@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs1472: (2015-12-08 )
MLSRQNSKLIQAFIAIILFFSLGLVIKYWPDTVIAFDQNIQESVRGQLPNLSTRFFKLITVIGNTVSQIAIAIMSVTFCYLKKWYPQARFIAVNAIISGICILSLKLIFQRVRPTLTHLVFAGGYSFPSGHSMGTFMIFGSIIILLQYYMPKSIWKLLCQGILGLLIFLIGLSRIYLGVHFPTDVLAGFILAYGILNLTAYIFLAKDWLKKVK
Atome Classification :
(14 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-.....10........20.......-.30.-..---.....40---.........-----------50........60.-.......70---.----..-----..----...80........90--------........100.......110......--------------------------.120------.........130.......140..------..--------...150..-----------------.---------.-----------------------------------.....160-.......-170--....-------...180--.......190.......200-----.........210.-----------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLSR-
Q
N
S
K
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Q
A
F
I
A
I
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G
L
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Y-WPDT-V
I
---
A
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D
Q
N
I
----
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E
S
V
R
GQLP-----------N
L
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T
R
F
F
K
L
I
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V
I
-
G
N
T
V
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I
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I
---
A
----
I
M
-----
S
V
----
T
F
C
Y
L
K
K
WYPQ
A
R
F
I
--------
A
V
N
A
I
I
S
G
I
C
I
L
S
L
K
L
I
F
Q
R
V
R
P
T
L
T
H
--------------------------
L
V
--------
F
AGGYSFPSGHS
M
G
T
F
M
I
F
G
S
I
I
I
------
L
L
--------
Q
Y
YM--
P
K
-----------------
S
---------
I
-----------------------------------
W
K
L
L
C
Q
G
I
-
L
G
L
L
I
F
L
-
I
G
L
--
S
R
I
Y
-------LGVHF
P
--
T
D
V
L
A
G
F
I
L
A
Y
G
I
L
N
L
T
A
-------
Y
I
F
L
A
K
D
W
L
K
KVK-----------------------------------------
7
Fugue
83.30
15%
-138
- C6 -
1D2T
1
?
A:
[7-230]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
N
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-
T
T
T
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L
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P
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I
---
A
F
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----
A
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A
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A
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A
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G
----
A
F
-----
G
S
----
P
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--------
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A
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D
H
Y
M
R
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A
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Y
--------------------------
G
V
STCNTQDK
L
S
K
N
G
S
Y
P
S
G
H
T
S
I
G
W
A
T
A
L
V
L
A
E
------
I
N
---------------------------------------------------------------------------------
P
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Q
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A
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-------
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A
E
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A
Q
H
Q
K---------------------------------
11
Fugue
76.82
18%
-177
- C3 -
4B46
1
CETZ1_HALVD
A:
[1-367]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKLA
M
I
G
F
G
Q
A
G
G
K
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D
K
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NAGIVR
A
A
V
A
V
N
SA
K
A
D
L
L
G
LKNIPKDQ
R
V
L
I
GQSRVKGHGVGAD
N
E
L
G
A
E
I
A
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E
D
I
D
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A
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IPVHEVD
A
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T
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G
A
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-----
D
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L
L
---
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WRKT
G
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Q
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G
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D
-----------
E
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N
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R
F
G
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E
I
---
I
----
N
T
L
AGG
G
V
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----
T
V
G
Y
A
S
E
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V
T
A
H
T
T
N
--------
R
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A
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A
L
--------------------------
L
V
--------
L
A
G
----------------------------------------
P
--
P
E
-----------------
H
---------
L
-----------------------------------
N
R
K
G
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G
-
R
K
W
I
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--
M
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-------
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G
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Y
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A
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A
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-------
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V
A
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A
Q
D
-----------------------------------------
13
Fugue
72.29
14%
-141
* C6 *
1QI9
4
PRXV_ASCNO
A:
[2-556]
TCSTSDDADDPTPPNE
R
D
D
E
A
F
A
S
R
V
A
A
A
K
R
E
L
E
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T
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I
N
NGETDLAA
K
F
H
K
SLPHDDLGQVD
A
D
A
F
A
A
L
E
D
C
I
L
N
GD
L
S
I
C
E
D
VPVGNSEGDPVGRLVNPTAAFAIDISGPAFSA
T
T
I
P
PVPTLPS
P
E
L
A
A
Q
L
A
E
V
Y
W
M
A
L
A
RDVPFMQYGTD
D
I
T
V
T
A
A
A
N
L
A
G
MEGFPNLDA
V
S
I
G
SDGTVDPLSQLFRATFVGVETGPFISQLLV
N
S
F
T
I
DS
I
T
V
E
PKQE
T
F
A
P
DVNYMVD
F
D
E
W
L
N
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Q
N
GGPPAGPELLDD
E
L
R
F
VRN
A
R
D
L
A
R
V
T
F
T
DNIN
T
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A
Y
R
G
A
L
I
L
L
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L
DAFNRAGVN
G
P
F
I
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Q
A
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VNFG
I
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A
A
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-
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A
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A
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G
G
T
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F
D
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-
L
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E
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R
V
----
A
A
I
N
A
A
Q
N
P
-----------
N
N
E
V
T
Y
L
--------------------------------
L
----
P
Q
A
I
Q
E
G
S
P
T
H
P
S
Y
P
--------
S
G
H
A
T
Q
N
G
A
F
A
T
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L
K
A
L
I
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L
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R
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G
D
C
--------------------------------------
Y
P
D
P
V
Y
P
D
D
D
G
L
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L
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D
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R
G
S
-------------------------------------------------------------------------------------------
C
L
T
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G
E
-
I
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N
-
V
A
F
--
G
R
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M
-------
L
G
I
H
Y
R
--
F
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L
L
L
G
E
T
I
----
T
-------
V
R
T
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H
Q
E
L
M
T
F
A
E
E
S
T
F
E
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L
FT
G
E
V
I
K
L
F
QDG
T
F
T
I
DGFKCPGLVYTGVENCV
12
Fugue
69.94
16%
-141
- C1 -
4H1X
2
PSTS2_STRPN
A:
[9-265]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
T
I
E
V
I
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G
S
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T
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AN
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P
L
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--------
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D
N
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F
I
--------------------------
E
A
--------
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H
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E
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L
A
--------
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A
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K
--
K
E
N
PE
V
-------------
T
---------
I
-----------------------------------
D
I
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S
S
-
A
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--
A
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M
------
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--
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E
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N
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S
M
A
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L
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S
GKLTTWDKIK----------------------
15
Fugue
68.39
14%
-161
* C5 *
3NDH
10
?
A:
[5-225]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
H
H
H
-
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F
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H
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---------------------------
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----
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R
L
P
-----------
Y
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A
-
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K
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---
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E
-----
R
I
----
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E
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N
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TDLPITEP
E
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-
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-
E
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A
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--------------------------
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--------
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-
A
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A
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P
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I
--
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-----------------
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---------
V
-----------------------------------
Q
Q
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E
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K
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L
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EWKKTN
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N
A
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D
L
W
S
EG---------------------------------------
2
HHSearch
65.22
19%
-124
- C6 -
1D2T
1
?
A:
[108-214]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
A
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R
S
A
K
D
H
Y
M
R
I
R
P
F
A
F
Y
GVSTCNTQ------------------
D
K
--------
L
S
K
N
G
S
Y
P
S
G
H
T
S
I
G
W
A
T
A
L
V
L
A
E
------
I
N
--------
P
Q
R
Q
---------------------------------------------------------------------
N
----
E
-
I
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G
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--
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I
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A
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H
-------
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A
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Q
Q
L
Q
K
A
K
-----------------------------------------
16
Fugue
65.07
13%
-213
- C5 -
1FJG
-
RS5_THET8
E:
[5-154]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
E
E
K
M
I
L
I
R
R
--------------------------
T
----
A
R
M
Q
A
G
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R
R
-----------
F
R
----
F
G
A
L
V
V
V
-
G
D
R
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---
G
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-----
K
A
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E
------------------------------
V
P
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A
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K
A
G
Y
Y
A
R
R
N
M
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E
--------------------------
V
P
--------
L
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N
G
-
T
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E
----
I
E
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E
F
G
A
S
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------
V
L
--------
K
P
A
A
--
P
G
-----------------
T
----------------------------------------------
G
V
I
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P
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P
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A
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M
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R
Q
L
R
-------
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K
A
D
V
E
R
L
R
K
G
-------------------------------------------
9
Fugue
60.18
16%
-205
- C2 -
1L1N
-
?
A:
[1-180]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPGFDY
A
V
A
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A
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----
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--
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-----------
E
I
L
----
D
A
K
A
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E
-
D
Q
A
G
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N
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E
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---
T
----
I
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-----
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L
KRNE
K
F
R
D
I
R
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H
I
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--
Q
I
--------
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--
E
T
N
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-
Y
P
N
M
Y
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P
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G
A
--------------------------
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--------
E
Q
G
Y
L
N
L
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----------
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Q
T
A
R
------
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L
--------
M
Y
N
F
--
P
T
-----------------
R
--------------------------------------------------
A
G
Q
-
C
G
G
V
I
T
C
T------
G
K
V
-------
I
G
M
H
V
G
--
G
N
G
S
H
G
F
A
A
A
------------------
L
K
R
S
Y
F
T
--------------------------------------------
3
HHSearch
58.00
18%
-113
- C6 -
1QI9
4
PRXV_ASCNO
A:
[391-512]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
P
N
N
E
V
T
Y
L
L
P
Q
A
I
Q
----------------------------
E
G
--------
S
P
T
H
P
S
Y
P
S
G
H
A
T
Q
N
G
A
F
A
T
V
L
K
A
------
L
I
--------
G
L
D
R
--
G
G
DCYPD
P
V
Y
P
D
-------
D
DGL
K
L
I
D
F
R
G
-----------------------------------
S
C
L
T
F
E
G
E
-
I
N
K
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-
V
A
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--
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R
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M
-------
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G
I
H
Y
R
--
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D
G
I
Q
G
L
L
L
G
E
T
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T
V
R
T
L
-------
H
Q
E
L
M
T
F
A
E
E
S
T
F
-----------------------------------------
4
HHSearch
56.06
21%
-92
- C6 -
3BB0
1
PRXC_CURIN
A:
[336-513]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
L
V
--------
D
V
A
C
T
D
A
G
I
F
S
W
K
E
K
W
E
F
E
F
W
R
P
L
S
G
V
R
D
DGRPDHGDPFWLTLGAPATNTNDI
P
F
--------
K
P
P
F
P
A
Y
P
S
G
H
A
T
F
G
G
A
V
F
Q
M
V
R
R
------
Y
Y
--------
N
G
R
V
--
G
T
W
K
DDEP-----------
D
NI-------
A
IDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVR
T
R
I
V
R
H
F
D
S
-
A
W
E
L
M
F
E
-
N
A
I
--
S
R
I
F
-------
L
G
V
H
W
R
--
F
D
A
A
A
A
R
D
I
L
I
P
T
T
T
K
D
V
-------
Y
A
V
D
N
N
G
A
T
V
F
Q
N
-----------------------------------------
10
Fugue
47.05
12%
-124
- C4 -
3DHW
-
METI_ECOLI
A:
[6-208]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
W
L
L
V
R
G
V
W
E
T
L
A
M
T
F
V
S
G
F
F
G
F
-
V
I
G
L
-
P
V
---
G
V
L
L
Y
V
----
T
R
P
G
Q
I
I
A
N
-----------
A
K
L
Y
R
T
V
S
A
I
V
N
I
-
F
R
S
I
P
F
I
I
L
---
L
----
V
W
-----
M
I
----
P
F
T
R
V
I
V
G
T
S
I
G
L
Q
A
--------
A
I
V
P
L
T
V
G
A
A
P
F
I
A
R
M
V
E
N
A
L
L
E
I
P
T
G
--------------------------
L
I
---------------
E
A
S
R
A
M
G
A
----
T
P
M
Q
I
------
V
R
--------
K
V
L
L
--
P
E
-----------------
A
---------
L
-----------------------------------
P
G
L
V
-
N
A
A
-
T
I
T
L
I
T
L
-
V
G
Y
--
S
A
M
G
GAVGAGG
L
G
Q
I
G
Y
--
Q
Y
G
Y
I
G
Y
N
A
T
V
M
N
T
V
L
V
L
-------
L
V
I
L
V
Y
L
I
Q
F
A
G
D
-----------------------------------------
5
HHSearch
42.96
18%
-120
- C6 -
1UP8
2
PRXV_CORPI
A:
[477-576]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
P
F
H
P
S
Y
G
S
G
H
A
V
V
A
G
A
C
V
T
I
L
K
A
------
F
F
--------
D
S
G
I
--
E
I
D
Q
V
F
E
V
D
KDED
K
L
V
K
S
S
F
---------
K
-----------------------------------
G
T
L
T
V
A
G
E
-
L
N
K
L
A
D
N
-
I
A
I
--
G
R
N
M
-------
A
G
V
H
Y
F
--
S
D
Q
F
E
S
L
L
L
G
E
Q
V
A
I
G
I
L
-------
E
E
Q
S
L
T
Y
G
E
N
F
F
F
-----------------------------------------
1
PsiBlast_PDB
41.18
25%
-131
- C6 -
4PX7
1
?
A:
[149-229]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
H
--------------------------
W
Q
--------
K
E
T
G
F
A
F
P
S
G
H
T
M
-----
F
A
A
S
W
A
------
L
L
--------
A
V
G
L
LW
P
R
-----------------
R
----------------------------------------------
R
T
L
T
I
A
I
-
L
--
L
V
W
A
-
T
G
V
M
G
S
R
L
L
-------
L
G
M
H
W
P
--
R
D
L
V
V
A
T
L
I
S
W
A
L
V
A
V
A
T
-------
W
L
A
Q
R
I
C
G
P
L
T
P
P
-----------------------------------------
6
HHSearch
17.59
11%
84
- C6 -
1Z65
-
PRND_MOUSE
A:
[1-19]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
N
-
R
L
G
T
W
W
V
A
I
L
C
M
L
L
A
S
H
L
S
T
V
K
A
R
-
G
I
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------