@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu04320: (2016-06-07 )
MYHSIKRFLIGKPLKSQAAGEQKLTKLKALAMLSSDALSSVAYGTEQILIILATISAAAFWYSIPIAVGVLILLLALILSYRQIIYAYPQGGGAYIVSKENLGEKPGLIAGGSLLVDYILTVAVSISAGTDAITSAFPALHDYHVPIAIFLVLVIMILNLRGLSESASILAYPVYLFVVALLVLIAVGLFKLMTGQIDQPAHHTSLGTPVAGITLFLLLKAFSSGCSALTGVEAISNAIPAFKNPPARNAARTLAMMGILLAILFSGITVLAYGYGTAPKPDETVVSQIASETFGRNVFYYVIQGVTSLILVLAANTGFSAFPQLAFNLARDQYMPRMFTVRGDRLGFSNGIIFLGFASIVLIILFGGQTEHLIPLYAVGVFIPFTLSQTGMCMKWIKQKPKGWIGKMLINSCGALISFMVLSILFVTKFNVVWPVLIFMPIVVLLFFAIKNHYTAVGEQLRIVDKEPEEIKGTVVIVPVAGVTTVVQKSIHYAKSLSDQVIAVHVSFDREQEKKFEKRWEELNNGVRLVTLHSSYRSLVHPFDKFLETVEAKAKKEQFSVMVLFPQFITKKRWHTILHNQSAFLLRVRLFWKKDIMVATLPYHFKK

Atome Classification :

(20 SA) .........10........20-........30........40...-.....50........60........70-..-......80........-90........100..-..-...110.......120---...-....130.....--..140---.-.......150----.......160.......170.......180.....-..190.......-200.......210.......220.......230.......240.......250.......260.......270....-...280----.-------.......290....-...300.......310.......320.......330..-.....340.......350.......360....-----...370..--.....380--.........390......-.400.......------..410........420.........430.......440.......450...-----....460...-....470.......480.......490.......----500.......510.......520.......530.......540.......-550.......560.-----......570.......580.......590.----......600.....--
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MYHSIKRFLIGKPLKSQAAGE-QKLTKLKALAMLSSDALSSVAYG-TEQILIILATISAAAFWYSIPIAVGVL-IL-LLALILSYRQIIYAYP-QGGGAYIVSKENLGE-KP-GLIAGGSLLVDYILTV---AVS-ISAGTDAITSAF--PAL-H---D-YHVPIAIFLV----LVIMILNLRGLSESASILAYPVYLFVVALLVLIAV-GLFKLMTGQIDQ-PAHHTSLGTPVAGITLFLLLKAFSSGCSALTGVEAISNAIPAFKNPPARNAARTLAMMGILLAILFSGITVLAYGYG-TAPKP-----D-------ETVVSQIASETFGR-NVFYYVIQGVTSLILVLAANTGFSAFPQLAFNLARDQY-MPRMFTVRGDRLGFSNGIIFLGFASIVLIILF-----GGQTEHLI--PLYAVG----VFIPFTLSQTGMCMKWIK-QK--PKGWIGK------MLI-NSCGALISFM--VLSILFVTKFNVVWPVLIFMPIVVLLFFAIKNHYT-----AVGEQLRIVD-KEPEEIKGTVVIVPVAGVTTVVQKSIHYAKSLSD----QVIAVHVSFDREQEKKFEKRWEELNNGVRLVTLHSSYRSLVHPFDKFLET-VEAKAKKEQFSVMV-----LFPQFITKKRWHTILHNQSAFLLRVRLFWK----KDIMVATLPYHFKK--
43 Fugue 71.4618%-100 - C1 -4U1F - EIF3B_YEAST A:[146-625] PSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEE--DSLVES-RENWSTNYVRFSPKGTY------------------LFSYHQQ--GVT-AWGGPNFDRLRRFYH-PD-VRNSSVSPNEKYLVTF---STEPIIVEEDNEFSPF--TKK-N---E-GH-QLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSL-IVHDATKNFMPL-EA------------------KALKP-----SGIRDFSFAPEGVKLQPFRNGDEP----SVLLAYWTP-------------ETN-----N-------SACTATIAEVPRGR-VLKTVNLVQVSNVTLHWQNQA-----EFLCFNVERHT---------KSGKTQFSNLQICR------------------LTERDI--P----------VEKVELKDSVFEFGWEP-HG--NR-----------------------FV--TISVHEVADMNYA------IPANTIRFYAPETK----------KRWSLVK-EIPKTFANTVSWSP-AGRFVVVG-----------------ALVGPNMRRSDLQFYDMDYPGEKNINDNNDVSASLKDVAHPTYSAATN-ITWDPSGRYVTAWS-----SSLKHKVEHGYKIFNIAGN--------LVK----EDIIAGFKNFAWRPRP
41 Fugue 71.2018%-106 - C2 -4TWA SYP_PLAF7 A:[3-497] -----------MAITSKKI---ENFSDWYTQVIVKSELIEY--YD-ISGCYIL--RPAAYYIWECVQAFFNKE-IK-KLNVENSYFPLF------------VTKNKLEK-EK-NHIEGFSPEVAWVTK------------------------Y-G---D-SNLPEEIAI-------------RPTSETIMYSVFPKWIRSYRDLPLKLN-QWNTVVRWEFKQ-P-------TPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLA----------VPIIKGIKSEGEKFG-GA--------N-------FTSTAEAFISENG------RAIQAATSHYL----GTNFAKMFKIEFE---DEN-EVKQY-VHQTSWGCTT-------RSIGIMIMT-----HGDDKGLV--LPPNVSKYKVVIVPIFYKTTD-----------------EN------AIH-SYCKDIEKIL--KNA-----QINCVYD-----DRASYSPGYKFNHWE-----LRGIPIRIEV-GPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQ----MLVDIHKNLFLKAKKKLDDSIVQVTSFSEVMNALNKKKMVLAPWCEDI-A-TEEEIKKETQRLSLTLSGAMKPLCIPL--------DQPPMPPNMKCFWSGKPAKRWCLFGRSY------
21 HHSearch 69.0215%-149 * C4 *3GIA Y609_METJA A:[3-369] ------------------LKN-KKLSLWEAVSMAVGVMIGASIFSIFGVGAK---IAGRN--LPETFI--LSG-IY-ALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGD-NIITGALSILLWMSYVISI---ALF-AKGFAGYFLPLI--NAPINT--F-NIAITEIGIV----AFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFA-GLITIHPSYVIP----D------LAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKN-VPRAIFISILIVMFVYVGVAISA--IG-NLPIDELIKAS-------ENALAVAAKPFLGN-L-GFLLISIGALFSISSAMNATIYGGANVAYSLAKDGE-LPEFFERKVWFKST-EGLYITSALGVLFALL-------FNMEGVA--SITSAV----FMVIYLFVILSHYILIDE-V-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 Fugue 65.9913%-161 - C4 -3GIA Y609_METJA A:[3-435] -------------LKNKKLSL-WEAVSMAVGVMIGAS------------IFSIFGVGAKIAGRNLPETFILSG-IY-ALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGDNII-TGALSILLWMSYVISI---ALF-AKGFAGYFLPLINAPIN-T---F-NIAITEIGIV----AFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFA-GLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRA----IFISILIVMFVYVGVAISAIGNLPIDELIK-ASENA-----L-------AVAAKPFLGNLGFL-LISIGALFSISSAMNATIYGG-----ANVAYSLAKDGE-LPEFFERKVWFKSTEGLYITSALGVLFALLF--------NMEGVA--SITSAV----FMVIYLFVILSHYI--LI-DE--VGGRKEI------VIF-SFIVVLGVFL--LLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVT-----KRTFSNNMYV-KS------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 65.9914%-156 - C4 -3L1L ADIC_ECO57 A:[7-401] --------------------A-HKVGLIPVTLMVSGAIMGSGVFL-LPANLAS---TGG--IAIYGWLV--TI-IG-ALGLSMVYAKMSFLDP-SPGGSYAYARRCFGP-FL-GYQTNVLYWLACWIGN---IAM-VVIGVGYLSYFF--PIL-KD--PWVLTITCVVVL----WIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVF-GWFWFRGETYMA------------------AIQSTLNVTLWSFIGVESASVAAGVVKNPKR-NVPIATIGGVLIAAVCYVLSTTAI--MG-MIPNAALRV-S-------ASPFGDAARMALGD--TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGL-FPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVS--SVSVIF----TLVPYLYTCAALLLLGHG-HF--GKARPAY------LAV-TTIAFLYCIW--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 61.8116%-181 - C4 -4DJK - GADC_ECOLI A:[12-456] -----------------------QLTLLGFFAITASMVMA--VYE-YPT-F---ATSGF-----SLVFFLLLGGILWFIPVGLCAAEMATVDGW---GVFAWVSNTLGP-RW-GFAAISFGYLQIAIGFIPMLYF-VLGALSYILKW---PAL-NEDPI-TKTIAALIIL----WALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH---------------TFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRD-YPLAMLLLMVAAICLSSVGGLSI--AM-VIPGN-----EINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNL-LPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVI----YLCAYFMLFIGYIVLVLK-HPDLKRTFNIPGGKGVKLVV-AIVGLLTSIM--AFIVSFL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 Fugue 58.7715% -88 * C2 *4JQT ? A:[1-431] -GQTWEPLFNGKNLKG----------------------------------------------WKKLNGKAEYK-IV--------DGAIVGISKMGTPNTFLATTKNYG---------------DFILEF---DFK-IDDGLNS-------------------------------GVQLRSESKKDYQNGRVHGYQFEID--------------------PSK-RAWSGGIYDEARRNWLYPLTL---------------NPAAKTAFKNNAWNKARIEAI-GNSIRTWINGVPCANIWDDMT---P-----S-------GFIALQVHAIGNAS-E-----EGKTVSWKDIRICTTDVERYQTPETEEAPERNMIANTISPREAKEGWAL--------------LW-----DGKTNNGW--RGA--------------KLNAFPEKGWKMED-------GI------LKVMKSGGAESANGGDIVTTRKYKNFILTVDFKITEGANSGVKYFVNPDLNKGEGSAIGCEFQILDDDKHPDAKLGVKGNRKLGSLYDLIPAPEKKPFNKK----DFNTATIIVQ-------DNHVEHWLNGVKLIEYTRN------------TDMWNALVAYSKYKN--------WPNFGNSAEGNILLQDHG------DEVWF----KNVKIKELK-------
9 PsiBlast_PDB 40.2636% -90 - C3 -3ABU KDM1A_HUMAN A:[552-607] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 39.7036% -88 - C3 -2Z3Y KDM1A_HUMAN A:[552-607] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 39.4136% -84 * C3 *4KUM KDM1A_HUMAN A:[553-599] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 39.2836%-119 - C3 -2EJR KDM1A_HUMAN A:[552-607] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 39.2236% -87 - C3 -2Z5U KDM1A_HUMAN A:[552-607] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 38.6836% -95 - C3 -2UXN KDM1A_HUMAN A:[553-599] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 38.4336% -76 - C3 -2X0L KDM1A_HUMAN A:[605-651] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 38.2924%-256 - C3 -1Q77 - Y178_AQUAE A:[5-42] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVLLVLTDAY-SDCEKAITYAVNFSEKLGAELDILAVLE---------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 38.1936% -95 - C3 -2XAF KDM1A_HUMAN A:[723-769] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 38.1336% -78 - C3 -2DW4 KDM1A_HUMAN A:[552-607] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 38.1136% -90 - C3 -4BAY KDM1A_HUMAN A:[557-603] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 37.9836% -74 - C3 -2IW5 KDM1A_HUMAN A:[553-599] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 37.9036% -89 - C3 -2V1D KDM1A_HUMAN A:[601-647] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVGRCLAIL-KGI----FGSS-AVPQP-----K-------ETVVSRWRADPWAR-GSYSYVAAGSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------