@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs2067: (2015-12-13 )
MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR
Atome Classification :
(20 SA)
-----------------------------.........10........--20.....---..-.30........40-........------.50........60..------......70......--..80.....---...90.-----........100....----.-..110..------------------.....120...---...-----.130..--....--.140.......----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------MS
N
K
V
Q
E
R
R
E
R
K
I
K
E
A
I
KA--K
N
W
D
E
V
T
---
R
L
-
L
Q
Q
E
QS
N
A
E
R
R
D
--
R
Y
HNRRIK------DETIASKNAKK
S
V
R
Y
------
D
V
I
ASSDL
N
P
E
E
A
L
--
I
L
E
E
L
R
Q
A
I
---
R
E
A
K
-
A
-----
S
L
S
E
I
D
S
K
I
V
E
M
I
A
E----Q-GS
S
Y
K
E
T
------------------
A
R
Y
I
T
E
H
Y
K
K
M
---
S
D
V
-----
T
V
K
S
H
Y
--
C
K
A
L
--
K
K
L
A
P
L
L
K
AYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54
Fugue
75.62
20%
-30
- C2 -
4ATG
2
?
A:
[1-195]
--------------------------GSH
M
L
P
K
E
L
Q
L
Y
F
D
K
I
L
S
M
I
K
S
--
D
M
K
D
I
A
I
---
E
C
-
L
E
K
E
-
S
G
L
Q
Q
L
V
--
P
Y
F
I
Q
H
I
S
------
E
L
I
L
K
S
F
K
E
A
E
V
L
K
T
C
I
A
L
Y
F
S
L
I
K
N
K
H
V
F
I
D
P
Y
L
H
Q
I
L
P
S
L
L
T
C
V
IGK
S
I
V
D
-
D
-----
D
V
R
K
M
S
A
D
I
V
K
Y
I
Y
D
----
T
Y
S
R
S
Y
K
T
L
------------------
A
P
R
V
L
K
T
L
K
G
V
W
M
D
P
N
R
-----
S
E
D
S
Q
Y
G
A
L
Y
C
L
--
S
I
L
S
K
N
V
V
N
T
V
IREH
A
E
E
Y
K
R
T
IGK
K
K
V
T
N
L
L
D
N
V
L
N
V-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
75.39
28%
-48
- C2 -
1RP3
-
?
A:
[164-234]
------------------------------------------------------------------------------------------------------------------------
N
V
E
E
E
V
--
I
K
R
E
L
T
E
K
V
---
K
E
A
V
-
S
-----
K
L
P
E
R
E
K
L
V
I
Q
L
I
F
Y
----
E
-
E
L
P
A
K
E
----------------------
V
A
-
K
I
L
E
T
---
S
V
S
-----
R
V
S
Q
L
K
--
A
K
A
L
--
E
R
L
R
E
M
L
S
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
70.59
18%
10
- C2 -
2WWX
-
DRRA_LEGPH
B:
[334-533]
-------------------------------
E
L
G
V
Q
R
V
T
R
I
E
N
L
E
N
A
K
--
K
L
W
D
N
A
N
---
S
M
-
L
E
K
G
N
I
S
G
Y
L
K
A
--
A
N
E
L
H
K
F
M
------
K
E
----
K
N
L
K
E
D
D
L
R
------
P
E
L
S
D
K
T
I
S
P
K
G
Y
A
--
I
L
Q
S
L
W
G
A
A
---
S
D
Y
S
-
R
A
A
ATL
T
E
S
T
V
E
P
G
L
V
S
A
V
N
K
----
M
-
S
A
F
F
M
D
C
K
L
SPNERATPDPDFKVG
K
S
K
I
L
V
G
I
M
Q
F
I
---
K
D
V
ADPTS
K
I
W
M
H
N
--
T
K
A
L
M
N
H
K
I
A
A
I
Q
K
L
E
R
S
NNVN
D
E
T
L
E
S
V
L
S
SKGENLS
E
Y
L
S
YK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
70.56
22%
-42
- C2 -
3HUG
1
SIGL_MYCTU
A:
[17-88]
------------------------------------------------------------------------------------------------------------------------
S
T
P
D
E
V
--
N
A
A
L
D
R
L
L
I
---
A
D
A
L
-
A
-----
Q
L
S
A
E
H
R
A
V
I
Q
R
S
Y
Y
----
R
-
G
W
S
T
A
Q
----------------------
I
A
-
T
D
L
G
I
---
A
E
G
-----
T
V
K
S
R
L
--
H
Y
A
V
--
R
A
L
R
L
T
L
Q
E
L
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
67.55
18%
-30
- C3 -
4NNB
2
?
A:
[4-527]
T
S
L
Y
I
T
A
A
P
I
GA
V
P
K
F
L
DPFEATFIP
S
F
L
L
E
G
F
F
D
A
D
R
C
A
S
I
A
A
D
L
K
T
--
D
G
W
E
V
V
P
A
G
G
R
L
-
L
Q
V
G
H
--
A
Q
P
I
A
--
H
F
P
K
P
W
L
A
A
L
----
S
N
K
L
A
R
R
I
V
L
Q
L
T
T
Y
------
G
W
I
V
S
E
Q
G
D
----
L
--
L
W
E
H
E
R
-----------------
Q
H
H
Y
L
P
P
A
L
I
E
A
I
E
K
----
E
-
S
-------------------------
P
A
L
L
K
N
M
E
E
A
---
G
W
I
-----
A
C
A
A
G
Y
--
W
Q
A
G
--
K
A
R
S
P
Y
L
P
I
T
P
E
A
I
T
E
E
T
I
R
S
M
R
A
GAA
V
V
H
L
H
T
R
D
LSD
R
R
R
I
E
I
P
GL
G
V
V
T
V
G
SQRNQIV
L
D
D
Y
D
A
I
V
P
M
V
K
K
R
EPA
A
I
L
N
L
S
TSVRGDRHGARSKLRRAHLKFYDDVGSAPE
V
A
S
L
S
P
A
A
V
V
F
QG
G
G
G
Y
D
NA
P
D
F
L
D
A
Q
F
D
H
F
E
R
V
GTRPEVEVFN
H
A
I
V
D
N
A
T
SLY
R
D
R
L
L
R
T
GKP
V
L
F
M
L
VAG
V
D
Q
Y
R
R
DPITGEVEDDSLIA
R
V
V
R
E
E
I
S
S
L
L
A
D
ES
A
D
S
H
R
R
A
V
E
L
A
I
G
Q
L
R
P
V
V
E
R
L
R
A
S
F
PV
S
K
I
S
I
L
L
P
GPMQNLL
V
D
V
A
L
G
L
GLD
G
I
R
V
G
LEDGL
T
V
N
D
ARVPGG
V
R
K
A
RG
T
W
E
Q
V
S
L
V
R
E
E
L
L
G
R
G
A
T
I
L
T
A
A
Q
V
R
D
M
F
GLGI
13
PsiBlast_PDB
63.71
25%
7
- C2 -
1W7B
-
ANXA2_HUMAN
A:
[36-152]
-----------------------------------
E
R
D
A
L
N
I
E
T
A
I
K
T
--
K
G
V
D
E
V
T
---
I
V
N
I
L
T
N
R
S
N
E
Q
R
Q
D
I
A
F
A
Y
Q
R
R
T
K
------
K
E
L
A
S
A
L
K
S
A
L
S
G
H
L
------
E
T
V
I
L
G
L
L
K
T
P
A
Q
Y
--
D
A
S
E
L
K
A
S
M
---
K
----------
G
L
G
T
D
E
D
S
L
I
E
I
I
C
S
----
R
T
N
Q
E
L
Q
E
I
------------------
N
R
V
Y
K
E
M
Y
K
T
D
---
L
E
K
-----
D
I
I
S
D
T
--
S
G
D
F
--
R
K
L
M
V
A
L
A
K
G
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
62.69
25%
15
- C2 -
1XJL
4
ANXA2_HUMAN
A:
[16-132]
-----------------------------------
E
R
D
A
L
N
I
E
T
A
I
K
T
--
K
G
V
D
E
V
T
---
I
V
N
I
L
T
N
R
S
N
E
Q
R
Q
D
I
A
F
A
Y
Q
R
R
T
K
------
K
E
L
A
S
A
L
K
S
A
L
S
G
H
L
------
E
T
V
I
L
G
L
L
K
T
P
A
Q
Y
--
D
A
S
E
L
K
A
S
M
---
K
----------
G
L
G
T
D
E
D
S
L
I
E
I
I
C
S
----
R
T
N
Q
E
L
Q
E
I
------------------
N
R
V
Y
K
E
M
Y
K
T
D
---
L
E
K
-----
D
I
I
S
D
T
--
S
G
D
F
--
R
K
L
M
V
A
L
A
K
G
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
61.96
24%
32
- C2 -
1P68
-
?
A:
[1-102]
-----------------------------
M
Y
G
K
L
N
D
L
L
E
D
-
L
Q
E
V
L
K
N
L
H
K
N
W
H
G
-----------
G
K
D
N
L
H
D
V
D
--
N
H
L
Q
N
V
I
E
------
D
I
H
D
F
M
Q
G
G
G
S
G
---------------------------
G
K
L
Q
E
M
M
---
K
E
F
Q
-
Q
-----
V
L
D
E
L
N
N
H
L
----------
Q
-
G
G
--
K
H
T
------------------
V
H
H
I
E
Q
N
I
K
E
----------------------
I
F
--
H
H
L
E
E
L
V
H
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
61.78
16%
-36
- C2 -
3MZY
-
?
A:
[137-199]
-----------------------------------------------------------------------------------------------------------------------------------
E
E
I
E
E
F
---
K
K
F
S
E
N
-----
N
F
S
K
F
E
K
E
V
L
T
-
Y
L
I
----
R
-
G
Y
S
Y
R
E
----------------------
I
A
-
T
I
L
S
K
---
N
L
K
-----
S
I
D
N
T
I
--
Q
R
I
R
--
K
K
S
E
E
W
I
K
E
E
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
55.95
17%
-30
- C2 -
1S7O
-
Y1201_STRP1 (first)
A:
[13-72]
-------------------------------------------------------------------------------------------------------------------------------------
N
A
L
F
---
E
F
Y
A
-
A
-----
L
L
T
D
K
Q
M
N
Y
I
E
L
Y
Y
A
----
D
-
D
Y
S
L
A
E
----------------------
I
A
-
D
E
F
G
V
---
S
R
Q
-----
A
V
Y
D
N
I
--
K
R
T
E
--
K
I
L
E
T
Y
E
M
K
L
H
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
54.64
21%
-31
- C2 -
1L9Z
-
SIGA_THEAQ
H:
[355-429]
------------------------------------------------------------------------------------------------------------------------
S
P
V
E
A
A
--
A
Q
S
L
L
S
E
E
L
---
E
K
A
L
-
S
-----
K
L
S
E
R
E
A
M
V
L
K
L
R
K
G
LIDG
R
-
E
H
T
L
E
E
----------------------
V
G
-
A
Y
F
G
V
---
T
R
E
-----
R
I
R
Q
I
E
--
N
K
A
L
--
R
K
L
K
Y
H
E
S
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
HHSearch
53.73
24%
-28
- C2 -
1YIO
-
?
A:
[136-186]
----------------------------------------------------------------------------------------------------------------------------------------
L
---
E
Q
L
F
-
S
-----
S
L
T
G
R
E
Q
Q
V
L
Q
L
T
-
I
----
R
-
G
L
M
N
K
Q
----------------------
I
A
-
G
E
L
G
I
---
A
E
V
-----
T
V
K
V
H
R
--
H
N
I
M
--
Q
K
L
N
V
R
S
L
A
N
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
53.73
18%
-24
- C2 -
2A6H
-
?
F:
[339-414]
-----------------------------------------------------------------------------------------------------------------------
P
S
P
V
D
A
A
--
T
Q
S
L
L
S
E
E
L
---
E
K
A
L
-
S
-----
K
L
S
E
R
E
A
M
V
L
K
L
R
K
G
LIDG------
E
E
----------------------
V
G
-
A
F
F
G
V
---
T
R
E
-----
R
I
R
Q
I
E
--
N
K
A
L
--
R
K
L
K
Y
H
E
S
R
T
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
53.62
21%
-20
* C2 *
1KU3
-
SIGA_THEAQ
A:
[368-428]
---------------------------------------------------------------------------------------------------------------------------------------
E
L
---
E
K
A
L
-
S
-----
K
L
S
E
R
E
A
M
V
L
K
M
R
K
G
LIDG
R
-
E
H
T
L
E
E
----------------------
V
G
-
A
Y
F
G
V
---
T
R
E
-----
R
I
R
Q
I
E
--
N
K
A
L
--
R
K
L
K
Y
H
E
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
HHSearch
53.45
27%
-31
- C2 -
1FSE
-
GERE_BACSU
A:
[8-55]
----------------------------------------------------------------------------------------------------------------------------------------------
S
K
-
P
-----
L
L
T
K
R
E
R
E
V
F
E
L
L
-
V
----
Q
-
D
K
T
T
K
E
----------------------
I
A
-
S
E
L
F
I
---
S
E
K
-----
T
V
R
N
H
I
--
S
N
A
M
--
Q
K
L
G
V
K
G
R
S
Q
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
52.90
18%
-24
- C2 -
1TTY
-
SIGA_THEMA
A:
[320-383]
------------------------------------------------------------------------------------------------------------------------------------
M
R
E
E
L
---
E
K
V
L
-
K
-----
T
L
S
P
R
E
A
M
V
L
R
M
R
Y
G
LLDG
K
-
P
K
T
L
E
E
----------------------
V
G
-
Q
Y
F
N
V
---
T
R
E
-----
R
I
R
Q
I
E
--
V
K
A
L
--
R
K
L
R
H
P
S
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
HHSearch
52.44
24%
-16
- C2 -
1X3U
-
FIXJ_RHIME
A:
[133-186]
--------------------------------------------------------------------------------------------------------------------------------------
N
D
I
---
R
A
R
L
-
Q
-----
T
L
S
E
R
E
R
Q
V
L
S
A
-
V
V
----
A
-
G
L
P
N
K
S
----------------------
I
A
-
Y
D
L
D
I
---
S
P
R
-----
T
V
E
V
H
R
--
A
N
V
M
--
A
K
M
K
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
HHSearch
52.33
27%
-16
- C2 -
2RNJ
-
VRAR_STAAM
A:
[143-192]
---------------------------------------------------------------------------------------------------------------------------------------------
E
L
Y
-
E
-----
M
L
T
E
R
E
M
E
I
L
L
L
-
I
A
----
K
-
G
Y
S
N
Q
E
----------------------
I
A
-
S
A
S
H
I
---
T
I
K
-----
T
V
K
T
H
V
--
S
N
I
L
--
S
K
L
E
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53
Fugue
51.04
10%
-10
- C2 -
2VXG
-
EDC4_DROME
A:
[1216-1350]
-----------------------------------
G
A
M
G
D
S
I
K
Q
L
L
M
A
--
G
Q
I
N
K
A
F
---
H
Q
-
A
L
L
-
A
N
D
L
G
L
V
E
--
F
T
L
R
H
T
D
S
------
N
Q
A
F
A
R
L
E
Q
K
V
L
L
S
L
------
I
Q
Q
I
S
A
D
M
T
N
H
N
E
L
--
K
Q
R
Y
L
N
E
A
L
---
L
A
I
N
-
M
-----
A
D
-----------
P
I
----
T
-
R
E
H
A
P
K
V
------------------
L
T
E
L
Y
R
N
C
Q
Q
F
---
I
K
N
-----
S
P
K
N
S
Q
--
F
S
N
V
--
R
L
L
M
K
A
I
I
T
Y
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
50.73
27%
7
- C4 -
3M46
-
?
A:
[562-643]
-------------------------------------------------------------------
E
Q
N
A
R
G
R
Y
--
V
Y
L
P
E
E
M
K
F
I
K
F
M
P
D
G
S
I
S
E
E
V
L
E
K
G
V
H
Y
------
V
D
V
A
---
L
N
E
V
P
L
F
--
I
R
S
G
K
C
I
P
V
---
A
E
A
A
-
E
-----
C
V
K
D
I
D
T
E
N
M
Q
L
I
G
Y
----
E
-
G
S
S
Y
T
L
Y
------------------
E
D
D
G
I
H
K
D
Y
D
K
---
K
E
N
-----
Y
R
V
L
T
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------