@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1420: (2015-12-07 )
MKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVTSPVFADQTTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTPLVETKPMVEKTLPEQGNYVYSKETEVKNTPSKSAPVAFYAKKGDKVFYDQVFNKDNVKWISYKSFCGVRRYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQGNYTFSHKVEVKNEAKVASPTQFTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQPQARITKTGRLTISNETTTGFDILITNIKDDNGIAAVKVPVWTEQGGQDDIKWYTAVTTGDGNYKVAVSFADHKNEKGLYNIHLYYQEASGTLVGVTGTKVTVAGTNSSQEPIENGLAKTGVYNIIGSTEVKNEAKISSQTQFTLEKGDKINYDQVLTADGYQWISYKSYSGVRRYIPVKKLTTSSEKAKDEATKPTSYPNLPKTGTYTFTKTVDVKSQPKVSSPVEFNFQKGEKIHYDQVLVVDGHQWISYKSYSGIRRYIEI

Atome Classification :

(20 SA) -----------------.........10........20........30...---..---...40---........50........60........70........80........90......----..100.......110..---------....----------.120..-.....130......-------------.140......---------.150....------------...--160....-------...170.......180.......190.......200-.......210..-.....220..-.....230.......240.......250.......260.......270.......---280.......290.......300--....----....310.......320...---...-.330.----......340.--......350.......360---.-----.....-...370..--.....380.......390.....------....400.......410....--...420.......430..--------------...---..440.......450.......460.-----......470.......480-........490....-..---.500-...------------....510..-----.....520.---...--...530.......540.------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------MKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVT---SP---VFADQ---TTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTP----LVETKPMVEKTLPEQGN---------YVYS----------KETEVK-NTPSKSAPVAFYAK-------------KGDKVFYDQV---------FNKDNVKW------------ISY--KSFCGVR-------RYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQ-GNYTFSHKVEVK-NEAKVASPTQ-FTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQ---PQARITKTGRLTISNETTTGFD---ILIT----NIKDDNGIAAVKVPVWTEQG---GQD-DIKWY----TAVTTGDGNY--KVAVSFADHKNEKGLYN-----I-----HLYYQ-EASGTLVG--VTGTKVTVAGTNSSQE--PIENG------LAKTGVYNIIGSTEVKNEAKI--SSQTQFTLEKGDKINYDQ--------------VLT---ADGYQWISYKSYSGVRRYIPVKKLTT-----SSEKAKDEATKPTSYPNL--PKTGTYTFTKTVDVK-SQ---PKVS-SPV------------EFNFQKGEK-----IHYDQVLVV---DGH--QWISYKSYSGIRRYIEI------------------
27 Fugue 77.1317% 17 * C7 *2ZB6 HEMA_MEASE A:[12-462] ----------------------VAAEELMNALSKGNCS-----------------------GPT---TIRGQFSNMSLSLLDLYLGRG-YNVSSIVTMTSQGMYGGTYLVEKPNL-SQLSMYR----VFEVGVIRN---PGLGA---------PVFH----------MTNYLE-QPVSNDLSNCMVAL--------------GELKLAALC---------HGEDSITI------------PYQ--GSGKGVS-------FQLVKLGVWKS-------PTDMQSWVPLSTDDPVID-RLYLSSHRGVIADNQAKWAVPTT-RTDDKLRMETCFQQAC-----------------------KGKIQALCENPEWAPL---KDNRIPSYGVLSVDLSLTVELK---IKIA----SGFG---------PLITHGS---GMD-LYK---------SNHNNVY--WLTIPPMKNL-------------------------ALGVINT--LEWIPRFKVSPYLFTV--PIKEA------GGDCHAPTYL-PAEVDGDVKL--SSNL-------------V--------------ILP---GQDLQYVLATYDTSRVEHAVVYYVYS-----PS-------------------RSFSYFYPFRLPIK-GV---P-IE-LQV------------EC-FTWDQK-----LWCRHFCVLADSESG--GHITHSGMVGMGVSCT-------------------
31 Fugue 75.0518% 14 - C7 -1Q9J - PAPA5_MYCTU A:[1-418] -----------------MFPGSVIRK---LSHSEEVFAQYEVFTSMTIQLR---GV---I------------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELR----LDQSVSLLHLQLILREG-----------------------------------GAELTLYLH----------------HCMADGH---------HGAVLVDE------------LFS--------R-------YTDAVTTGDP--GPITPQPTPL------SMEAVLAQ-RGIRKAERFMSV-MYAYPGLPQA-VPVTRL---------------WLSKQQTSDLMAFG-----------------------------REHRL--SLNAVVAAA---ILLT----EWQLRN--------------------------------------TP--HVPIPYVYPVDLRFVLA-----P-----PVAPT-EAT-NLLG--AASYLAEIG---------------------PNTDIVDLASDIVATLRADL--ANG-----------------------------VIQ---QSGLH--FGTAFEGTPPGLPPLVFCT-----D----------ATSFPTM--RTPPGL---EIEDIK-GQ---FYCS-ISV------------PLDLYSCAV-----YAGQLIIEH---HGH--IAEPGKSLEAIRSLLCTVPSEYG------------
24 Fugue 73.6017% 21 - C5 -3WOL DAPB2_PSEMX A:[1-696] GEGMWVPQQLPEIAGPLKKAGLKLSPQQISDLTGDPMGAVVALGGCTASFV---SPNGLVVTNHHCAYGAIQLNSTAENNLIKNGFNAPTTADEVSAGPNARVFVLDEITDVTKDAKAAIAAAGDDALARTKALEAFEKKLIADCEAEAGFRCRLYSFSGGNTYRLFKNLEIK-DVRLAYAPPGSVGKFGGDIDNWMWPRHTGDFAFYRAYVGKDGKPAAFSKDNVPYQPKHWLKFADQPLGA--GDFVMVAGYPGSTNRYALAAEFDNTAQWTYPTIARHYKNQIAMVEAAGKQNADIQVKYAATMA-GWNNTSKNYD-GQLEGFKRIDAAGQKLREEAAVLGWLKGQGAKGQPALDAHAKLLDLLEQSKATRD---RDLTLALFNNTAMLGSATQLYR---LSIEREKPNAERESGYQERDLPAIEGGL---KQL-ERRYV----AAMDRQLQEYWLNEYIKLPADQRVAAVDA-----WLGGNDAAAVK-RALDRLAGTKLGSTEERLKWFAADRK--AFEASNDPAIQYAVAVMPTLLKLEQERKTRAG--ENLAARPVYLQALADYKKSQGEFVYPDANLSLRITFGNVMGYAPKDGMEYTPFTTLEGVVAKETGQDPFDSPKALLDAVAAKRYGGLEDKRIGSVPVNYLSDLD-IT---GGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPKMTRMIAV---DGRYLRWIMQEVYPAPQLLKEMNV----------------
26 Fugue 70.7817% 10 - C8 -1ZY7 RED1_HUMAN A:[8-402] -----------------SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSS---PHARR---KVLAGVVMTTGTDVKD---------AKVISVSTGTKCINGEYMSDRGLALNDCHAE----IISRRSLLRFLYTQLEL---------YLNN----------KDDQKR-SIFQKSERGGFRLK-----------------------------------ENVQF------------HLYISTSPCGDA-------RI-----FKARGQLRTKIESG--------------E-GTIPVRSNASIQ-TWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIIL------------------------------GSLYHGDHLSRAMY---QRIS----NIEDLPPLYTLNKPLLSGIS---NAE----------------------------ARQPGKAPNFS-----V-----NWTVG-DSAIEVIN--AT-TGKDELGRASR---------------LCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKE--------------YQA---AKARLFTAFIK-AGLGAWVE---------------------KPTEQDQF--SLT--------------------------------------------------------------------------------------------------------
29 Fugue 61.7217% 20 - C3 -1OKE POLG_DEN2P A:[1-394] -----------------MRC--IGISNRDFVEGVSGGSWVDIVLEHGSCVT---TM---AKNKP---TLDFELIKTEAKQ------------------------------------------P----ATLRKYCIEAKLT---------------------------NTTTES-RCPTQGEPTLNEEQ-------------DKRFVCKHSM---------VDRG------------------W--GNGCGL-----------------------------------FGKGGIVTC-AMFTCKKNMEGK-IV-------------QPENLEYTVVITP----------HSGEEHAV----GNDTGKHGKEVKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLL----QMKD-------KAWLVHRQW---FLDLPLPWL----PGADTQGSNW--IQKETLVTFKNPHA---------------------------------KKQDVVVLGSQEG--AMHTA------LT--------GATEIQM---------SSGNLLFTGHLKCRL--------------RMD---KLQLKGMSYSMCTG-----KFKVVKE-----IAETQHGTIVIRVQYEGD--GSPCKIPFEIM-DLE-KR---HVLG-RLI------------TVNPIVTEK-----DSPVNIEAEPP-FGD--SYIIIGVEPGQLKLNWFKK----------------
13 HHSearch 58.9229% -4 - C10 -1R77 - ALE1_STACP A:[279-344] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYK--SESASFTANTDIITRLTG---PFRS-MPQ------------SGVLRKGLT-----IKYDEVMKQ---DGH--VWVGYNTNSGKRVYLPV------------------
23 Fugue 58.2633% 22 * C10 *1R77 - ALE1_STACP A:[264-362] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDKVKLYKTNKYGTL--YKSESASFTANTDII-TRLTGPFRS-MPQ------------SGVLRKGLT-----IKYDEVMKQ---DGH--VWVGYNTNSGKRVYLPVRTWNESTGELGPLWGTIK
11 PsiBlast_CBE 57.9534% 14 - C10 -4LXC LSTP_STASI C:[157-229] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTNKYGTL--YKSESASFTPNTDII-TRTTGPFRS-MPQ------------SGVLKAGQT-----IHYDEVMKQ---DGH--VWVGYTGNSGQRIYLPV------------------
12 PsiBlast_CBE 56.3034% 10 - C10 -4LXC LSTP_STASI B:[157-229] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTNKYGTL--YKSESASFTPNTDII-TRTTGPFRS-MPQ------------SGVLKAGQT-----IHYDEVMKQ---DGH--VWVGYTGNSGQRIYLPV------------------
10 PsiBlast_CBE 54.8034% 14 - C10 -4LXC D:[157-229] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTNKYGTL--YKSESASFTPNTDII-TRTTGPFRS-MPQ------------SGVLKAGQT-----IHYDEVMKQ---DGH--VWVGYTGNSGQRIYLPV------------------
1 PsiBlast_PDB 54.6634% 11 - C10 -4LXC LSTP_STASI A:[157-229] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTNKYGTL--YKSESASFTPNTDII-TRTTGPFRS-MPQ------------SGVLKAGQT-----IHYDEVMKQ---DGH--VWVGYTGNSGQRIYLPV------------------
15 HHSearch 53.7922% 37 - C10 -1R77 - ALE1_STACP A:[279-348] ----------------------------------------------------------------------------------------------------------------------------------------LYKSESAS---------FTAN----------TDIITRLTGPFRSMPQSGVLR-------------KGLTIKYDEV---------MKQDGHVW------------VGY--NTNSGKR-------VYLPVRTWN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 53.1834% 9 - C10 -1R77 - ALE1_STACP A:[276-344] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGTL--YKSESASFTANTDII-TRLTGPFRS-MPQ------------SGVLRKGLT-----IKYDEVMKQ---DGH--VWVGYNTNSGKRVYLPV------------------
30 Fugue 51.4515% 26 - C8 -4P5W CMC2_HUMAN A:[31-394] -----------------------TKRADPAELRTIFLKYASIEKNGEFFMS---PN---DFV-----TRYLNIFSQP-------NPKTVELLSGVVDQTKDGLISFQEFVAFESVLCAPD---------ALFMVAFQLFDKAGK---------GEVT----------FE-DVK-QVFGQTTIHQHIPF-------------NWDSEFVQLH---------FGKERKRH------------LTY--AEFTQFL-------LEIQLEHAKQAFVQRDNARTGRVT-AIDFRDIMVTI-RPHVLTPFVEEC-LVAAAGGTTS-HQVSFSYFNGFNSLLNNMELIRKIYSTLAGTRKDVEVTKEEFVLAAQKFGQVTPM---EVDILFQLADLYEPRGRMTLAD---IERI----APPNPDHVGGYKLAVATFAG---IEN-KFGLY----L---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 42.2314% -8 * C8 *1DQG MRC1_MOUSE A:[2-135] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DARQ---FLIY----NEDHKRCVDALSAISVQTATCNPEAE-SQKFRWVSDSQIMSVAFKL--CLGVPSKTDWASVTLYACDSKSE-----YQKWE-CKNDTLFG--IKGTELYFNYGNRQEKNIKLYKG------SGLWSRWKVYGTTDDLCSRGY--E---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 39.9023% 18 * C11 *3BGY MCE_MIMIV A:[92-196] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQI---GEF-ITKFS----KASSNDISRY--IVSLDPSD--------D-----I-----EIVYKNRGSGKLIG--IDNWAITIKST--EEI--PLVAG------KSKISKPKITGSERIMYRYK----TRYSFTINKNSRIDITD--------------VKS---SPIIWKLMTVPSNYELELELINKIDI-----NTLESELLNVFMIIQD---------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 37.6623% 27 - C11 -2QZE - MCE_MIMIV A:[92-196] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQI---GEF-ITKFS----KASSNDISRY--IVSLDPSD--------D-----I-----EIVYKNR---KLIG--IDNWAITIKST--EEI--PLVAG------KSKISKPKITGSERIMYRYK----TRYSFTINKNSRIDITD--------------VKS---SPIIWKLMTVPSNYELELELINKIDI-----NTLESELLNVFMIIQ----------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 37.2823% 24 - C11 -2QY2 MCE_MIMIV A:[93-197] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQI---GEF-ITKFS----KASSNDISRY--IVSLDPSD--------D-----I-----EIVYKNRGSGKLIG--IDNWAITIKST--EEI--PLVA---------KISKPKITGSERIMYRYK----TRYSFTINKNSRIDITD--------------VKS---SPIIWKLMTVPSNYELELELINKIDI-----NTLESELLNVFMIIQD---------------------------------------------------------------------------------------------------------------
19 HHSearch 37.146% 32 - C10 -2HBW ? A:[21-70] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAALNLY-DS---PECT-S-L------------ATQAAVGRH-----LQVTSNQ-Q---GAA--VEVCLC-EDDYPGWLSL------------------
20 HHSearch 36.8016% 148 - C10 -3NPF ? A:[19-54] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVCNLR-EE---GKFT-SGM------------STQALLGMP-----VKVLQ---Y---NGW--YEIQTPDDYTGWVHRMV------------------