFADNYSLYSDMFNYTASLQPDKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSISKEMINIVKSTITQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKGLDIVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS

Atome Classification :

(20 SA) -------------------.........10.----.------......20..------.---...---..30-.-...-----....40..----....--..50-...--.-------------.-------.------.---..-60....-----------------------.....70.-----------........80........90....-.----...100.......110.......120..---------------.....130.......140.-.-......150.....---.-----.---160.-.....-.-----170--------.......180.......-190.......-200.......210--..------------..-.--------...220------.--..---------------.--------.--------------------.-------------..230-.----.----..--.....240.-------......250.......260..--...-------..270----.-----........280.---.-.-.-.--..290.......300---------------.......---310.......320.......330----------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------MVKVQTGGKLYI----A------GEYAILYPGQ------V---AIL---KNIP-I-YMT-----ALATFADN----YSLY--SDM--FNY--T-------------A-------S------L---QP-D-KQYS-----------------------LIQETI-L-----------LMEEWLINFGKNIKPIHLEITGKL-E----RYGLKFGIGSSGSVVVLTIKAMAALYEI---------------EMPSDLLFKLSAYVLLK-R-G-DNGSMGDIACIAYE---H-----L---ISYS-AFDRR-A-----VSK--------MIETKPLEQVLEAEWGY-RITKIQASLE-MDFLVGWTMQP-S--IS------------KE-M--------INIVK-------S--TI---------------T--------Q--------------------R-------------FLD---D----T----NY--QVVQLLSAF-------KEGDKEAIKRCLEEISLLLFN--LHP-------SIY------T-----DKLQKLKEASKG---L-D-I-V--TKSSGSGGGDCGIAI---------------SFNKNDN---QTLIKRWESAGIELLSKETLS------------
1 PsiBlast_PDB 99.9852%-116 - C4 -3GON ? A:[1-329] -------------------MIAVKTCGKLYW----A------GEYAILEPGQ------L---ALI---KDIP-I-YMR-----AEIAFSDS----YRIY--SDM--FDF--A-------------V-------D------L---RP-N-PDYS-----------------------LIQETI-A-----------LMGDFLAVRGQNLRPFSLAIYGKM-E----REGKKFGLGSSGSVVVLVVKALLALYNL---------------SVDQNLLFKLTSAVLLK-R-G-DNGSMGDLACIAAE---D-----L---VLYQ-SFDRQ-K-----VAA--------WLEEENLATVLERDWGF-SISQVKPTLE-CDFLVGWTKEV-A--VS------------SH-M--------VQQIK-------Q--NI---------------N--------Q--------------------N-------------FLT---S----S----KE--TVVSLVEAL-------EQGKSEKIIEQVEVASKLLEG--LST-------DIY------T-----PLLRQLKEASQD---L-Q-A-V--AKSSGAGGGDCGIAL---------------SFDAQST---KTLKNRWADLGIELLYQERI-------------
17 HHSearch 97.0952%-114 - C4 -3GON ? A:[1-327] -------------------MIAVKTCGKLYW----A------GEYA-ILEPG------QL--ALI---KDIP-I-YMR-----AEIAFSDS----YRIY--SDM--FDF--A-------------V-------D------L---RP-N-PDYS-----------------------LIQETI-A-----------LMGDFLAVRGQNLRPFSLAIYGKM-E----REGKKFGLGSSGSVVVLVVKALLALYNL---------------SVDQNLLFKLTSAVLLK-R-G-DNGSMGDLACIAAE---D-----L---VLYQ-SFDRQ-KVAAWLEEE--------NLAT-----VLERDWGF-SISQVKPTLE-CDFLVGWTKEV-A--VS------------SH-M--------VQQIK-------Q--NI---------------N--------Q--------------------N-------------FLT---S----S----KE--TVVSLVEAL-------EQGKSEKIIEQVEVASKLLEG--LST-------DIY------T-----PLLRQLKEASQD---L-Q-A-V--AKSSGAGGGDCGIAL---------------SFDAQST---KTLKNRWADLGIELLYQERI-------------
2 PsiBlast_PDB 81.1430% -97 - C4 -3K17 ? A:[7-351] --------------------LQVKIPGKLYV----A------GEYAVVESGH------T---AIL---TAVN-R-YIT-----LTLEDSER----NELW--IPH--YEN--P-------------V-------SWPIGGEL---KP-DGEHWT-----------------------FTAEAI-N-----------IATTFLKSEGIELTPVKMVIETELID----QSGAKYGLGSSAAATVAVINALMTKFYP---------------EISMLKKFKLAALSHLV-V-Q-GNGSCGDIASCMYG---G-----W---IAYT-TFDQE-W-----VKH--------RLAYKSLEWFMKEPWPM-LQIETLEEPV-PTFSVGWTGTP-V--ST------------GK-L--------VSQIHAFKQED-S--KN---------------Y--------Q--------------------H-------------FLT---R----N----NE--IMKQIIQAF-------HTKDEELLYSSIKENRRILQE--LGTKAGV---NIE------T-----SLLKELADSAEN---M-G-G-A--GKSSGSGGGDCGIAF---------------SKTKELA---EKLVNEWEKLGIKHLPFHTGR------------
18 HHSearch 80.7829%-101 - C4 -3K17 ? A:[6-350] -------------------KLQVKIPGKLYV----A------GEYA-VVESG------HT--AIL---TAVN-R-YIT-----LTLEDSER----NELW--IPH--YEN--P-------------VSWPIG--G------ELK-PD-G-EHWT-----------------------FTAEAI-N-----------IATTFLKSEGIELTPVKMVIETEL-IDQSGA---KYGLGSSAAATVAVINALMTKFYP---------------EISMLKKFKLAALSHLV-V-Q-GNGSCGDIASCMYG---G-----W---IAYTTFDQEW-V-----KHR--------LAYKS-LEWFMKEPWPMLQIETL-EEPV-PTFSVGWTGTP-V--ST------------GK-L--------VSQIH-------A--FKQEDSKN---------Y--------Q--------------------H-------------FLT---R----N----NE--IMKQIIQAF-------HTKDEELLYSSIKENRRILQE--LGTKAGV---NIE------T-----SLLKELADSAEN---M-G-G-A--GKSSGSGGGDCGIAF---------------SKTKELA---EKLVNEWEKLGIKHLPFHTGR------------
28 HHSearch 67.5919% -99 - C4 -2CZ9 GAL1_PYRHO A:[1-328] -------------------MIKVKSPGRVNL----I------GEHT-DYTYG------Y---VMP---MAIN-L-YTK-----IEAEKHGE----VILY--SEH--FGE--ERK-----------F-------SLNDL--R---KE-N-SWID-----------------------YVKGIF-W-----------VLKES----DYEVGGIKGRVSGNL-P----LG---AGLSSSASFEVGILETLDKLYNL---------------KLDSLSKVLLAKKAENE-F-VGVPCGILDQFAVVFGREGN-----V---IFLD-THTL--------DYE--------YI---------------------PFPKD-VSILVFYTGVR-------------------SSE--------YAERKHIAEESLK--ILGKGSSKEVREGELSKL--------P--------------------PLHRK---------FFGYIVR----E----NA--RVLEVRDAL-------KEGNVEEVGKILTTAHWDLAKN-YE---------VS------C-----KELDFFVERALK---L-GAY-G--ARLTGAGFGGSAIAL---------------VDKED-A---ETIGEEILREYLKRFPWKARH------------
21 HHSearch 64.0921% -87 - C4 -1KKH MVK_METJA A:[6-314] --------------------MIIETPSKVIL----F------GEHA-VVYGY------R---AIS---MAID-L-TST-----IEIKETQE----DEIILNLND--LNK--SLGLN---------LN------EIKN---IN--PNNF-GDFK-----------------------YCLCAI-K-----------NTLDYLNI--EPKTGFKINISSKI-P----IS---CGLGSSASITIGTIKAVSGFYNK---------------ELKDDEIAKLGYMVEKE-I-Q-GKASITDTSTITYK---G-----I---LEIK-NNKFR-K-----------------IKG---------EFE-------EFLKN-CKFLIVYAEKRKK--KT------------AE-L--------VNEVA-------K--IE---------------------------------------------N-------------KDE---I----F----KE--IDKVIDEAL-------KIKNKEDFGKLMTKNHELLKK--LN---------IS------T-----PKLDRIVDIGNR---F-G-F-G--AKLTGAGGGGCVIIL---------------VNEEK-E---KELLKELNKEDVRIFNCRMMN------------
23 HHSearch 62.5216%-105 - C4 -1KVK KIME_RAT A:[5-371] -------------------VLLVSAPGKVIL----H------GEHA-VVHGK------V---ALA---VALN-L-RTF-----LVLRPQSN----GKVSLNLPN--VGI--KQVWDVATLQLLDT----------------E--KL-K-KVAG-----------------------LPRDCV-GNEGLSLLAFLYLYLAICRKQ-RTLPSLDIMVWSEL-P----PG---AGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERV-I-H-GNPSGVDNSVSTWG---G-----A---LRYQ-QGKMS------------------SLK---------------------RLPA-LQILLTNTKVP-R--ST------------KA-L--------VAGVR-------S--RLIKFPEI---------M--------A--------------------P-------------LLT---S----I----DA--ISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNA--LG---------VG------H-----ASLDQLCQVTAA---H-G-L-H--SKLTGAGGGGCGITL---------------LKPGLERAKVEAAKQALTGCGFDCWETSIGA------------
24 HHSearch 62.1522% -83 - C4 -2OI2 ? A:[5-288] -------------------VGVGQAHSKIIL----I------GEHA-VVYGY------P---AIS---LPLL-EVEVT-----CKVVPAES----P-WR--LY----E-------------------------------------E-D-TLSM-----------------------AVYAS----------------LEY---LNITEACIRCEID---------EK---RGMGSSAAISIAAIRAVFDYYQA---------------DLPHDVLEILVNRAEMI-A-H-MNPSGLDAKTCLSD---Q-----P---IRFI-KNVG---------FT--------ELE---------------------MDLS-AYLVIADTGVY-G--HT------------RE-A--------IQVVQ-------N--KGKD-------------A--------L--------------------P-------------FLH---A----L----GE--LTQQAEIAI-------SQKDAEGLGQILSQAHLHLKE--IG---------VS------S-----LEADSLVETALS---H-GAL-G--AKMSGGGLGGCIIAL---------------VTNLTHA---QELAERLEEKGAVQTWIESL-------------
25 HHSearch 61.5718% -86 - C4 -1PIE GAL1_LACLA A:[49-392] --------------------EYFFSPGRINL----I------GEHT-DYNGG------Y---VFP---ASIT-I-GTT-----GLARLRED----KKVKLYSEN--FPK--LGV-----------IEFDLD--E------VEKKDG-E-LWSN-----------------------YVKGMI-V-----------MLKGA---GYEIDKGFELLIKGEI-P----TA---SGLSSSASLELLVGVVLDDLFNL---------------NVPRLELVQLGQKTEND-YIG-VNSGILDQFAIGFG---E-----V---KKAI-ELDCNTL-----KYE--------MVP-------------------VEL-RD-YDIVIMNTNKP-R--ALTESKYNERFAETRE-A--------LKRMQ-------T--RL---------------DIQSLGELSN--------------------EEFDANTDLIGDETLIK---RARHAVYE--NN--RTKIAQKAF-------VAGNLTKFGELLNASHASLKD--DYE--------VT------G-----LELDTLAETAQKQ--A-GVL-G--ARMTGAGFGGCAIAL---------------VAHDN-V---SAFRKAVGQVYEEVVGYPASF------------
42 Fugue 59.5721% -72 - C4 -2OI2 ? A:[4-292] ------------------KVGVGQAHSKIIL----I------GEHAVVYGY-----------------PAIS-L-PLL-----EVEVTCKV----VPAE--SPW--RLY--E-------------E-------D-------------------------------------------------------------TLSMAVYASLEYLNITEACIRCEI-D----E---KRGMGSSAAISIAAIRAVFDYYQA---------------DLPHDVLEILVNRAEMI-A-H-MNPSGLDAKTCLSD---Q-----P---IRFI-K-------------------------------------NV-GFTELEMDLS-AYLVIADTGVY-G--HT------------RE-A--------IQVVQ-------NKGKD---------------A--------L--------------------P-------------FLH---A----L----GE--LTQQAEIAI-------SQKDAEGLGQILSQAHLHLKE--IGV-------S--------S-----LEADSLVETALS---H-G-ALG--AKMSGGGLGGCIIAL---------------VTNLTHA---QELAERLEEKGAVQTWIESL-------------
44 Fugue 59.5015% -82 - C4 -1H74 KHSE_METJA A:[1-296] ------------------------MKVRVKA----P------CTSANLGVGFDVF---G---LCL---KEPY-D-VIE-----VEAIDDKE----IIIE--VD--------D-------------K-------N------I---PT-D-PDKN-----------------------VAGIVA-K-----------KMIDDF----NIGKGVKITIKKGV-K-------AGSGLGSSAASSAGTAYAINELFKL---------------NLDKLKLVDYASYGELA-S-S-GAKHADNVAPAIFG---G-----F---TMVT-NYE-----------------------------------PL-EVLHIPIDFK-LDILIAIPNIS-I--NT------------KE-A--------REILP-------K--AV---------------G--------L--------------------K-------------DLV---N----N----VG--KACGMVYAL-------YNKDKSLFGRYMMSDKVIEPV--RGK-------LI-------------PNYFKIKEEVKD---K-V-Y-G--ITISGSG---PSIIA---------------FPKEEFI---DEVENILRDYYENTIRTEVGKGVEVV-------
31 HHSearch 58.5015% -80 * C4 *1H72 KHSE_METJA C:[2-286] -------------------KVRVKAPCTSAN----L------GVGF-D--------------VFG---LCLKEP-YDV-----IEVEAIDD----KEII--IE---VDD----------------K-------N------I---PT-D-PDKN-----------------------VAGIVA-K-----------KMIDD---F-NIGKGVKITIKKGV-K----AG---SGLGSSAASSAGTAYAINELFKL---------------NLDKLKLVDYASYGELA-S-S-GAKHADNVAPAIFG---G-----F---TMVT-NYEP--L-----EVL-----------------------------HIPIDFK-LDILIAIPNIS-I--NT------------KE-A--------REILP-------K--AVG--------------L--------K--------------------D-------------LVN---N----V----GK---ACGMVYAL-------YNKDKSLFGRYMMSDKVIEPV--RG---------KL------I-----PNYFKIKEEVKD-----KVY-G--ITISGS--GPSIIAF---------------PKEEF-I---DEVENILRDYYENTIRTEVGK------------
46 Fugue 57.6215% -79 - C4 -1FWK KHSE_METJA A:[1-296] ------------------------MKVRVKA----P------CTSANLGVGFDVF---G---LCL---KEPY-D-VIE-----VEAIDDKE----IIIE--VD--------D-------------K-------N------I---PT-D-PDKN-----------------------VAGIVA-K-----------KMIDDF----NIGKGVKITIKKGV-K-------AGSGLGSSAASSAGTAYAINELFKL---------------NLDKLKLVDYASYGELA-S-S-GAKHADNVAPAIFG---G-----F---TMVT-NYEPL------------------------------------EVLHIPIDFK-LDILIAIPNIS-I--NT------------KE-A--------REILP-------K--AV---------------G--------L--------------------K-------------DLV---N----N----VG--KACGMVYAL-------YNKDKSLFGRYMMSDKVIEPV--RGK-------LI-------------PNYFKIKEEVKD---K-V-Y-G--ITISGSG---PSIIA---------------FPKEEFI---DEVENILRDYYENTIRTEVGKGVEVV-------
37 HHSearch 57.2414% -92 - C4 -3QT5 - ? A:[5-307] --------------------GKARAHTNIAL----I------KYWG-KADETYIIPMNN---SLS---VTLD-RFYTE-----TKVTFDPD----FTED--CLI--LNG--N----------------------------E---VN-A-KEKE-----------------------KIQNYM-N-----------IVRDL---A-GNRLHARIESENYV-P----TA---AGLASSASAYAALAAACNEALSL---------------NLSDTDLSRLARRGS-----------G-SASRSIFG---G-----F---AEWE-KGHDD-LTS---YAH--------GINS--------NGWE--------KDLS-MIFVVINNQSK-K---S------------RS-G--------MSLTR-------D--TSRF-------------Y--------Q--------------------Y-------------WLD---H----V----DE--DLNEAKEAV-------KNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQE------S-----YDAMAIVEQCRK---A-N-L-P--CYFTMDAGP-NVKVL---------------VEKKN-K---QAVMEQFLKVFDESKIIASDI------------
27 HHSearch 56.2911% -81 - C4 -1WUU GALK1_HUMAN A:[36-377] -------------------ELAVSAPGRVNL----I------GEHT-DYNQG------L---VLP---MALE-L-MTV-----LVGSPRKD----GLVSLLTTSEGADEPQRLQFP---------LPTAQRSLE------P---GT-P-RWAN-----------------------YVKGVI-Q-----------YYPA------APLPGFSAVVVSSV-P----LG---GGLSSSASLEVATYTFLQQLCPD---------------SGTIAARAQVCQQAEHS-F-AGMPCGIMDQFISLMG---Q-----KGHALLID-CRSLE-T-------S--------LVP-------------------L-SDPK-LAVLITNSNVR-H----------------AS-SEYPVRRRQCEEVA-------R--AL---------------G--------KESLREVQLEELEAARDLVSKE-------------GFR---R----ARHVVGEIRRTAQAAAAL-------RRGDYRAFGRLMVESHRSLRD--DYE--------VS------C-----PELDQLVEAALA---VPGVY-G--SRMTGGGFGGCTVTL---------------LEASA-A---PHAMRHIQEHYGGTATFYLSQ------------
43 Fugue 55.9512% -71 - C4 -1H72 KHSE_METJA C:[1-296] ------------------------MKVRVKA----P------CTSANLGVGFDVF---G---LCL---KEPY-D-VIE-----VEAIDDKE----IIIE--VD--------D-------------K-------N------I---PT-D-PDKN-----------------------VAGIVA-K-----------KMIDDF----NIGKGVKITIKKGV-K-------AGSGLGSSAASSAGTAYAINELFKL---------------NLDKLKLVDYASYGELA-S-S-GAKHADNVAPAIFG---G-----F---TMVT-NYE-----------------------------------PL-EVLHIPIDFK-LDILIAIPNIS-I--NT------------KE-A--------REILP-------K--AV---------------G--------L--------------------K-------------DLV---N----N----VG--KACGMVYAL-------YNKDKSLFGRYMMSD-----K--VIE-------PVR------G-----KLIPNYFKIKEE---V-K-D-K--VYGITISGSGPSIIA---------------FPKEEFI---DEVENILRDYYENTIRTEVGKGVEVV-------
36 HHSearch 55.7713% -86 - C4 -2GS8 ? A:[9-303] --------------------ITVTSYANIAI----IKYWGKENQAK-MIPST------S---SIS---LTLENM-FTT-----TSVSFLPDTATSDQFY--IN-----G--I---------------------L------Q---N----DEEH-----------------------TKISAIID-----------QFRQ------PGQAFVKMETQNNM-P----TA---AGLSSSSSGLSALVKACDQLFDT---------------QLDQKALAQKAKFASG------------SSSRSFFG---P-----V---AAWD-KDSGA--------IY--------KVE------------------TD-LKMA-MIMLVLNAAKK-PISSR------------EG-M--------KLCRD-------T--STT--------------F--------D--------------------Q-------------WVE---Q----S----AI--DYQHMLTYL-------KTNNFEKVGQLTEANALAMHA--TTKTANPPF-SYL------T-----KESYQAMEAVKELRQE-GFA-C--YFTMDA--GPNVKVL---------------CLEKD-L---AQLAERLGKNYRIIVSKTKDL------------
32 HHSearch 55.4615% -79 - C4 -3PYF ISPE_MYCTU A:[5-282] -------------------SVTVRVPGKVNLYLAVG------DRRE--D-GY------H---ELTTVFHAVS-L-VDE-----VTVRNADV----LSLE--LVG---EG--A-------------D-------Q------L----P-T-DERN-----------------------LAWQAA-E-----------LMAEHV----GRAPDVSIMIDKSI-P----VA---GGMAGGSADAAAVLVAMNSLWEL---------------NVPRRDLRMLAARLG------------SDVPFALHG---G-----T---ALGT-GRGE--------ELA--------TVL---------------------SRNT-FHWVLAFADSG-L--LT------------SA-V--------YNELD-------R--LR---------------E--------V--------------------G-------------DPP---R----L----GE---PGPVLAAL-------AAGDPDQLAPLLGNEMQA--A--AV---------SL------D-----PALARALRAGVE---A-GAL-A--GIVSGSG--PTCAFL---------------CTSASSA---IDVGAQLSGAGVCRTVRVATG------------
45 Fugue 54.4516% -57 - C4 -1PIE GAL1_LACLA A:[29-416] TVLSALTEKFAEVFGDTKEVEYFFSPGRINL----I------GEHTDYNGGY------VFPASIT---IGTT-G-LARLREDKKVKLYSEN----FPKL--GVI--EFD--L-------------D-------E------V---EK-K-DGEL-----------------------WSNYVK-G-----------MIVMLKGAGYEIDKGFELLIKGEI-P----T---ASGLSSSASLELLVGVVLDDLFNL---------------NVPRLELVQLGQKTENDYI-G-VNSGILDQFAIGFG---EVKKAIE---LDCN-TLKYE-M-----VPVELRDYDIVIMNTNKPRALTESKYNE-RFAETREALKRMQTRLDIQSLG-E--LS------------NE-E--------FDANT-------D--LI---------------G--------D--------------------E-------------TLI---K----R----AR--HAVYENNRT-------KIAQKAFVAGNLTKFGELLNA--SHA-------SLKDDYEVTG-----LELDTLAETAQK---Q-A-G-VLGARMTGAGFGGCAIAL----------------VAHDNV---SAFRKAVGQVYEEVVGYPASFYVAQIGSGSTKL
41 Fugue 54.2216% -76 - C4 -1KVK KIME_RAT A:[1-394] ---------------MLSEVLLVSAPGKVIL----H------GEHAVVH-GK------V---ALA---VALN-L-RTF-----LVLRPQSN----GKVS--LNL--PNV--G-------------I-------K------Q---VW-D-VATLQLLDTEKLKKVAGLPRDCVGNEGLSLLAF-L-----------YLYLAICRKQRTLPSLDIMVWSEL-P----P---GAGLGSSAAYSVCVAAALLTACE-----------------EVTNPLKDRGSIGSWP-E-E-DLKSINKWAYEGER---V-----I---HGNP-SGVDN-S-----VST--------W------GGALRYQQG--KMSSLKRLPA-LQILLTNTKVP-R--ST------------KA-L--------VAGVR-------S--RL---------------IKFPEIM--A--------------------P-------------LLT---S----I----DA--ISLECERVL-------GEMAAAPVPEQYLVLEELMDM--NQH-------HLN------ALGVGHASLDQLCQVTAA---H-G-L-H--SKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGF---DCWETSIGAPGVSMHSATSIEDPVRQALG----