@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1708: (2015-12-10 )
MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI

Atome Classification :

(20 SA) ---.........10........20........30........40........50........60..-......-70........80----.-----.....--.--.--90-.......--..100....------...110.....-..120.......130.......140.......150-.....--..160------------....---------.-------------....170.......180.-----......-190........200...---------------------------------------------------------....210--........220.-------......230.....----..240-.......250.-...-...--260.......270........280.......290....-...300----.....-...-310...------....320.......330........340.......350.......360.......370-----------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFL-KLLHEV-GDSDALVVNVID----I-----FDFNG--S--I--I--PGLSRFV--AGNDVLLVG------NKKDILPKSVK-DGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKD-LIDTI--EKY--------------RHGR---------D-------------VYVVGVTNVGKSTLINAI-----IREITG-S-RDVITTSRFPGTTLD---------------------------------------------------------KIEIPL---DDGSYIFDTPGI-------IHRHQMAHYLTAKN----LKYVS-PKKEIKPKTYQ-LNS-EQT--LFLAGLARFDF-ISGQKQGFTAYFDNNLNLHRTKLVGA-DEFYT-----KHVGK-LLT-PPTGKE------VSDFPKLVRHEFTIKN-KMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI-----------------------
56 HHSearch 95.7257%-121 - C7 -3H2Y ? A:[56-368] -------------------------------------------------------------DDDFL-RILNGI-GKSDALVVKIVD----I-----FDFNG--S--W--L--PGLHRFV--GNNKVLLVG------NKADLIPKSVK-HDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAE-LADAI--EYY--------------RGGK---------D-------------VYVVGCTNVGKSTFINRM-----IKEFSD-ETENVITTSHFP----D---------------------------------------------------------LIDIPL---DEESSLYDTPGI-------INHHQMAHYVGKQS----LKLIT-PTKEIKPMVFQ-LNE-EQT--LFFSGLARFDY-VSGGRRAFTCHFSNRLTIHRTKLEKA-DELYK-----NHAGD-LLS-PPTPEE------LENMPELVKYEFNIREPKTDVVFSGLGWVTVNEP---GAKIVAHVPKGVSVSLRKSLI-----------------------
1 PsiBlast_PDB 95.5956%-121 - C7 -3H2Y ? A:[56-368] -------------------------------------------------------------DDDFL-RILNGI-GKSDALVVKIVD----I-----FDFNG--S--W--L--PGLHRFV--GNNKVLLVG------NKADLIPKSVK-HDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAE-LADAI--EYY--------------RGGK---------D-------------VYVVGCTNVGKSTFINRM-----IKEFSDET-ENVITTSHFP----D---------------------------------------------------------LIDIPL---DEESSLYDTPGI-------INHHQMAHYVGKQS----LKLIT-PTKEIKPMVFQ-LNE-EQT--LFFSGLARFDY-VSGGRRAFTCHFSNRLTIHRTKLEKA-DELYK-----NHAGD-LLS-PPTPEE------LENMPELVKYEFNIREPKTDVVFSGLGWVTVN---EPGAKIVAHVPKGVSVSLRKSLI-----------------------
55 HHSearch 93.8855%-114 - C7 -3EC1 ? A:[59-369] --------------------------------------------------------------DDFL-SMLHRI-GESKALVVNIVD----I-----FDFNG--S--F--I--PGLPRFA--ADNPILLVG------NKADLLPRSVK-YPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAK-VMEAI--NRY--------------REGG---------D-------------VYVVGCTNVGKSTFINRI-----IEEATG-K-GNVITTSYFPGTTLD---------------------------------------------------------MIEIPL---ESGATLYDTPGI-------INHHQMAHFVDARD----LKIIT-PKREIHPRVYQ-LNE-GQT--LFFGGLARLDY-IKGGRRSFVCYMANELTVHRTKLEKA-DSLYA-----NQLGE-LLS-PPSKRY------AAEFPPLVPRSLSVKERKTDIVFSGLGWVTCNDP---GAQLVVHAPKGVDVFIRQSLI-----------------------
78 Fugue 93.2854%-114 - C7 -3EC1 ? A:[59-369] --------------------------------------------------------------DDFL-SMLHRI-GESKALVVNIVD----I-----FDFNG--S--F--I--PGLPRFA--ADNPILLVG------NKADLLPRSVK-YPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAK-VMEAI--NRY--------------REGG---------D-------------VYVVGCTNVGKSTFINRI-----IEEATG-K-GNVITTSYFPGTTLD---------------------------------------------------------MIEIPL---ESGATLYDTPGI-------INHHQMAHFVDARD----LKIIT-PKREIHPRVYQ-LNE-GQT--LFFGGLARLDY-IKGGRRSFVCYMANELTVHRTKLEKA-DSLYA-----NQLGE-LLS-PPSKRY------AAEFPPLVPRSLSVKERKTDIVFSGLGWVTCND---PGAQLVVHAPKGVDVFIRQSLI-----------------------
21 PsiBlast_CBE 93.1154%-109 - C7 -3EC1 ? B:[59-369] --------------------------------------------------------------DDFL-SMLHRI-GESKALVVNIVD----I-----FDFNG--S--F--I--PGLPRFA--ADNPILLVG------NKADLLPRSVK-YPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAK-VMEAI--NRY--------------REGG---------D-------------VYVVGCTNVGKSTFINRI-----IEEATG-K-GNVITTSYFPGTTLD---------------------------------------------------------MIEIPL---ESGATLYDTPGI-------INHHQMAHFVDARD----LKIIT-PKREIHPRVYQ-LNE-GQT--LFFGGLARLDY-IKGGRRSFVCYMANELTVHRTKLEKA-DSLYA-----NQLGE-LLS-PPSKRY------AAEFPPLVPRSLSVKERKTDIVFSGLGWVTCNDPGAQLVV---HAPKGVDVFIRQSLI-----------------------
2 PsiBlast_PDB 92.3754%-108 - C7 -3EC1 ? A:[59-369] --------------------------------------------------------------DDFL-SMLHRI-GESKALVVNIVD----I-----FDFNG--S--F--I--PGLPRFA--ADNPILLVG------NKADLLPRSVK-YPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAK-VMEAI--NRY--------------REGG---------D-------------VYVVGCTNVGKSTFINRI-----IEEATG-K-GNVITTSYFPGTTLD---------------------------------------------------------MIEIPL---ESGATLYDTPGI-------INHHQMAHFVDARD----LKIIT-PKREIHPRVYQ-LNE-GQT--LFFGGLARLDY-IKGGRRSFVCYMANELTVHRTKLEKA-DSLYA-----NQLGE-LLS-PPSKRY------AAEFPPLVPRSLSVKERKTDIVFSGLGWVTCNDPGAQLVV---HAPKGVDVFIRQSLI-----------------------
59 HHSearch 55.8721%-135 * C7 *1PUJ RBGA_BACSU A:[16-179] --------------------------------------------------------------------EVTEK-LKLIDIVYELVD----A-----RIPMS--S--R--N--PMIEDIL--KNKPRIMLL------NKADKADAAV-----TQQWKE-HFENQ---GIRSLSINSVNGQGLNQ-IVPAS--KEILQEKFDRMRAKGVKPRAI---------R-------------ALIIGIPNVGKSTLINRL-----AKK-------NIA---------------------------------------------------------------------QWVKV---GKELELLDTPGI-------LWPKFEDELVGLRL----AVTGA-IKDSIINLQDV-AVF-GLR--FLEEHYPERLK-ERYGLDEIPEDIAELFDAIGEKRGCL-MSGGL-----INYDK-TTE-VIIRDI------RTEKFGRLSFEQPT-------------------------------------------------------------------
62 HHSearch 51.6923% -89 - C7 -1U0L RSGA_THEMA A:[80-235] -----------------------------------------------------------------------PH-VANVDQVILVVT----V-----KMPET--S--TYII--DKFLVLAEKNELETVMVI------NKMDLYDEDD--LRKVRELEEIYS-----GLYPIVKTSAKTGMGIEE-LKEYL--KG------------------K---------I-------------STMAGLSGVGKSSLLNAI-----NPGLKL-R------------TTTT---------------------------------------------------------AQLLKF---DFGGYVVDTPGF-------ANLEINDIEPEELK----HYFKE-FGDKQCFFSDC-NHV-DEP--ECGVKEAVENG-EIAESRYENYVKMFYELLGRR-----------------------------------------------------------------------------------------------------------------------
58 HHSearch 49.1323% -87 - C7 -2YV5 RSGA_AQUAE A:[74-230] ----------------------------------------------------------------------RPK-VANVDRVIIVET----L-----KMPEFNNY--L--L--DNMLVVYEYFKVEPVIVF------NKIDLLNEEE--KKELERWISIY-RDA---GYDVLKVSAKTGEGIDE-LVDYL--E------------------GF---------I-------------CILAGPSGVGKSSILSRL-----TGEELR-TQEV---------TTTG---------------------------------------------------------VRLIPF---GKGSFVGDTPGF-------SKVEATMFVKPREV----RNYFR-EFLRYQCKYPD-CTH-TNE--PGCAVKEAVKN-GEISCERYKSYLKIIKVYLEEIKELC-RED--------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 47.7627% -78 - C7 -1PUJ RBGA_BACSU A:[21-176] ---------------------------------------------------------------------------------LKLID----IV----YELVD--A--R--I--PMSSRNP--MIEDILKNK------PRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVP-ASKEILQEKF--------------DRMRAKGVKPRAIR-------------ALIIGIPNVGKSTLINRL----------A-K-KNIA---------------------------------------------------------------------QWVKV---GKELELLDTPGI-------LWPKFEDELVGLRL----AVTGA-IKDSIINLQDV-AVF-GLR--FLEEHYPERLK-ERYGLDEIPEDIAELFDAIGEKRGCL-MSGGL-----INYDK-TTE-VIIRDI------RTEKFGRLSFEQPT-------------------------------------------------------------------
60 HHSearch 47.4624% -92 - C7 -3CNL RBGA_THEMA A:[18-158] ------------------------------------------------------------------------L-LRLVNTVVEVRD----A-----RAPFA--T--S--A--YGVD--F--SRKETIILL------NKVDIADEKT-----TKKWVEFF-KK-----QGKRVITTHKGEPRKV-LLKKL--SF---------------DRLA---------R-------------VLIVGVPNTGKSTIINKL-----KGK-------RA----------KG---------------------------------------------------------IQWFSL---ENGVKILDTPGI-------LYKNIFSEDLAAKL----LLVGS-LPVERIEDQRI-FER-AFE--IFARSIGIESS-FSEFFEDFARKRGLLKKGGVPDIERA-LMLFF-----TEVAQ-GKA-GRVSFE------RPEDI----------------------------------------------------------------------------
64 HHSearch 44.5720% -83 - C7 -2RCN RSGA_SALTY A:[128-282] --------------------------------------------------------------------------AANIDQIV-IVS----A-----ILPEL--S--L--NIIDRYLVGCETLQVEPLIVL------NKIDLLDDEG--MDFVNEQMDIY-RNI---GYRVLMVSSHTQDGLKP-LEEAL--T------------------GR---------I-------------SIFAGQSGVGKSSLLNAL-----LGLQNE-I--LTN---------TA---------------------------------------------------------ARLYHF---PHGGDVIDSPGV-------REFGLWHLEPEQIT----QGFVE-FHDYLGHCKYR-DCK-HDA--DPGCAIREAVE-NGAIAETRFENYHRILESMA------------------------------------------------------------------------------------------------------------------------
80 Fugue 43.4619% -43 * C9 *4N5H ? X:[1-315] MADEEAMLAKVQASWAQTAARDKARYADERVPE------DVHWETEYRYEQSAD-------PQQTL-NLYYPA-KRRNATMPTVID----IHGGGWFYGDR--N--L--N--RNYCRYL--ASQGYAVMGMGYRLLPDVDLRGQIQD-IFASLRWLSHFGPQRGFDLDHVLLTGDSAGGHLAS-LVACI--QQS--------------AELQ---------E-------------LF--GVSRVNFNFTLVAL-----V-----------------------------------------------------------------------------------CPV---AEPSKLPEAAG------------DMSDMAAFYL----DKLSG-GDQALVD---H-LNF-SQV--VKGLDLPPFML-IGGQNDSF--------YLQSQALLKVFDANHV-----TYTTK-LWP-ASAGPH------L-------KHVFNVQH-----------WEWPESIETNLEMLRTFDALSKQQDQAEENE-----------------------
81 Fugue 41.9816% -56 - C4 -1MKY DER_THEMA A:[2-439] ----ATVLIVG---RPNVGKSTLFNKLVKDPVQDTVEWYG----KTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGI-----TKEDE--S--L--A--DFLRKS----TVDTILVA------NKAENLREFER-E------VKPELYSLGFGEPIPV--SAEHNINLDTMLETII--KKL--------------EEKG---------LDLESKPEITDAIKVAIVGRPNVGKSTLFNAI-----LNK-------ERALVSPIPVDDEV---------------------------------------------------------FID------GRKYVFVDTAGL-------EKYSNYRVVDSIEKADVVVIVLD-ATQGITRQDQRMAGLMERRGRASVVVFNKWDL-VVHREKR-YDEFTKLFREKLYFIDYS-PLIFTSADKGWNIDRMIDAMNLAYASYTTKVPSSAINSALQKVLAFTN-LPRGL--KIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR
61 HHSearch 41.7922% -79 - C7 -1T9H RSGA_BACSU A:[83-238] ------------------------------------------------------------------------P-ICNVDQAVLVFS----A-----VQPSF--STAL--L--DRFLVLVEANDIQPIICI------TKMDLIEDQDT-EDTIQAYAEDYR-NI---GYDVYLTSSKDQDSLAD-IIPHF--Q------------------DK---------T-------------TVFAGQSGVGKSSLLNAI-----SP-------------------TRH---------------------------------------------------------VELIHT----SGGLVADTPGF-------SSLEFTDIEEEELG----YTFPD-IREKSSSCKFR-GCL-HLK--EPKCAVKQAVE-DGELKQYRYDHYVEFMTEIKDRKPRY------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 41.2829% -91 - C6 -1U0L RSGA_THEMA A:[145-248] -------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYPI--VKTSAKTGMGIEE-L------KEY--------------LKGK---------I-------------STMAGLSGVGKSSLLNAINPGLKLR----------------TTTTAQ---------------------------------------------------------LLK--F---DFGGYVVDTPGFANLEINDIEPEELKHYFKEFG----DKQCF-FSDCNHVDEPE-CGV-KEA--VENGEIAESRY-ENYVKMFYELLGRR------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 40.9327% -52 - C6 -3CNO RBGA_THEMA A:[47-208] ---------------------------------------------------------------------------------------------------------------------------KETIILL------NKVDI-----A-DEKTTKKWVEFFKKQGKR-----VITTHKGEPRKV-LLKKL--SFD--------------RLAR-----------------------VLIVGVPNTGKSTIIN---------KLKG-K-RA------------G---------------------------------------------------------IQWFSL---ENGVKILDTPGI-------LYKNIFSEDLAAKL----LLVGSLPVERIE----------DQR--IFERAFEIFAR-SIGIESSFSEFFEDFARKRGLLKKGG-VPDIE-----RALML-FFT-EVAQGK------AGRVSFERPED----------------------------------------------------------------------
4 PsiBlast_PDB 40.4827% -51 - C6 -3CNN RBGA_THEMA A:[47-208] ---------------------------------------------------------------------------------------------------------------------------KETIILL------NKVDI-----A-DEKTTKKWVEFFKKQGKR-----VITTHKGEPRKV-LLKKL--SFD--------------RLAR-----------------------VLIVGVPNTGKSTIIN---------KLKG-K-RA------------G---------------------------------------------------------IQWFSL---ENGVKILDTPGI-------LYKNIFSEDLAAKL----LLVGSLPVERIE----------DQR--IFERAFEIFAR-SIGIESSFSEFFEDFARKRGLLKKGG-VPDIE-----RALML-FFT-EVAQGK------AGRVSFERPED----------------------------------------------------------------------
73 HHSearch 40.4126% -50 - C6 -2J69 - BDLP_NOSP7 A:[68-244] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVF---------R-------------LLVLGDMKRGKSTFLNAL-----IGEN-------LLPSDVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSPGL-------NDTEARN-ELS-------LGYV----NNCHAILFV-MRA-SQP--CTLGERRYLENYIKG-RGLTVFFLVNAWDQVRESLIDP-DDVEE-----LQASE-NRL-RQVFNA------NLAEYCTVEGQNIYDE-RVFELSSIQALRRRLKNPQADLDGTGFPKFMDSLNTFLTRE-----------------------
3 PsiBlast_PDB 40.4027% -49 - C6 -3CNL RBGA_THEMA A:[47-208] ---------------------------------------------------------------------------------------------------------------------------KETIILL------NKVDI-----A-DEKTTKKWVEFFKKQGKR-----VITTHKGEPRKV-LLKKL--SFD--------------RLAR-----------------------VLIVGVPNTGKSTIIN---------KLKG-K-RA-----------KG---------------------------------------------------------IQWFSL---ENGVKILDTPGI-------LYKNIFSEDLAAKL----LLVGSLPVERIE----------DQR--IFERAFEIFAR-SIGIESSFSEFFEDFARKRGLLKKGG-VPDIE-----RALML-FFT-EVAQGK------AGRVSFERPEDI---------------------------------------------------------------------