@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1419: (2015-12-07 )
MTLRELTIEEFKEHSGNYDSQSFLQTPEMAKLLEKRGYDVRYLGYQVENKLEIISLSYIMPVTGGFQMKIDSGPVHSNSKYLKQFYKALQGYAKSNGVLELIVEPYDDYQLFTSSGVPSNQGNDNLIEDFTSSGYHHDGLTTGFTGKYLSWHYVKNLEGVTSETLLSSFSKTGRALVKKAMSFGIKVRVLKRDELHLFKEITTSTSNRRDYMDKSLDYYQDFYDSFEGKAEFVIATLNFREYDHNLQIKAEALENKLKLLDERFRENADSPKYHRQRSEIINQLASFETRRQEVQSFIQKYDNQDVVLAGSLFVYSLKETVYFFSGSYTEFNKFYAPAVLQEYVMQEALKRGSTFYNLLGIQGTFDGSDSILRFKQNFNGYIIRKMGTFNYYPSPFKYKGIQLLKKVLKRN

Atome Classification :

(20 SA) -....---...-..10........20........30........40....-....50...-....-.60-....--....70.....--.-...80-.........90.....---.--..100.......110....-...120.......130.......140---..-...-..150........160-.-.......170.....-..180.------.....---.-190-.........200.......210.--....-..220....-..-.230.......240.......250.......260.----------......270..-......280.......290.......300.......310....------..-------.320.......330.......340.......350.-.......360......-.---370.......380.-.......390........400.......410------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -MTLR---ELT-IEEFKEHSGNYDSQSFLQTPEMAKLLEKRGYDVRYLGY-QVENKLEII-SLSY-IMP-VTGG--FQMKI-DSGPV--H-SNSK--YLKQFYKALQGYAKSN---G--VLELIVEPYDDYQLFTSSG-VPSNQGNDNLIEDFTSSGYHHDGLTT---GF-TGK-YLS-WHYVKNLEGVT--S-ETLLSSFSKTGRALV-KKAMSF------GIKVR---V-L---KRDELHLFKEITTSTSNRRDYMD--KSLD-YYQDFYDSF-EG-KAEFVIATLNFREYDHNLQIKAEALENKLKLLDER----------FRENADS-PKY-HRQRSEIINQLASFETRRQEVQSFIQKYDNQDVVLAGSLFVYS------LK-------ETVYFFSGSYTEFNKFYAPAVLQEYVMQEALKR-G-STFYNLLGIQGTFDGS-D---SILRFKQNFNGY-I-IRKMGTFNY-YPSPFKYKGIQLLKKVLKRN-------------
42 Fugue 96.9124% -77 - C2 -1LRZ - FEMA_STAAU A:[1-412] -MKFT---NLT-AKEFGAFTDSMPYSHFTQTVGHYELKLAEGYETHLVGI-KNNNNEVIA-ACLL-TAV-PVMKVFKYFYS-NRGPVIDY-ENQE--LVHFFFNELSKYVKKH---R--CLYLHIDPYLPYQYLNHDGEITGNAGNDWFFDKMSNLGFEHTGFHK---GF-DPV-LQIRYHSVLDLKDKT--A-DDIIKNMDGLRKRNT-KKVKKN------GVKVR---F-L---SEEELPIFRSFMD--------------DK-FYYNRLKYY-KD-RVLVPLAYINFDEYIKELNEERDILNKDLNKALKD----------IEKRPEN-KKA-HNKRDNLQQQLDANEQKIEEGKRLQEEHGN-ELPISAGFFFIN------PF-------EVVYYAGGTSNAFRHFAGSYAVQWEMINYALNH-G-IDRYNFYGVSGKFTED-AEDAGVVKFKKGYNAE-I-IEYVGDFIK-PINKPVYAAYTAL--------------------
43 Fugue 69.7816% -58 - C2 -1P4N FEMX_WEIVI A:[1-335] -PVLNLNDPQA-VERYEEFMRQSPYGQVTQDLGWAKV--KNNWEPVDVYLEDDQGAIIAA-MSML-LGD-TPTD--KKFAYASKGPVMDV-TDVD--LLDRLVDEAVKALDGR---A--YVLRF-----------DPE-VAYSDEFNTTLQDHGYVTRNRNVADA---GM-HATIQPR-LNMVLDLTKFP--DAKTTLDLYPSKTKSKI-KRPFRD------GVEVH---SGN---SATELDEFFKTYTTMAERHGITH--RPIE-YFQRMQAAFDAD-TMRIFVAERE------------------------------------------------------------------------------GKLLSTGIALKY------GR-------KIWYMYAGSMDGNTY-YAPYAVQSEMIQWALDT-N-TDLYDLGGIESE-STD-D---SLYVFKHVFVKDAP-REYIGEIDK-VLDPEVYAEL-------VKD-------------
22 HHSearch 68.3018% -65 * C2 *3GKR FEMX_WEIVI A:[7-334] ---ND---PQA-VERYEEFMRQSPYGQVTQDLGWAKVKN--NWEPVDVYL-EDDQGAIIAAMSML-LGDTPTDK--KFAYA-SKGPV--M-DVTDVDLLDRLVDEAVKALDG----R--AYVLRFDPEVAYS--------------DEFNTTLQDHGYVTRNRNVADAGMHATI-QPR-LNMVLDLTK-FPDA-KTTLDLYPSKTKSKI-KRPFRD------GVEVH---S-GN--SATELDEFFKTYTTMAERHGITH--RPIE-YFQRMQAAF-DADTMRIFVAER------------------------------------------------------------------------------EGKLLSTGIALKY------GR-------KIWYMYAGSMDG-NTYYAPYAVQSEMIQWALDT-N-TDLYDLGGIESEST-D-D---SLYVFKHVFVKD-APREYIGEIDK-VLDPEVYAELVKD--------------------
23 HHSearch 48.1412% -43 - C2 -2HQY ? A:[63-285] --------------------------------------------------------------------------------A-YMMPV--G-NGD----LKAVLRKLIEDADKE---KHNFCMLGVCSNMRA--------------------DLEAILPERFIF--------TED-RAY-ADYIYLRSD----L-ATLKGKKFQAKRNHI-NRFRNTYP----DYEYT---P-ITPDRIQECLDLEAEWCKVNNCDQQEGTGNERR-ALIYALHNF-EALGLTGGILHV------------------------------------------------------------------------------NGKIVAFTFGMPIN-----HE-------TFGVHVEKADTS--IDGAYAMINYEFANRI-PE-Q-YIYINREEDLGI-----E---GLRKAKLSYQPV-T-ILEKYMACL-KDH------------------------------
9 PsiBlast_PDB 48.0221% -38 - C2 -3THX MSH3_HUMAN B:[466-601] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEHYLKILNEQAAKVGDKTELFKDLSDF-PLI-KKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIE------IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENY------------RHLNQLREQLVLDCS-A---EWLDFLEKFSEH-Y-HSLCKAVHH-LATVDCIFSLAKVAKQGDYC-------------
47 Fugue 47.2614% -22 - C2 -3TNF ? B:[3-381] -LDEY---EQA-IKRAQEN------------IKKGEELEKKLDKLERQGK-DLEDKYKTY-EENL-E------G--FEKLL-TDSEE--L-S------LSEINEKMEAFSKDS---E--KLTQLMEKHKG-------D-EKTVQSLQREHHDIKAKLANLQVLHD---AH-TGK-K----SYVNEKGNPV--S-S------------LK-DAHLAI------NKDQE---V-V---EHEGQFYLLQKGQWDAIKNN--P--AALE-KAQKDYSQS-KH-DLATIKMEALIHKLSLEMEKQLETINNLIMSTDPK----------ENEEATK-LLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEEVTSLNDAHYVIG------KD-------QQLFNLGGKFYPIHK--EQKILEKDGKFYLLKQ-G-EDWESIKDSPEKQKKA-E---HDFHKLQYETPM-T-VKKLVHHNKGLETTIHKERVEETKQQLEDNGKEKIEIANNISK
10 PsiBlast_PDB 47.1521% -37 - C2 -3THY MSH3_HUMAN B:[466-601] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEHYLKILNEQAAKVGDKTELFKDLSDF-PLI-KKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIE------IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENY------------RHLNQLREQLVLDCS-A---EWLDFLEKFSEH-Y-HSLCKAVHH-LATVDCIFSLAKVAKQGDYC-------------
11 PsiBlast_PDB 45.7021% -26 - C2 -3THZ MSH3_HUMAN B:[466-601] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEHYLKILNEQAAKVGDKTELFKDLSDF-PLI-KKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIE------IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENY------------RHLNQLREQLVLDCS-A---EWLDFLEKFSEH-Y-HSLCKAVHH-LATVDCIFSLAKVAKQGDYC-------------
13 PsiBlast_PDB 45.5323% -21 - C3 -1QCN FAAA_MOUSE A:[52-232] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------F-TGP-ALS-KH-----QHVF--D-ETTLNNFMGLGQAAW-KEARASLQNLLSASQAR---L------RDDKELRQRAFTSQASATMHLP--ATIG-DYTDFYSS----------------RQHATNVGIMFRGKEN--ALLPNW----------LHLPV----GY-HGRASSIV--VSGTPIRRPMGQM---RPDNSKPPVYGACRLLD------ME-------LEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMN-D-WSARDIQQWEYVPLGP-F---LGKSFGTTISPW-V-VPMDALMPF-VVPNPKQDPKPLPYLCHSQP-------------
16 PsiBlast_PDB 44.5923% -18 - C3 -1QQJ FAAA_MOUSE A:[50-214] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------F-TGP-ALS-KH-----QHVF--D-ETTLNNFMGLGQAAW-KEARASLQNLLSASQAR---L------RDDKELRQRAFTSQASATMHLP--ATIG-DYTDFYSS----------------RQHATNVGIMFRGKEN--ALLPNW----------LHLPVG----Y-HGRASSIV--VSGTPIRRPMGQ---MRPDNSKPPVYGACRLLD------ME-------LEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMN-D-WSARDIQQWEYVPLGP-F---LGKSFGTTISPW-V-VPMDALMPF-VVPNPKQDPKPLPYLCHSQP-------------
8 PsiBlast_PDB 44.5721% -28 - C2 -3THW - MSH3_HUMAN B:[466-601] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEHYLKILNEQAAKVGDKTELFKDLSDF-PLI-KKRKDEIQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIE------IKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVENY------------RHLNQLREQLVLDCS-A---EWLDFLEKFSEH-Y-HSLCKAVHH-LATVDCIFSLAKVAKQGDYC-------------
12 PsiBlast_PDB 42.6023% -17 - C3 -1QCO FAAA_MOUSE A:[52-216] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------F-TGP-ALS-KH-----QHVF--D-ETTLNNFMGLGQAAW-KEARASLQNLLSASQAR---L------RDDKELRQRAFTSQASATMHLP--ATIG-DYTDFYSS----------------RQHATNVGIMFRGKEN--ALLPNW----------LHLPV----GY-HGRASSIV--VSGTPIRRPMGQ---MRPDNSKPPVYGACRLLD------ME-------LEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMN-D-WSARDIQQWEYVPLGP-F---LGKSFGTTISPW-V-VPMDALMPF-VVPNPKQDPKPLPYLCHSQP-------------
14 PsiBlast_PDB 42.0223% -17 - C3 -1HYO FAAA_MOUSE A:[52-216] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------F-TGP-ALS-KH-----QHVF--D-ETTLNNFMGLGQAAW-KEARASLQNLLSASQAR---L------RDDKELRQRAFTSQASATMHLP--ATIG-DYTDFYSS----------------RQHATNVGIMFRGKEN--ALLPNW----------LHLPVG----Y-HGRASSIV--VSGTPIRRPMGQ---MRPDNSKPPVYGACRLLD------ME-------LEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMN-D-WSARDIQQWEYVPLGP-F---LGKSFGTTISPW-V-VPMDALMPF-VVPNPKQDPKPLPYLCHSQP-------------
15 PsiBlast_PDB 41.9823% -15 * C3 *2HZY FAAA_MOUSE A:[52-216] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------F-TGP-ALS-KH-----QHVF--D-ETTLNNFMGLGQAAW-KEARASLQNLLSASQAR---L------RDDKELRQRAFTSQASATMHLP--ATIG-DYTDFYSS----------------RQHATNVGIMFRGKEN--ALLPNW----------LHLPVG----Y-HGRASSIV--VSGTPIRRPMGQ---MRPDNSKPPVYGACRLLD------ME-------LEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMN-D-WSARDIQQWEYVPLGP-F---LGKSFGTTISPW-V-VPMDALMPF-VVPNPKQDPKPLPYLCHSQP-------------
7 PsiBlast_PDB 40.4031% -35 - C2 -1XF8 - FEMX_WEIVI A:[252-308] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IWFMYAGSMDGNTYYAPYAVQSEMIQWALDT-N-TDLYDLGGIESE-STD-D---SLYVFKHVFVKD-A-PREYIGEID-KVLDPEVYAELVKD-------------------
25 HHSearch 40.1815% -34 - C2 -3DSB ? A:[63-144] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDKVVAQIMYTYEWSDWRNGN-------FLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDEN-IVGMRLYVEKEN-----I---NAKATYESLNMY-E-CDYNMYEYE-VIH------------------------------
49 Fugue 39.339% -5 - C1 -3GYC ? A:[13-393] EISPR---AITMWD-FSWLERRWPGAGYEDWDQVLDELSERGYNAIRIDA-Y----PHLI-AENPMKKW-LLKE--VWNQQ-DWGSP--DMNEVQ--VQPNLNLFLSKCKERDIKVG--LSSWYRLDVDEVCLKLDTP-EKLADCWLTILRSIEEDGLLDTILYV---DL-CNE-WPG-DSWAPFFAKTY--P-NVGWGNWYKEESLRWMKTSLEKM-----RQVYPDMPF-L---YSFDHGDVKKYEEVDCSFLDLYE--HHIWMAQQNGGEFY-K--LVGYGYNRFLPDDYKNVVKNAERVYRERPGYWQKL----------LTDKIELMASV-ARKNRRPLVTTECWGLVDYKDWPLLKW-----------------------------------------------DWVKDLCELGTITAART-GMWVGVATSNFCGPQFAGMW---RDVEWHKRLTSI-I-RSSPLDESL-T------KNNEVAAKLLKRL-------------
26 HHSearch 39.078% -13 - C2 -3I9S ? A:[82-162] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HDKVLGFATYTIMFPAPKLSG-------QMYMKDLFVSSSARGKGIGLQLMKHLATIAITH-N-CQRLDWTAESTN-----P---TAGKFYKSIGAS-L-IREKEYYRF-EGNGLNKLAKSL---------------------
1 PsiBlast_PDB 38.9535% -12 - C2 -1XE4 FEMX_WEIVI A:[254-308] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YMYAGS-MDGNTYYAPYAVQSEMIQWALDT-N-TDLYDLGGIESE-STD-D---SLYVFKHVFVKD-A-PREYIGEID-KVLDPEVYAELVKD-------------------
3 PsiBlast_PDB 38.9435% -8 - C2 -1P4N FEMX_WEIVI A:[254-308] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YMYAGS-MDGNTYYAPYAVQSEMIQWALDT-N-TDLYDLGGIESE-STD-D---SLYVFKHVFVKD-A-PREYIGEID-KVLDPEVYAELVKD-------------------