@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1578: (2015-12-09 )
MAKKSKNLRAALEKIDSTKAYSVEEAVALAKETNFAKFDATVEVSYNLNIDVKKADQQIRGAMVLPAGTGKTSRVLVFARGAKAEEAKAAGADFVGEDDLVAKIQGGWLDFDVVIATPDMMALVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGKITYRADKAGNVQALIGKVSFDDAKLVDNFKAFNDVIVKAKPATAKGTYITNLSITTTQGVGIKVDPNSL

Atome Classification :

(20 SA) .........10........20........30---.-.---....---..40.......-.50........60........70........80........90........100------..--.-....110.......120...-.-...130.......140...--....150.......160.......170.......180.......190.......200.....-.-.210.......220.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MAKKSKNLRAALEKIDSTKAYSVEEAVALAK---E-T---NFAK---FDATVEVSYNL-NIDVKKADQQIRGAMVLPAGTGKTSRVLVFARGAKAEEAKAAGADFVGEDDLVA------KI--Q-GGWLDFDVVIATPDMMALVG-R-LGRVLGPRNLMPNPKTGTV--TMDVAKAVEESKGGKITYRADKAGNVQALIGKVSFDDAKLVDNFKAFNDVIVKAKPATAKGT-Y-ITNLSITTTQGVGIKVDPNSL
36 HHSearch 94.0549% -96 - C4 -3QOY RL1_AQUAE A:[1-232] MARRGKKYIEASKLVDRNKRYTLEEAVDLLK---K-MEEVLQRR---FDETVELAMRL-NVDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELIN------KI--LKEEWTDFDVAIATPEMMPKVA-K-LGRILGPRGLMPSPKTGTV--TTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQ-Y-IKNMAVSLTMSPSVKLDINEV
14 PsiBlast_PDB 93.6648% -99 - C4 -3QOY RL1_AQUAE A:[1-233] MARRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEE-V---LQRR---FDETVELAMRL-NVDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELIN------KIL-K-EEWTDFDVAIATPEMMPKVA-K-LGRILGPRGLMPSPKTGTV--TTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQ-Y-IKNMAVSLTMSPSVKLDINEV
12 PsiBlast_PDB 93.0548% -97 - C4 -4QG3 RL1_THETH A:[2-228] --KHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-
4 PsiBlast_PDB 92.3548% -92 - C4 -4QVI RL1_THETH A:[1-229] MPKHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTLGPSVRINPHS-
10 PsiBlast_PDB 91.6548% -92 - C4 -3UMY RL1_THETH A:[2-228] --KHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTAMGPSVRINPHS-
13 PsiBlast_PDB 91.5148% -96 - C4 -1ZHO RL1_THETH A:[2-228] --KHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
15 PsiBlast_PDB 91.4347% -95 - C4 -2HW8 RL1_THETH A:[2-228] --KHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-MGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
46 Fugue 91.4149%-109 - C4 -487D - RL1_ECOLI H:[1-224] -----KRYRALLEKVDPNKIYTIDEAAHLVK---ELA----TAK---FDETVEVHAKLG-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KILD---GWMDFDAVVATPDVMGAVG-SKLGRILGPRGLLPNPKAGTVGF--NIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKG-TF-LRSVYVTTTMGPSVRINPHS-
5 PsiBlast_PDB 91.3348% -94 - C4 -3U56 RL1_THETH A:[2-229] -PKHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTVMGPSVRINPHS-
2 PsiBlast_PDB 91.2248% -92 - C4 -3U4M RL1_THETH A:[2-229] -PKHGKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
6 PsiBlast_PDB 90.9148% -99 - C4 -4REO RL1_THETH A:[9-229] --------RALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTVMGPSVRINPHS-
7 PsiBlast_PDB 90.8848% -95 - C4 -4F9T RL1_THETH A:[2-229] -PKHG--YRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTAMGPSVRINPHS-
8 PsiBlast_PDB 90.2248%-100 - C4 -1AD2 RL1_THETH A:[5-228] -----KRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
11 PsiBlast_PDB 89.6448%-100 - C4 -487D - RL1_ECOLI H:[1-224] -----KRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
9 PsiBlast_PDB 89.6148%-103 - C4 -3TG8 RL1_THET8 A:[15-228] --------------VDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIK-GRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
17 PsiBlast_PDB 86.6647% -91 - C4 -4QGB RL1_THETH A:[1-216] -------------KVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-
16 PsiBlast_PDB 86.5954% -79 - C4 -3J5S - RL1_ECOLI F:[1-229] MAKLTKRMRVIREKVDATKQYDINEAIALLK---E-L---ATAK---FVESVDVAVNL-GIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD------QI--K-KGEMNFDVVIASPDAMRVVG-Q-LGQVLGPRGLMPNPKVGTV--TPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGV-Y-IKKVSISTTMGAGVAVDQAGL
21 PsiBlast_CBE 85.3247% -93 - C4 -4QGB RL1_THETH B:[1-216] -------------KVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQ------KI--L-DGWMDFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-
40 HHSearch 83.8445% -91 * C4 *2OV7 - RL1_THETH A:[4-227] ----GKRYRALLEKVDPNKIYTIDEAAHLVK---E-L---ATAK---FDETVEVHAKL-GIDPRRSDQNVRGTVSLPHG-------------------------------------------------------------------------------------------------------GRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-
18 PsiBlast_PDB 70.1830% -74 - C4 -4LQ4 RL1_METJA A:[9-211] ---------------------AVKEARELAK---P-R---NFTQSFEFIATLK------EIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKEEIEELGKNKRKL--R-KIAKAHDFFIAQADLMPLIG-RYMGVILGPRGKMPKPVPANA----NIKPLVERLKKTVVINTRDKP-YFQVLVGNEKMTDEQIVDNIEAVLNVVAK---KYEKGL-YHIKDAYVKLTMGPAVKV-----