Atome 2 Filter

@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling

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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : bsu04040: (2016-06-07 )
MSVQREDVDIKLIAIDMDGTLLNDEQLISDENRKAIREAEDKGVYVVISTGRTLMTCRELAESLKLSSFLITANGSEIWDSNFNLVERKLLHTDHIQMMWDLRNKHNTNFWASTVNKVWRGEFPENITDHEWLKFGFDIEDDDIRNEVLEELRKNKELEITNSSPTNIEVNALGINKAAALAKVTEKLGFTMENVMAMGDSLNDIAMIKEAGLGVAMGNAQDIVKETADYITDTNIEDGVAKAIRHWVL

Atome Classification :

	(20 SA)									.........10........20....-.-..-.30....-....40........50........60....---.---..---.70.......--.--------------80-.-.......90.-----------.......----100--.-....--.------------..--------110------..---------------...-----.--.--.----.---------120--------.-----.---.------------.--------.--------------.------.----------.-----.----------130------.--......------.140-.........--------150---------------------...--.-..--..160.......170.......180.......190.......200.......210.......220.......230.........240.......
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MSVQREDVDIKLIAIDMDGTLLNDE-Q-LI-SDENRKA-IREAEDKGVYVVISTGRTLMTCRELAESLK---L---SS---FLITANGSEI--W--------------DS-N-FNLVERKLLH-----------TDHIQMM----W-D--L-RNKH--N------------TN--------F--------WA---------------STV-----N--K--V----W---------R----------G-----E---F------------P--------E--------------N------I----------T-----D----------HE-------W--LKFGFD------IE---DDDIRNEVL--------E-E---------------------LRK--N-KE--LEITNSSPTNIEVNALGINKAAALAKVTEKLGFTMENVMAMGDSLNDIAMIKEAGLGVAMGNAQDIVKETADY--ITDTNIEDGVAKAIRHWVL
149	HHSearch	89.65	32%	-116	- C2 -	4DW8		?	A:[4-269]	--------KYKLIVLDLDGTLTNSK-K-EI-SSRNRET-LIRIQEQGIRLVLASGRPTYGIVPLANELR---MNEFGG---FILSYNGGEI--I--------------NW-ESKEMMYENVLP-----------NEVVPVL----Y-E--C-ARTN--H------------LS--------I--------LT---------------YDG-----AE-IV-T----ENSLDPYVQKE----------A-----F---L------------NK-------M--------------A------IRETN------DFLTDIT----------LP-------V--AKCLIV------GD---AGKLI-PVE--------S-E---------------------LCIRLQ-GK--INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF-
21	PsiBlast_CBE	89.51	31%	-104	- C2 -	1RKQ		YIDA_ECOLI	B:[5-271]	---------IKLIAIDMDGTLLLPD-H-TI-SPAVKNA-IAAARARGVNVVLTTGRPYAGVHNYLKELH---M---EQPGDYCITYNGALV--Q--------------KAAD-GSTVAQTALS-----------YDDYRFL----E-K--L-SREV--G------------SH--------F--------HALDRTTLYTANRDISYYTV-----H--E--S----F---------V----------A-----T---I------------P--------L--------------V------F----------C-----E----------AEKMDPNTQF--LKVMM-------ID---EPAILDQAI--------A-R---------------------IPQEVK-EK--YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYVL
3	PsiBlast_PDB	89.35	31%	-102	- C2 -	1RKQ		YIDA_ECOLI	A:[5-271]	---------IKLIAIDMDGTLLLPD-H-TI-SPAVKNA-IAAARARGVNVVLTTGRPYAGVHNYLKELH---M---EQPGDYCITYNGALV--Q--------------KAAD-GSTVAQTALS-----------YDDYRFL----E-K--L-SREV--G------------SH--------F--------HALDRTTLYTANRDISYYTV-----H--E--S----F---------V----------A-----T---I------------P--------L--------------V------F----------C-----E----------AEKMDPNTQF--LKVMM-------ID---EPAILDQAI--------A-R---------------------IPQEVK-EK--YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYVL
155	HHSearch	89.18	32%	-100	- C2 -	1RKQ		YIDA_ECOLI	A:[2-270]	------SLAIKLIAIDMDGTLLLPD-H-TI-SPAVKNA-IAAARARGVNVVLTTGRPYAGVHNYLKELH---MEQPGD---YCITYNGALV--Q--------------KA-ADGSTVAQTALS-----------YDDYRFL----E-K--L-SREV--G------------SH--------F--------HA---------------LDR-----TTLY--TA---NR--------DI---------S-----Y---Y------------TVHESFVATI--------------P------LVFCEAEKMD-P-----N----------TQ-------F--LKVMMI------DE---PAILD-QAI--------A-R---------------------IPQEVK-EK--YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYV-
145	HHSearch	86.43	32%	-117	- C2 -	3MPO	-	?	A:[3-264]	---------IKLIAIDI--------------AQATIDA-VQAAKAQGIKVVLCTGRPLTGVQPYLDAMD---IDGDDQ---YAITFNGSVA--Q--------------TI-S-GKVLTNHSLT-----------YEDYIDL----E-A--W-ARKV--R------------AHFQIETPDYI--------YT---------------ANK-----D--I--SA---YTIA------E----------S-----Y---L------------VRML-----I--------------Q------YREVSETP---R-----D----------LT-------I--SKAMFV------DY---PQVIE-QVK--------A-N---------------------MPQDFK-DR--FSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTL--QGNDLTMIKYAGLGVAM---IDEVKEAAQA--VT------GVAAAIR----
147	HHSearch	85.40	29%	-98	- C2 -	3DNP		YHAX_BACSU	A:[6-274]	---------KQLLALNIDGALLRSN-G-KI-HQATKDA-IEYVKKKGIYVTLVTNRHFRSAQKIAKSLK---L---DA---KLITHSGAYI--A--------------EK-I-DAPFFEKRIS-----------DDHTFNI----V-Q--V-LESY--Q------------CN--------I--------RL---------------LHE-----K--Y--SIG--N---------KKKVNSNLLGKA-----L---IHPSDPIFY----P--------V--------------QF-----VESLSDLL---M-----D----------EP-------VSAPVIEVY------TE---HDIQH-DIT--------E-T---------------------ITKA-F-PA--VDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADW--VTRSNDEQGVAYMMKEYF-
16	PsiBlast_PDB	84.93	24%	-98	- C2 -	1RLM		SUPH_ECOLI	A:[3-260]	---------VKVIVTDMDGTFLNDA-K-TY-NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELK---D---EI---SFVAENGALV--Y--------------EH-G-KQLFHGELTR-----------HESRIVI----G-E--L-LKDK--Q------------LN--------F--------VA---------------CGL-----Q--S--A----Y---------V----------S-----EN--A------------P--------EAFVALMAKHYHRLKP------V----------K-----D----------YQEIDDV--L--FKFSLN------LP---DEQIP-LVI--------D-K---------------------LHV--A-LDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARY--ATDDNNHEGALNVIQ----
163	HHSearch	84.68	28%	-105	- C2 -	3R4C		?	A:[5-266]	--VPRGSHMIKVLLLDVDGTLLSFETH-KV-SQSSIDA-LKKVHDSGIKIVIATGRAASDLHEID-AVP-------YD---GVIALNGAEC--V--------------LR-D-GSVIRKVAIP-----------AQDFRKS----M-E--L-AREF--D------------FA--------VALELNEGVFV---------------NRL-----T--P--T----V---------E----------Q-----IAGIV------------E--------H--------------P------VPPVVDIEEMFE-----R----------KE-------C--CQLCFY------FD---EEAEQ-KVM--------P-L---------------------LSG--------LSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADF--VTDTVDNSGLYKALKHFG-
17	PsiBlast_PDB	84.11	24%	-93	- C2 -	1RLT		SUPH_ECOLI	A:[3-260]	---------VKVIVTDMDGTFLNDA-K-TY-NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELK---D---EI---SFVAENGALV--Y--------------EH-G-KQLFHGELTR-----------HESRIVI----G-E--L-LKDK--Q------------LN--------F--------VA---------------CGL-----Q--S--A----Y---------V----------S-----EN--A------------P--------EAFVALMAKHYHRLKP------V----------K-----D----------YQEIDDV--L--FKFSLN------LP---DEQIP-LVI--------D-K---------------------LHV--A-LDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARY--ATDDNNHEGALNVIQ----
5	PsiBlast_PDB	83.60	27%	-91	- C2 -	3DNP		YHAX_BACSU	A:[7-273]	----------QLLALNIDGALLRSN-G-KI-HQATKDA-IEYVKKKGIYVTLVTNRHFRSAQKIAKSLK---L---DA---KLITHSGAYI--AEKIDAPFFEKRISDDH-T-FNIVQVLESY-----------QCNIRLLHEK-Y-S--I-GNKKKVN------------SN--------L--------LG---------------KALIHPSDP--I--F----Y---------P----------V-----Q---F------------V--------E--------------S------L----------S-----DLLM-------DE-------P--VSAPV-------IEVYTEHDIQHDIT--------E-T---------------------ITK--AFPA--VDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADW--VTRSNDEQGVAYMMKEY--
8	PsiBlast_PDB	83.39	27%	-105	- C2 -	3R4C		?	A:[5-265]	--VPRGSHMIKVLLLDVDGTLLSFETH-KV-SQSSIDA-LKKVHDSGIKIVIATGRAASDLHEI-DAVP---Y---DG----VIALNGAEC--V--------------LR-D-GSVIRKVAIP-----------AQDFRKS----M-E--L-AREF--DFAVALELNEGVFVN--------R--------LT---------------PTV-----E--Q--I----A---------GI---------V-----E---H------------PVPPVVDIEE--------------M------F----------E-----R----------KE-------C--CQLCFY------F----DEEAEQKVM--------P-L---------------------LSG--------LSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADF--VTDTVDNSGLYKALKHF--
7	PsiBlast_PDB	82.84	27%	-86	- C2 -	2QYH		?	A:[4-247]	----------KIVFFDIDGTLLDEQ-K-QL-PLSTIEA-VRRLKQSGVYVAIATGRAPFMFEHVRKQLG---I---DS---F-VSFNGQYV--V--------------FE-G--NVLYKQPLR-----------REKVRAL----T-EEAH-KNGH--P------------LV--------F--------MD---------------AEK-----M--R--A----S---------I----------G-----D---H------------P--------H--------------I------H----------V-----S----------MA-------S--LKFAHPPVDPLYYE---NKDIYQALLFCRAEEEEP-Y---------------------VRN--Y-PE--FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADF--VTKPVDKEGI---------
160	HHSearch	82.58	24%	-98	- C2 -	2PQ0	-	?	A:[2-255]	--------GRKIVFFDIDGTLLDEQ-K-QL-PLSTIEA-VRRLKQSGVYVAIATGRAPFMFEHVRKQLG---I----D---SFVSFNGQYV--V--------------FE---GNVLYKQPLR-----------REKVRAL----T-E--E-AHKN--G------------HP--------L--------VF---------------MDA-----EK-MR-ASI--G---------DH---------P-----H---I------------HVSMAS---L--------------K------F----------A-----HPPVDPLYYENKD-------I--YQALLF------CR---AEE----EE--------P-Y---------------------VRN--Y-PE--FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADF--VTKPVDKEGIWYGLKQLQ-
6	PsiBlast_PDB	82.57	27%	-88	- C2 -	2PQ0	-	?	A:[4-247]	----------KIVFFDIDGTLLDEQ-K-QL-PLSTIEA-VRRLKQSGVYVAIATGRAPFMFEHVRKQLG---I---DS---F-VSFNGQYV--V--------------FE-G--NVLYKQPLR-----------REKVRAL----T-EEAH-KNGH--P------------LV--------F--------MD---------------AEK-----M--R--A----S---------I----------G-----D---H------------P--------H--------------I------H----------V-----S----------MA-------S--LKFAHPPVDPLYYE---NKDIYQALLFCRAEEEEP-Y---------------------VRN--Y-PE--FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADF--VTKPVDKEGI---------
153	HHSearch	81.59	25%	-96	- C2 -	1RLM		SUPH_ECOLI	A:[2-263]	--------AVKVIVTDMDGTFLNDA-K-TYNQPRFMAQ-YQELKKRGIKFVVASGNQYYQLISFFPELK---D---EI---SFVAENGALV--Y--------------EH---GKQLFHGELT-----------RHESRIV----IGE--L-LKDK--Q------------LN--------FVACGLQSAYV---------------SEN-----A--P--EA---FV--------ALMA-------K-----H---Y------------H--------RLK------------P------V----------KDYQEID----------DV-------L--FKFSLN------LP---DEQIP-LVI--------D-K---------------------LHVALD-GI--MKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARY--ATDDNNHEGALNVIQAVL-
144	HHSearch	81.04	24%	-98	- C2 -	3FZQ		?	A:[4-271]	--------LYKLLILDIDGTLRDEV-Y-GI-PESAKHA-IRLCQKNHCSVVICTGRSMGTIQDDVLSLG---V----D---GYIAGGGNYI--Q--------------YH---GELLYNQSFN-----------QRLIKEV----V-C--L-LKKR--E------------VA--------F--------SI---------------ESQ-----EKVF--M----NQKAK-----E----------IFETMNQ---LKGTNSCINKQHIQ--------E--------------KITYENNIEEY-------K-----S----------QD-------I--HKICLW------SN---EKVFD-EVK--------D-I---------------------LQD--K-ME--LAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATS--ICEDIFDNGIYKELKRR--
2	PsiBlast_PDB	81.04	30%	-85	- C2 -	3NIW		?	A:[6-267]	----------KLIVLDLDGTLTNSK-K-EI-SSRNRET-LIRIQEQGIRLVLASGRPTYGIVPLANELRMNEF---GG---FILSYNGGEIINW--------------ES-K-EMMYE-NVLP-----------NEVVPVL----Y-E--CARTNH--L------------SI--------L--------TY---------------DGA-----E--I--V----T---------E----------N-----S---L------------D--------P--------------Y------V----------Q-----K----------EA-------F--LNKMAI------RE---TNDFLTDIT--------L-PVAKCLIVGDAGKLIPVESELCIRL--Q-GK--INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADY--ITLTNDEDGVAEAIER---
152	HHSearch	80.90	23%	-99	- C2 -	3PGV		?	A:[21-283]	---------YQVVASDLDGTLLSPD-H-FL-TPYAKET-LKLLTARGINFVFATGRHYIDVGQIRDNLG---I---RS---YMITSNGARV--H--------------DS-D-GQQIFAHNLD-----------RDIAADL----F-E--I-VRND--PK-----------IVTN------V--------YR---------------EDE-----W--Y--MNRHR---------------------F-----F---K------------EAV------FNY------------KLYEPGEL----------D-----P----------QG-------I--SKVFFT------CED--HEHLL-PLE--------Q-A---------------------MNARWG-DR--VNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY-
1	PsiBlast_PDB	80.79	32%	-92	- C2 -	4DW8		?	A:[6-267]	----------KLIVLDLDGTLTNSK-K-EI-SSRNRET-LIRIQEQGIRLVLASGRPTYGIVPLANELR---MNEFGG---FILSYNGGEIINW--------------ES-K-EMMYENVLPNEVVPVLYECARTNHLSILTYDGA-E--I-VTEN--S------------LD--------P--------YVQKE------------AFL-----N--K--M----A---------I----------R-----E---T------------N--------D--------------F------L----------T-----DITLPV-----AK-------C--LIVGDA------GK---LIPVESELC--------------------------------IRL--Q-GK--INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADY--ITLTNDEDGVAEAIER---
157	HHSearch	80.41	25%	-119	- C2 -	3DAO		?	A:[19-283]	-------GMIKLIATDIDGTLVKDG-SLLI-DPEYMSV-IDRLIDKGIIFVVCSGRQFSSEFKLFAPIK---H---KL---LYITDGGTVV--R--------------TP---KEILKTYPMD-----------EDIWKGM----C-R--M-VRDELPA------------CD--------Y--------FA---------------ATP-----D--FCFA----EDGGS-----P----------IFH---L---L------------R--------DSYGFEMR-------E------VDDITRL----D-----R----------ND-------I--IKFTVF------HP---D-KCE-ELC--------TPVF--------------------IPAW-N-KK--AHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKH--TCAPYWENGVLSVLKSFL-