@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu04310: (2016-06-07 )
MKQIMIFLTSFMLLAMTGQTALAKDVQVSGSLLGKSSQEQAKQQVLTSELITLYGSKDSAELTYQIPAGASSGNQQLVIEYEASNLLISPSSLTVVIDDEPVKTLKLDGDSKRKTVKLNLNKSQSAQGYHNVSLKFYGVMKEGVCVRQDTSGNWIKIYPDSRLTLADSSEAKGTSLDHYPYPFAQSGNTAEETAIVIPDNPSSAEIEAAVKTEGYLKTVDSSVSIAYVTESELKKIDKPTIVIGVDKHWNGKVKKLLKQAGLQAKGENLLLAERVLKAEGKQQPVLFAQAASEDALTKKISVMTDQTYTGQLSGDTLSISKLQQTEKKESDKLTLENFGAGDITIGADKTSSAHYFYPASAVLDENQSAKLSLKLKKSETIQASTAENESASQAAELKVMINGQPHSVRLDELGKEDKNGFYHVTVKVDPKLLQKNRYIDIQFVTTGLKENNPCNTTDEEKWVFIDKNSTLSYAIKGMSPSADFQEWPLPYAGNQDQTTLIVLPDTVSQSKLEELSLVTESFGNEAQHSYTVKKSSDVTANDAKGRNLIFIGGINQFSLLKEKSSDLLVPQEKNGSFDVSSFEMLNETTKQVVFTQASVWDSRYTMAVFAPSKGDGTAVTKEIISYLNSNDESATVLNETNSQQVFTNHQQLKSETNSSDAEQPTQDHSQKWMYIGVLALIMVVAAVFIWIAVRRKKRKTDTE
Atome Classification :
(20 SA)
.........10........20........30........40........50........60.----.....--..70.---.......80........90........100.....-----..110------.--------.......-.120.......130.......140-........150......--.160.......170.-......-180.......190......-.200.......210.......-----220.........230.......240.-......250.-......260.......270.......280.......290.......300-....-...310--........320....-....330....------...340.......350-.....-..-360..-.....370.....-..380.......390.....-.-.400----.......410.-....---..420........430..-..-...440.-...-...450...---....460...------....470---........480...-....490.----.---------.....500..-----------.....510.......520.......530.......540.......550---........560--..---......570....---...580..------...--------..590.......600.......610.......620.......630---.......640.......650--.......660.......670.......680.......690.......700.----
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MK
Q
I
M
I
F
L
T
S
F
M
L
L
AMTGQ
T
A
L
A
K
D
V
Q
V
S
G
S
LLGK
S
S
Q
E
Q
A
K
Q
Q
V
L
T
S
E
L
I
T
L
YGSKDS
A
E
L
----
T
Y
Q
IP--AGASS---GN
Q
Q
L
V
I
E
YEAS
N
L
L
ISPS
S
L
T
V
V
IDDEP
V
K
T
L
K
L-----DGD--------S--------K
R
K
T
V
K
L
-NLNKSQSAQG
Y
H
N
V
S
L
K
F
Y
G
V
MK--E
G
V
C
V
RQDTSG
N
W
I
K
IY--PDS
R
L
T
LADSSEAKG-TSLDHY-PYPFAQSGNTA
E
E
T
A
I
V
IP-DNPSSA
E
I
E
A
A
VKTE
G
Y
L
K
TV-----D--SS
V
S
I
A
Y
V
T
E
S
E
L
KKIDKP
T
I
V
I
-
G
VDKHW
N
G
K
V
-
K
K
L
L
K
QAGLQAKGE
N
L
L
L
A
E
R
V
L
K
AEGKQQ
P
V
L
F
A
QAASE
D
A
L
T
K
K
I
S
V
-MTDQ-TYTGQ---LSGDT
L
S
I
S
-
K
L
Q
Q
T
-
E
KKESD
K
L
T
L
E------NFGAG
D
I
T
IGADKTSS-A
H
Y
F
Y-
P
A
-
S
A
VLD-ENQS
A
K
L
S
L
K
LKK-S
E
T
I
Q
ASTAENESASQ
A
A
E
L
-
K
-
V
M
IN----GQPH
S
V
R
L
D
EL-GKED---KN
G
F
-
Y
H
V
T
V
K
V
D
P
K
L
LQ-KN-
R
Y
I
D
I
Q
F
-
V
TT-GLKENNPCN---TTDEE
K
W
V
F
I
------DKNS
T
L
----
S
Y
A
IKGMSPSADFQ-EWPLPYAG----N---------QD
Q
T
T
L
I
V
LP-----------DTV
S
Q
S
K
L
E
E
L
S
L
V
T
E
SFGNEA
Q
H
S
Y
T
VKKSSDVTANDAKG
R
N
L
I
F
I----GGI
N
Q
F
S
L
L
K
---EK---SSDLLVPQEKNGS---FD
V
S
S
F
E
M
------
L
N
E
--------
T
T
K
Q
V
V
F
T
QASVWDS
R
Y
T
M
A
V
F
APSKGD
G
T
A
V
T
K
E
I
I
S
Y
LNSNDE---
S
A
T
V
LNETNS
Q
Q
V
F
T
N
H
Q
Q
L
--KSETNSSDAEQP
T
Q
D
HS
Q
K
W
M
Y
I
G
V
L
A
L
I
M
V
V
A
A
V
F
I
W
I
A
V
R
R
KKRKTDTE----
22
Fugue
70.78
15%
-40
- C7 -
4HG6
3
?
B:
[36-702]
--
P
W
I
I
P
L
R
P
L
A
E
T
A
Q
V
G
------------------------------
P
L
F
R
L
Q
G
Q
Q
A
R
A
A
F
----
R
L
F
L
P
--
T
E
A
V
G
---
G
T
L
T
L
A
Q
R
S
S
I
D
-
I
L
P
E
S
S
Q
I
I
V
R
M
N
D
Q
E
I
G
R
F
T
P
-----
R
Q
F
--------
G
--------
A
L
G
A
V
T
M
-
P
L
G
E
A
V
R
A
-
G
D
N
L
V
T
I
E
A
Q
H
-
R
H
--
R
I
Y
C
G
A
D
A
E
F
D
L
W
T
E
V
D
--
L
S
Q
S
G
V
A
L
P
A
A
A
I
G
T
-
E
P
T
S
F
I
-
A
A
L
T
A
Q
A
E
S
-
G
R
P
V
E
I
R
T
P
-
T
P
P
D
E
A
T
L
R
T
L
A
Q
A
L
G
R
P
L
P
D
-----
E
--
A
L
P
L
A
L
S
K
P
W
S
A
E
T
G
P
T
Y
A
R
I
T
L
-
L
P
S
D
-------------------------
A
D
R
V
S
I
R
R
G
G
D
G
A
V
V
L
V
L
E
H
P
P
E
G
S
P
--------
N
A
-
S
L
V
A
D
---
L
L
G
A
T
P
T
L
P
-
P
P
T
L
P
-
Q
I
P
P
G
R
V
V
T
L
A
------
D
M
G
V
D
T
I
L
T
D
N
R
Y
F
N
R
-
D
I
D
F
Q
L
P
D
-
D
W
L
L
L
-
A
S
Q
K
A
Q
I
G
I
D
Y
G
F
-
A
G
----------
G
L
P
E
G
A
L
L
-
L
-
V
K
V
N
----
G
--
T
T
V
R
M
L
P
L
-
D
R
D
A
---
A
P
V
K
-
P
R
L
D
I
R
F
P
A
R
L
L
H
-
P
G
P
N
R
L
S
F
E
S
-
V
I
P
-
G
N
P
P
D
Q
P
C
P
---
A
S
-
A
G
D
L
M
Q
V
------
L
S
S
T
D
L
E
V
P
P
S
P
R
M
Q
M
A
D
M
A
R
D
L
A
-
Q
V
T
P
A
S
V
H
PATP
D
---------
G
L
A
R
T
L
P
F
M
A
A
FREVPDA
A
P
V
D
L
T
V
A
G
L
H
D
I
A
T
V
P
L
N
E
E
G
L
T
P
R
L
L
A
L
T
L
L
P
S
T
G
P
P
A
N
A
L
A
P
L
G
A
A
P
----
G
E
G
V
M
P
P
L
V
E
SN
W
S
D
---
R
A
Q
T
F
V
Q
A
T
L
Q
P
V
---
I
Q
T
V
R
R
M
L
RPGDG
N
L
A
E
--------
W
L
A
T
R
K
G
T
A
M
L
L
A
P
E
P
G
K
L
W
V
I
L
G
P
E
A
E
P
A
R
V
A
E
A
L
A
M
A
P
R
S
P
G
G
PRG
Q
V
A
V
L
G
S
D
G
R
W
S
S
W
S
K
P
G
L
L
P
E
L
R
E
P
V
S
L
D
N
V
R
S
V
V
G
N
V
A
S
A
R
P
P
L
L
L
G
G
M
L
G
L
A
W
I
S
A
A
I
A
V
G
F
V
L
R
T
R
-------
27
Fugue
49.31
20%
-47
- C5 -
4DIM
-
?
A:
[3-400]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
N
K
R
L
L
I
L
G
A
G
R
G
Q
L
G
L
Y
K
A
A
K
E
L
G
I
H
T
I
A
G
T
M
P
N
A
H
K
P
C
L
N
L
A
D
E
I
S
---
Y
M
D
I
S
N
P
D
E
V
E
Q
K
V
K
D
L
N
L
D
G
A
A
T
C
CLD
T
--
G
I
V
S
L
A
R
I
C
D
K
E
N
L
V
G
L
N
E
E
A
A
I
M
C
G
D
K
Y
----
K
M
K
E
A
F
K
K
Y
N
V
N
T
A
R
H
F
V
V
R
N
E
N
E
L
K
N
A
L
E
N
-------------
L
K
L
P
V
I
V
K
A
T
D
L
-
I
Y
I
A
K
-----
K
E
E
E
A
I
D
-
G
F
N
E
T
M
N
L
T
K
R
D
Y
C
I
V
E
E
F
I
E
G
Y
E
F
G
A
Q
A
F
V
Y
K
N
D
V
L
F
V
M
P
H
G
D
E
-
T
Y
M
S
H
T
-
A
-
V
P
V
G
H
Y
V
P
L
D
V
K
--
D
D
I
I
E
K
T
K
T
E
V
K
K
A
I
K
A
L
G
L
N
N
-
C
A
V
N
V
D
M
I
L
K
D
N
E
V
Y
I
I
E
L
T
G
R
------------
V
G
A
N
C
L
P
E
L
V
E
-
I
N
-
Y
G
I
E
Y
Y
K
M
I
A
S
M
A
I
S
E
N
P
L
V
F
W
S
Q
K
S
K
E
N
K
A
G
L
A
R
M
I
I
E
T
E
K
S
G
I
L
----
K
E
I
L
N
S
N
A
K
D
D
D
I
V
-
E
I
T
F
F
K
E
E
----
N
D
E
I
K
KFENS
N
D
C
I
G
Q
I
I
V
K
-----------
E
E
T
L
D
K
C
K
D
K
L
D
V
I
I
N
N
I
N
I
I
L
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
43.43
9%
-33
- C7 -
2A74
4
?
A:
[1-642]
S
P
M
Y
S
I
I
T
P
N
---------------------
I
L
R
L
E
S
E
E
T
M
--------
V
L
E
A
H
D
A
Q
G
D
V
P
V
----
T
V
T
V
H
D
F
P
G
K
K
L
---
V
L
S
S
E
K
T
V
L
T
P
A
T
N
H
M
G
N
V
T
F
T
I
P
-
A
R
N
K
F
V
T
V
Q
A
-----
T
F
G
--------
T
--------
Q
V
V
E
K
V
V
-
L
V
S
L
Q
S
---
G
Y
L
F
I
Q
T
D
-
K
T
I
Y
T
--
P
G
S
T
V
L
Y
R
I
F
T
V
N
H
K
L
L
--
P
V
G
R
T
V
M
V
N
I
E
N
P
E
G
-
I
P
V
K
Q
D
-
S
L
S
S
Q
N
Q
L
G
V
L
P
L
S
W
D
-
I
P
-
E
L
V
N
M
G
Q
W
K
I
R
A
Y
Y
E
N
S
P
Q
Q
--------------
V
F
S
T
E
F
E
V
K
E
Y
V
L
P
S
F
E
V
-
I
V
E
P
--
T
E
K
F
-
Y
Y
I
Y
N
E
K
G
L
E
V
T
I
T
A
R
F
L
Y
G
K
K
V
E
G
T
A
F
V
I
F
G
I
Q
D
G
E
Q
R
I
S
L
P
E
S
L
K
R
I
-
P
I
E
D
G
S
G
E
V
V
---
L
S
R
K
V
L
L
D
G
-
V
R
A
E
D
-
L
V
G
K
S
L
Y
V
S
A
T
------
V
I
L
H
S
G
S
D
M
V
Q
A
E
R
S
G
-
I
P
I
V
T
-
S
P
-
Y
Q
I
H
F
-
T
K
T
P
K
Y
F
K
P
G
M
P
F
-
D
L
M
V
F
V
T
N
P
D
G
---
S
P
A
Y
R
V
-
P
-
V
A
V
Q
----
G
E
D
T
V
-----
Q
-
S
L
T
Q
---
G
D
G
V
-
A
K
L
S
I
N
T
H
P
S
--
Q
-
K
P
-
L
S
I
T
V
R
T
-
K
K
Q
-
E
L
S
E
A
E
Q
A
T
---
R
T
M
Q
A
L
P
Y
S
T
------
V
G
N
S
N
N
----
Y
L
H
L
S
V
L
R
T
E
L
R
---------
P
G
----
E
---------
T
L
N
V
N
F
L
L
R
M
-----------
D
R
A
H
E
A
K
I
R
Y
Y
T
Y
L
I
M
N
K
G
-------
R
L
L
K
A
G
R
Q
V
R
E
P
G
Q
D
L
V
V
L
P
L
----
S
I
T
T
D
F
I
P
S
F
---
R
L
---
V
A
Y
Y
T
L
I
G
A
S
G
Q
R
E
V
V
A
D
S
V
W
V
D
V
------
K
D
S
--------
C
V
G
S
L
V
V
K
S
G
Q
S
E
D
R
Q
P
V
-----
P
G
Q
Q
M
T
L
K
I
E
G
D
H
G
A
R
V
V
L
V
A
V
---
D
K
G
V
F
V
L
N
K
K
N
K
L
--
T
Q
S
K
I
--
W
D
V
V
E
K
A
D
I
G
C
T
P
G
S
G
K
D
Y
A
G
V
F
S
D
A
G
L
T
F
T
S
S
S
---
G
Q
Q
T
A
Q
R
A
E
L
Q
C
P
Q
----
24
Fugue
42.12
10%
-41
* C7 *
4FXK
1
?
A:
[1-651]
--
K
P
R
L
L
L
F
S
P
S
V
V
H
L
G
V
P
L
S
V
G
V
Q
L
Q
-------
D
V
P
R
G
Q
V
V
K
G
S
V
F
L
R
N
P
S
R
N
N
V
P
C
S
P
K
V
----
D
F
T
L
S
--
S
E
R
D
---------------------
F
A
L
L
S
L
Q
V
P
L
K
D
A
K
S
C
G
L
-----
H
Q
L
--------
L
--------
R
G
P
E
V
Q
L
-
V
A
H
S
P
W
L
K
D
S
L
S
R
T
T
N
I
--------
Q
G
I
N
L
L
F
S
S
R
R
G
H
L
F
L
Q
--
T
D
Q
P
I
Y
------
N
P
G
-
Q
R
V
R
Y
R
-
V
F
A
L
D
Q
K
M
R
P
S
T
D
T
I
T
V
M
V
-
E
N
S
H
G
------
L
R
V
R
K
K
E
V
Y
M
-----
P
--
S
S
I
F
Q
D
D
F
V
I
P
D
I
S
E
P
G
T
W
K
I
S
A
-
R
F
S
D
G
L
E
S
N
S
-
S
-----
T
Q
F
E
V
K
K
Y
V
L
P
N
F
E
V
K
I
T
P
G
---
K
P
Y
I
L
T
V
P
G
H
L
D
E
M
--
Q
L
D
I
-
Q
A
R
Y
-
I
Y
G
K
P
---
V
Q
G
----
V
A
-
Y
V
R
F
G
-
L
L
D
E
D
G
K
K
T
F
F
------
R
G
L
E
S
Q
T
K
L
V
N
G
Q
S
H
I
-
S
L
S
K
A
-
E
F
-
Q
D
A
L
E
-
K
L
N
M
G
I
T
D
L
Q
G
L
R
-
L
Y
V
A
A
A
I
I
E
S
P
G
G
E
M
E
E
A
E
L
-
T
S
W
Y
F
V
----
S
S
P
F
S
L
D
L
S
K
T
-
K
R
H
L
---
V
P
G
A
P
F
L
L
Q
A
L
V
R
E
M
S
G
S
-
P
A
-
S
G
I
P
V
K
V
-
S
A
T
-
V
S
S
P
G
S
V
P
E
---
V
Q
D
I
Q
Q
N
T
D
G
------
S
G
Q
V
S
I
----
P
-----
I
I
I
P
Q
T
I
S
-
E
L
Q
L
S
V
S
A
----
G
---------
S
P
H
P
A
I
A
R
L
T
-----------
V
A
A
P
P
S
G
G
P
G
F
L
S
I
E
R
P
D
S
R
P
P
R
V
G
D
T
L
N
L
N
L
R
A
V
G
S
G
A
T
F
S
H
Y
Y
Y
M
I
L
S
R
G
Q
I
V
F
M
N
R
E
P
---
K
R
TL
T
S
V
S
V
F
V
D
H
H
L
A
P
S
---
F
Y
F
V
A
F
Y
Y
------
H
G
D
H
P
V
A
----
N
S
L
R
V
D
V
Q
A
G
A
C
E
G
K
L
E
L
S
V
D
G
A
K
Q
Y
R
N
G
E
S
V
K
L
H
L
E
T
-----
D
S
---
L
A
L
V
A
L
G
A
L
D
T
A
L
Y
A
A
G
S
K
S
--
H
K
P
L
N
M
G
K
V
F
E
A
M
N
S
Y
D
L
G
C
G
P
G
G
G
D
S
A
L
Q
V
F
Q
A
A
G
L
A
F
S
D
G
D
Q
W
T
L
S
R
K
R
LSCP
14
HHSearch
36.57
50%
-303
- C4 -
2L2T
-
ERBB4_HUMAN
A:
[72-81]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
V
Y
V
R
R
K
S
I
K
--------
10
HHSearch
33.66
12%
-87
- C8 -
4P02
2
?
B:
[316-518]
------------------------------------
G
R
V
V
T
L
A
D
M
G
V
D
T
I
L
T
D
N
R
-
Y
F
N
R
D
I
----
D
F
Q
L
P
--
D
D
W
L
L
LAS
Q
K
A
Q
I
G
I
D
Y
G
F
A
G
G
L
P
E
G
A
L
L
L
V
K
V
N
G
T
T
V
R
M
L
P
L
-----
D
R
D
A-------
A
P-------
V
K
P
R
L
D
I
-
R
F
P
A
R
L
L
H
P
G
P
N
R
L
S
F
E
S
V
I
P
G
N
PP
D
Q
P
C
P
A
--
S
A
G
D
L
M
Q
V
L
--
S
S
T
D
L
E
V
P
P
S
P
R
M
Q
M
-
A
D
M
A
R
D
-------
L
A
Q
V
-
T
P
A
S
V
H
P
A
-
T
P
D
--
G
L
-
A
R
T
L
P
F
M
A
A
F
R
E
V
-----
P
DA
A
P
V
D
L
T
V
A
G
L
H
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
32.80
23%
-110
- C8 -
4AW7
2
PORA_BACPM
A:
[490-573]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
L
S
F
P
F
-
T
G
-
I
E
S
G
---
S
G
R
A
S
L
R
M
S
I
G
R
-
P
V
S
------------
A
S
K
K
P
-
V
-
V
K
I
N
----
G
T
A
V
S
V
P
D
N
W
K
-
G
Y
G
Q
SNR
N
I
F
F
-
G
M
I
E
V
P
F
D
I
Q
L
L
K
N
G
D
-
N
N
V
D
I
T
F
-
S
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
32.55
24%
-49
- C8 -
3SZ6
1
?
A:
[25-120]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
S
S
R
-
M
N
R
Y
F
-
E
S
-
P
A
T
L
T
V
K
N
G
K
Q
Y
V
S
F
K
V
K
D
-
S
T
S
I
K
S
F
Q
V
E
K
D
G
--
Q
F
V
E
T
-
T
-
V
L
S
E
----
N
K
K
D
N
T
R
V
V
E
F
-
E
V
A
D
---
L
S
K
K
-
L
N
G
K
V
K
I
N
I
P
I
I
N
-
Y
N
-
A
S
Y
D
I
R
F
-
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
31.73
24%
-43
- C8 -
3SIK
1
?
A:
[30-128]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
S
S
R
-
M
N
R
Y
F
-
E
S
-
P
A
T
L
T
V
K
N
G
K
Q
Y
V
S
F
K
V
K
D
-
S
T
S
I
K
S
F
Q
V
E
K
D
G
--
Q
F
V
E
T
-
T
-
V
L
S
E
----
N
K
K
D
N
T
R
V
V
E
F
-
E
V
A
D
---
L
S
K
K
-
L
N
G
K
V
K
I
N
I
P
I
I
N
-
Y
N
-
A
S
Y
D
I
R
F
-
V
F
D
-
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
28.34
14%
-97
- C8 -
4AW7
2
PORA_BACPM
A:
[489-574]
---------------------------------------------------------
S
S
L
S
F
----
P
F
T
G
I
--
E
S
G
-
S
---
G
R
A
S
L
R
M
S
I
G
R
P
V
S
--
A
S
K
K
P
V
V
K
I
N
G
T
A
V
S
-
V
P
D
-----
N
W
K
--------
G
YGQSNRN
I
F
F
G
M
I
E
V
-
P
F
D
I
Q
L
L
K
N
G
D
N
N
V
D
I
T
F
S
D
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
27.69
29%
1
- C6 -
1RF6
2
AROA_STRPN
A:
[166-264]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
Q
V
-
K
S
A
L
M
F
A
A
L
Q
A
K
G
E
S
V
I
I
E
K
E
Y
T
R
N
H
T
E
D
M
L
Q
Q
F
G
G
H
L
S
V
D
G
--
K
K
I
T
V
-
Q
G
P
Q
-
K
L
T
G
Q
K
V
V
V
P
G
D
I
S
S
A
A
F
W
L
V
A
G
-
L
I
A
P
N
S
R
L
V
L
Q
------
N
V
G
I
N
E
T
R
T
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
27.61
19%
-71
* C8 *
3WIH
-
ROBO1_HUMAN
A:
[1-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
P
P
Q
G
V
T
V
S
K
N
-
D
G
N
G
---
T
A
---
I
L
V
S
W
Q
P
P
P
E
M
V
Q
-------
E
Y
K
V
-
W
C
L
-
G
N
E
T
R
Y
H
I
N
---
K
T
V
D
--------------
G
S
T
F
----
S
V
V
I
P
F
L
V
P
G
I
R
Y
S
V
E
V
A
A
S
G
S
G
----
V
---------
K
S
E
P
Q
F
I
Q
L
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
27.57
35%
-24
- C6 -
3HDL
3
?
A:
[83-136]
---------------------------------
A
K
S
A
V
E
A
A
C
P
Q
T
V
S
C
A
D
I
L
A
F
A
A
R
D
S
A
N
L
A
GN
I
T
Y
Q
V
P
--
S
G
R
R
D
---
G
T
V
S
L
A
S
E
A
N
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
27.38
29%
-1
- C6 -
1RF5
-
AROA_STRPN
A:
[166-264]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
Q
V
-
K
S
A
L
M
F
A
A
L
Q
A
K
G
E
S
V
I
I
E
K
E
Y
T
R
N
H
T
E
D
M
L
Q
Q
F
G
G
H
L
S
V
D
G
--
K
K
I
T
V
-
Q
G
P
Q
-
K
L
T
G
Q
K
V
V
V
P
G
D
I
S
S
A
A
F
W
L
V
A
G
-
L
I
A
P
N
S
R
L
V
L
Q
------
N
V
G
I
N
E
T
R
T
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
27.20
29%
7
- C6 -
1RF4
1
AROA_STRPN
A:
[166-264]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
Q
V
-
K
S
A
L
M
F
A
A
L
Q
A
K
G
E
S
V
I
I
E
K
E
Y
T
R
N
H
T
E
D
M
L
Q
Q
F
G
G
H
L
S
V
D
G
--
K
K
I
T
V
-
Q
G
P
Q
-
K
L
T
G
Q
K
V
V
V
P
G
D
I
S
S
A
A
F
W
L
V
A
G
-
L
I
A
P
N
S
R
L
V
L
Q
------
N
V
G
I
N
E
T
R
T
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
26.95
33%
-
- C3 -
2M20
-
EGFR_HUMAN
A:
[24-29]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
F
I
R
R
------------
19
HHSearch
25.39
17%
-117
- C8 -
3FCG
1
CAF1A_YERPE
A:
[26-68]
--------------------------------------------------------------------------------------------------
Q
A
R
V
E
V
L
R
D
G
Y
T
V
S
N
E
L
V
-----
P
S
G
--------------------
P
F
E
L
A
N
L
P
------
G
S
G
E
L
K
V
I
I
H
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
24.43
15%
-51
- C7 -
3LLV
1
?
A:
[6-137]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Y
E
Y
I
V
I
-
G
S
E
A
A
G
V
G
L
V
-
R
E
L
T
A
------------
A
G
K
K
V
L
A
V
D
K
S
K
E
K
I
E
L
L
E
D
E
G
F
D
A
V
I
A
D
P
----
T
D
E
-
S
F
Y
R
S
---
L
D
L
E
G
V
S
A
V
-
L
I
T
G
S
-
D
D
E
F
N
L
K
I
L
K
A
------
L
R
S
V
S
D
V
Y
A
I
V
R
V
S
S
P
-
K
K
K
E
E
-
F
E
-
E
A
G
A
N
-
L
V
V
L
V
A
D
A
V
K
Q
A
F
M
D
K
I
K
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
24.38
21%
-104
- C7 -
2JX5
-
?
A:
[1-69]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
V
I
---
V
R
---
L
Q
D
Q
T
L
P
F
E
L
P
A
G
---
A
R
A
S
Q
L
S
N
------
L
L
S
S
SG
M
A
F
S
L
H
T
Q
G
R
V
L
S
E
A
A
E
L
N
D
K
M
V
I
D
A
F
V
P
A
D
G
A
G
L
E
----------------------------------------------------------------------------------------------
13
HHSearch
23.68
6%
-68
- C8 -
1NKG
1
RGLA_ASPAC
A:
[427-486]
--------------------------------------------------------------------------------------------------
G
G
R
P
Q
A
T
I
N
S
Y
T
G
S
-
A
P
A
APTNL
D
S
R
GVTRGAYR
G
--------
L
G
E
V
Y
D
V
-
S
I
P
S
G
T
I
V
A
G
T
N
T
I
T
I
N
V
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------