@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu04870: (2016-06-08 )
MDELKQPPHANRGVVIVKEKNEAVESPLVSMVDYIRVSFKTHDVDRIIEEVLHLSKDFMTEKQSGFYGYVGTYELDYIKVFYSAPDDNRGVLIEMSGQGCRQFESFLECRKKTWYDFFQDCMQQGGSFTRFDLAIDDKKTYFSIPELLKKAQKGECISRFRKSDFNGSFDLSDGITGGTTIYFGSKKSEAYLCFYEKNYEQAEKYNIPLEELGDWNRYELRLKNERAQVAIDALLKTKDLTLIAMQIINNYVRFVDADENITREHWKTSLFWSDFIGDVGRLPLYVKPQKDFYQKSRNWLRNSCAPTMKMVLEADEHLGKTDLSDMIAEAELADKHKKMLDVYMADVADMVV
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-.--...10........20........30...---.....40-----.--.--.---.-...------..------50--...-.---.-...60........---70.....---.---..80....----....90..--......100......----------.110---....-...120-..-.....130....---...140.......150.......-----160.......170......-.180.......190.......200....------...210.......220.......230-------------...-.-...240-........250......---..-.260.......270.......280.--......290.......300.......310.......320.......330.....----..340..-.....350---------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDELK-Q--PPHANR
G
V
V
I
V
KEKN
E
A
V
E
S
P
L
V
S
M
V
D
Y
---
I
R
VSFK------T--H--
D
---
V
-
D
R
I
------
I
E
------
E
V
--
L
H
L
-
S
---
K
-
D
F
M
T
EKQSG
F
Y
G
Y
---VG
T
Y
E
L
D
---
Y
---
I
K
V
F
Y
SAP----DDNR
G
V
L
I
--
E
MSG
Q
G
C
R
Q
F
E
S
F
L
E
----------
C
R
K
K
---
T
W
Y
D
-
F
F
Q
D
C
M
-QQ-GGS
F
T
R
F
D
L
A
ID---DKKT
Y
F
S
I
P
E
L
L
K
K
AQK
G
E
C
I
S
R
-----
F
R
KSDFNGSFDLSDGITGG-
T
T
I
Y
FGSKKS
E
A
Y
L
C
F
Y
EKNY
E
Q
A
E
KYN------I
P
L
E
ELGDWN
R
Y
E
L
R
LKNE
R
A
Q
V
A
I
D
-------------
A
L
L-K-TK
D
L
T
--
L
I
A
M
Q
I
I
N
N
--
Y
V
RFVD---AD-E
N
I
T
R
E
H
W
K
T
S
L
F
W
S
D
F
IGDVGRL
P
--
L
Y
VK
P
Q
K
D
F
Y
Q
K
S
R
N
W
L
R
NSC
A
P
T
M
K
M
V
L
E
A
D
E
HLGK
T
D
L
S
D
M
I
A
E
A
E
L
A
D
K
H
K
----
K
M
L
D
V
Y
M
-
A
D
V
A
D
MVV---------------------------------------------------------
28
Fugue
87.05
34%
-130
* C9 *
4CIJ
-
?
A:
[1-267]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
G
L
K
P
C
V
D
W
---
L
Q
V
T
F
K
------
T
GQ
D
--
S
---
V
-
K
K
C
------
V
E
K
L
E
K
V
F
E
I
--
L
G
L
-
N
---
E
-
A
E
F
L
P
L
K
N
G
K
Y
G
Y
---
K
Q
G
V
A
F
Q
GNP
V
---
L
A
V
Y
Y
D
G
A
----
D
D
M
-
G
I
H
V
--
E
M
T
G
Q
G
C
R
L
F
E
L
H
T
S
-------------
I
---
N
W
Y
E
-
L
F
Y
R
L
V
-
Y
E
Y
E
V
N
I
T
R
L
D
V
A
V
D
---
D
F
K
G
Y
F
K
I
N
T
L
V
K
K
L
K
D
D
E
V
T
S
R
-----
F
K
K
A
R
H
I
E
N
I
V
I
E
G
G
E
T
I
G
-
H
T
L
Y
F
G
A
P
S
S
D
I
Q
V
R
F
Y
E
K
N
V
Q
M
G
M
D
I
D
------
V
-------
W
N
R
T
E
I
Q
L
R
D
D
R
A
H
V
V
A
Q
-------------
I
I
A
-
D
D
V
L
P
L
G
--
E
I
V
A
G
L
L
R
N
--
Y
I
Q
F
R
T
R
--
K
A
-
T
D
K
N
K
K
R
W
P
L
A
R
F
W
L
N
F
L
G
D
V
Q
P
L
R
--
I
---------------------------------------------------
A
K
----
Q
M
-----------------------------------------------------------------------
21
HHSearch
85.07
33%
-128
- C9 -
4CIJ
-
?
A:
[1-267]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
G
L
K
P
C
V
D
W
---
L
Q
V
T
F
K
------
T
--
G
--
Q
DS-
V
-
K
K
C
V
E
K
L
E
K
V
F
------
E
I
--
L
G
L
-
N
---
E
-
A
E
F
L
P
L
K
N
G
K
Y
G
Y
---
K
Q
G
V
A
F
Q
---
G
NPV
L
A
V
Y
Y
D
G
A
-----
D
D
M
G
I
H
V
--
E
M
T
G
Q
G
C
R
L
F
E
L
H
T
-------------
S
I
---
N
W
Y
E
-
L
F
Y
R
L
V
Y
E
Y
-
E
V
N
I
T
R
L
D
V
A
V
D
---
D
F
K
G
Y
F
K
I
N
T
L
V
K
K
L
K
D
D
E
V
T
S
R
-----
F
K
K
A
R
H
I
E
N
I
V
I
E
G
G
E
T
I
G
-
H
T
L
Y
F
G
A
P
S
S
D
I
Q
V
R
F
Y
E
K
N
V
Q
M
G
M
D
-------------
I
D
V
W
N
R
T
E
I
Q
L
R
D
D
R
A
H
V
V
A
Q
-------------
I
I
A
-
D
D
V
L
P
L
G
--
E
I
V
A
G
L
L
R
N
--
Y
I
Q
F
R
T
---
R
K
A
T
D
K
N
K
K
R
W
P
L
A
R
F
W
L
N
F
L
G
D
V
Q
P
L
R
--
I
A
K
Q
M
------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
83.09
32%
-121
- C9 -
4CIJ
-
?
A:
[2-266]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
L
K
P
C
V
D
W
---
L
Q
V
T
F
K
------
T
--
G
QD
S
---
V
-
K
K
C
------
V
E
K
L
E
K
V
F
E
I
--
L
G
L
-
N
---
E
-
A
E
F
L
P
L
K
N
G
K
Y
G
Y
K
Q
G
V
A
F
Q
G
N
P
---
V
---
L
A
V
Y
Y
D
G
A
----
D
D
-
M
G
I
H
V
--
E
M
T
G
Q
G
C
R
L
F
E
L
H
T
S
----------
I
------
N
W
Y
E
L
F
Y
R
L
V
Y
-
E
Y
-
E
V
N
I
T
R
L
D
V
A
V
D
---
D
F
K
G
Y
F
K
I
N
T
L
V
K
K
L
K
D
D
E
V
T
S
R
-----
F
K
K
A
R
H
I
E
N
I
V
I
E
G
G
E
T
I
G
-
H
T
L
Y
F
G
A
P
S
S
D
I
Q
V
R
F
Y
E
K
N
V
Q
M
G
M
D
I
D
------
V
-------
W
N
R
T
E
I
Q
L
R
D
D
R
A
H
V
V
A
Q
-------------
I
I
A
D
D
-
V
L
P
L
G
--
E
I
V
A
G
L
L
R
N
--
Y
I
Q
F
R
T
R
K
A
T
D
-
K
N
--
K
K
R
W
P
L
A
R
F
W
L
N
F
L
G
D
V
Q
--
P
--
L
R
I
A
K
Q
-----------------------------------------------------------------------------------------------------------------------------
29
Fugue
49.78
16%
-59
- C9 -
4CWC
-
REPD_STAAU (first)
A:
[39-308]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
-
Q
--
P
E
L
S
F
D
A
M
T
I
V
G
N
L
N
K
T
N
A
K
K
L
S
D
F
M
S
T
EPQ
I
R
L
W
D
I
------
L
--
Q
--
T
---
K
-
F
K
A
------
K
A
------
L
Q
--
E
K
V
-
Y
---
I
-
E
Y
D
K
V
K
A
D
S
W
D
R
R
---
N
M
R
V
E
F
N
---
P
---
N
K
L
T
H
E
E
M
----
L
W
L
K
Q
N
I
I
--
D
Y
------------------------------------------
M
E
-
D
D
G
F
T
R
L
D
L
A
F
D
---
F
E
D
D
L
S
D
Y
Y
A
M
T
D
K
A
V
K
-------------
K
T
I
F
Y
G
R
N
G
------
K
P
-
E
T
K
Y
F
G
V
R
D
S
D
R
F
I
R
I
Y
N
K
K
Q
E
R
K
D
N
A
D
------
V
E
-
V
M
S
E
H
L
W
R
V
E
I
E
L
K
R
D
M
V
D
Y
W
N
D
-------------
C
F
-------------------
N
--
D
L
H
I
L
K
---
P
D
-
W
S
S
L
E
K
V
K
D
Q
A
M
I
Y
M
L
I
H
E
E
S
T
W
G
K
--
L
E
R
R
T
K
N
K
Y
R
E
M
L
K
S
I
S
E
I
D
L
T
D
L
M
K
L
T
L
K
E
N
E
K
Q
L
Q
K
Q
I
E
F
W
Q
R
--------------------------------------------------------------------------------------
30
Fugue
47.20
19%
-37
- C6 -
4YDD
9
?
B:
[5-333]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
-
A
--
P
R
---
R
Q
L
T
Y
V
T
D
L
N
K
C
I
G
C
Q
T
C
T
V
A
C
K
---
K
L
W
T
T
G
------
P
--
G
--
Q
DFM
Y
-
W
R
N
------
V
E
------
T
A
PG
L
G
Y
-
P
---
R
-
N
W
Q
T
-
K
G
G
G
Y
K
N
G
---
E
L
Q
K
G
K
I
---
P
---
P
M
I
D
Y
G
I
P
----
F
E
F
D
Y
A
G
R
--
L
F
E
G
K
P
G
R
V
R
P
S
P
T
P
----------
R
S
A
P
---
N
W
------
D
E
D
-
Q
G
-
A
G
E
Y
P
N
-----------
N
S
F
F
Y
L
P
R
M
C
N
H
C
T
K
P
A
C
L
E
A
CPNEA
I
Y
K
R
E
Q
D
G
I
V
V
I
H
Q
D
K
C
K
G
-
A
Q
A
C
V
Q
S
-------
C
P
Y
A
K
P
------
Y
F
------
N
P
L
--------------
T
N
K
A
N
K
C
I
G
-------------
C
F
P
-
R
-
I
E
Q
G
V
AP
A
C
V
A
Q
C
V
G
R
A
M
H
V
G
F
V
D
---
D
V
-
N
S
S
V
Y
K
L
I
K
Q
Y
K
V
A
L
P
L
H
P
E
F
G
T
E
P
N
V
F
Y
V
P
P
V
L
G
P
R
I
E
M
A
N
G
-
E
P
S
T
D
P
K
I
P
L
A
Q
L
E
G
L
F
G
K
Q
V
R
D
V
L
A
I
L
Q
S
E
R
E
K
K
M
K
GLAS
D
L
M
D
V
L
I
G
R
R
S
T
D
M
M
I
SPLT-----------------------------------------------------
31
Fugue
45.65
15%
-100
- C4 -
4XGC
-
?
C:
[1-676]
MQ
P
F
Y
E
E
Y
R
K
A
W
N
Q
I
N
D
H
I
A
D
L
Q
H
R
S
Y
A
R
T
L
E
Q
L
V
D
F
V
V
G
Q
A
E
RDE
V
L
P
T
A
A
L
LTGINQPDH
L
S
Q
F
T
A
L
T
Q
R
L
H
A
Q
RA
A
M
V
C
V
L
Q
SRDCAT
L
K
A
A
V
E
T
L
V
F
G
L
V
E
D
N
A
E
V
E
QLRRSQCT
M
K
Q
L
K
S
W
Y
T
N
N
FDSEQ
K
R
R
Q
L
V
V
I
L
PDFECFN
A
S
V
L
Q
D
L
I
L
I
L
S
A
H
CGSLP
F
V
L
V
L
GVATA
M
T
A
V
H
-
G
T
L
P
Y
H
V
S
S
K
I
R
L
R
V
F
Q
T
Q
A
A
P
T
G
L
N
E
V
L
D
K
---
V
L
L
S
P
K
YA
F
H
L
S
G
--
K
--
T
---
F
-
K
F
L
------
T
H
------
I
F
--
L
Y
Y
-
D
FS
I
H
-
G
F
I
Q
G
F
K
Y
C
L
M
E
H
---
F
F
G
G
N
A
F
---
A
---
L
C
T
D
Y
S
K
A
----
L
G
R
I
K
Q
L
T
--
H
E
D
M
E
T
I
R
R
L
P
S
F
R
P
----------
Y
V
E
----------------
Q
I
-
N
D
C
K
R
I
I
A
V
L
T
D
---
D
D
Y
L
K
K
K
L
P
Q
L
L
R
D
C
-------
L
-----
L
H
F
L
L
F
R
C
S
L
E
F
L
T
E
L
V
G
D
L
P
R
C
P
L
G
K
L
R
R
E
L
Y
V
N
C
L
N
R
A
I
I
S
T
P
E
Y
K
------
E
C
L
Q
M
L
S
F
L
S
K
D
E
F
V
A
K
V
N
R
A
L
E
R
T
E
-------------
Q
F
L
-
V
-
E
E
I
A
P
--
L
------------
E
L
G
E
---
A
C
-
T
A
V
L
R
P
K
L
E
A
I
R
L
A
V
D
E
V
G
--
R
A
L
Q
--
K
T
L
Q
L
I
E
T
Q
I
V
Q
D
H
L
R
A
L
Q
D
A
P
P
I
H
E
L
F
V
F
S
D
----
I
A
T
V
R
R
N
I
I
G
A
P
R
A
A
L
H
T
----
A
L
N
N
P
H
F
-
P
D
L
S
V
V
Y
K
L
H
L
E
C
GRMIN
L
F
D
W
L
Q
A
F
R
S
V
VP
Q
I
Q
A
R
F
T
R
A
V
A
E
L
Q
F
L
GYIKMSKRKTD
H
A
T
R
LTW
22
HHSearch
43.94
17%
-55
- C9 -
4CWC
-
REPD_STAAU (first)
A:
[39-225]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
Q
P
E
L
S
F
D
A
---
M
T
I
V
G
N
------
L
--
N
--
K
---
T
N
A
K
K
------
L
S
------
D
F
--
M
S
T
E
P
---
Q
I
R
L
W
D
I
L
Q
T
K
---
F
---
K
A
K
A
L
Q
E
---
K
---
V
Y
I
E
Y
D
K
V
K
A
D
S
W
D
R
R
N
M
R
V
--
E
F
N
P
N
K
L
T
H
E
E
M
L
-------------------
W
L
K
Q
-
N
I
I
D
Y
M
--
E
-
D
D
G
F
T
R
L
D
L
A
F
D
---
F
E
D
D
L
S
---
D
Y
Y
A
M
T
D
K
-----
A
-----
V
K
K
T
I
F
Y
------
G
R
N
G
K
P
-
E
T
K
Y
F
G
V
R
D
S
D
R
F
I
R
I
Y
N
K
K
Q
E
R
K
D
N
A
D
------
V
E
V
-
M
S
E
H
L
W
R
V
E
I
E
L
K
R
D
M
V
D
Y
W
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
40.67
15%
-61
- C7 -
4AV2
-
PILQ_NEIMB
A:
[226-516]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
N
I
D
F
R
--
K
D
G
K
N
A
G
I
I
E
L
A
A
L
G
F
A
G
Q
P
D
I
S
Q
Q
H
D
H
---
I
I
V
T
L
K
------
N
--
H
--
T
---
L
-
P
T
T
------
L
Q
------
R
S
--
L
D
V
-
A
-----
D
F
K
T
P
----------------
V
Q
---
K
---
V
T
L
K
R
L
N
N
----
D
----
T
Q
L
--
I
I
T
T
A
G
N
W
E
L
V
---------------
N
K
S
---
A
A
P
G
-
Y
F
T
F
Q
V
-
L
F
-
T
G
R
--
K
I
S
L
D
F
Q
---
D
----
V
E
I
R
T
I
L
Q
I
L
A
K
E
S
G
M
---------------
N
I
V
A
S
D
S
V
N
G
K
-
M
T
L
S
L
K
D
V
P
W
D
Q
A
L
D
L
V
M
Q
A
R
N
L
D
M
R
Q
Q
GN
I
V
N
I
A
P
R
D
E
L
L
A
K
D
K
A
F
L
Q
A
E
K
D
I
A
D
L
G
----------------
A
L
-
Y
-
S
Q
N
F
Q
--
L
-------
K
--
Y
K
N
V
E
E
---
F
R
-
S
I
L
R
L
D
N
A
D
T
T
-------------------
G
N
R
N
T
L
I
S
G
R
G
S
V
L
I
D
P
A
T
N
T
L
I
V
T
---
D
T
R
S
V
I
E
K
F
R
K
L
I
D
E
L
D
V
P
A
Q
Q
V
-----------------------------------------------------------------------------
17
PsiBlast_PDB
34.04
25%
9
- C9 -
4CWC
-
REPD_STAAU (first)
A:
[131-255]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
Y
M
-
E
D
-
D
G
-
F
T
R
L
D
L
A
F
D
F
ED
D
L
S
D
Y
Y
A
M
T
D
--
K
A
V
K
K
T
I
F
Y
G
R
-----
N
G
K
P
E
----------------
T
K
Y
F
G
V
R
D
S
D
R
F
I
R
I
Y
N
K
K
Q
E
R
K
D
N
A
D
------
V
E
V
M
S
E
H
L
W
-
R
V
E
I
E
L
K
R
D
M
V
D
Y
W
N
D
CFND
L
H
I
L
K
P
D
WS
S
L
E
-
K
-
V
K
D
Q
A
--
M
I
Y
M
L
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
31.89
27%
-68
- C5 -
2BOL
1
TSP36_TAESA
A:
[73-168]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
M
K
--
E
M
S
A
I
Q
P
R
E
F
H
P
E
L
E
----------
Y
T
Q
P
---
G
E
L
D
-
F
L
K
D
A
Y
-
E
V
-
G
K
D
-
G
R
L
H
F
K
V
Y
---
F
N
V
K
N
F
K
A
E
E
I
T
I
K
A
D
K
N
K
L
V
V
R
-----
A
Q
K
S
V
A
C
G
D
A
A
M
S
E
S
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
30.56
33%
-78
* C8 *
2IBF
-
IPAA_SHIFL
B:
[3-14]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
I
Y
E
K
A
K
E
V
S
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
29.02
34%
-105
- C8 -
2WXW
-
ANGT_HUMAN
A:
[328-380]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
Q
Q
N
S
L
N
W
M
K
K
L
S
P
R
T
I
H
L
T
M
P
Q
L
V
L
Q
G
S
Y
D
L
Q
D
L
L
A
Q
A
E
L
----------------------------------------------------------------------------------
3
PsiBlast_PDB
28.84
34%
-105
- C8 -
2X0B
-
ANGT_HUMAN
B:
[328-380]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
Q
Q
N
S
L
N
W
M
K
K
L
S
P
R
T
I
H
L
T
M
P
Q
L
V
L
Q
G
S
Y
D
L
Q
D
L
L
A
Q
A
E
L
----------------------------------------------------------------------------------
16
PsiBlast_PDB
28.38
30%
-28
- C8 -
4OOG
2
?
C:
[106-178]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
-
E
N
S
N
F
Q
N
G
K
L
K
L
Y
A
D
V
F
E
A
Y
I
G
G
L
---
M
E
D
D
P
R
N
N
L
-
P
K
I
R
K
W
L
R
K
L
A
K
P
V
I
E
E
A
T
R
N
Q
V
A
L
E
K
T
D
K
L
D
M
N
A
K
R
Q
L
----------------------------------------------------------------------------------
24
HHSearch
26.77
67%
-
- C1 -
2JMF
-
B:
[11-16]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-
Q
--
P
P
S
Y
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
26.32
26%
57
- C9 -
4CWE
-
REPD_STAAU (first)
A:
[131-220]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
Y
M
-
E
D
-
D
G
-
F
T
R
L
D
L
A
F
D
F
ED
D
L
S
D
Y
Y
A
M
T
D
--
K
A
V
K
K
T
I
F
Y
G
R
-----
N
G
K
P
E
----------------
T
K
Y
F
G
V
R
D
S
D
R
F
I
R
I
Y
N
K
K
Q
E
R
K
D
N
A
D
------
V
E
V
M
S
E
H
L
W
-
R
V
E
I
E
L
K
R
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
25.94
29%
-21
- C8 -
4MZV
1
EPCAM_HUMAN
A:
[171-236]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
V
-
Q
Q
-
S
S
Q
K
T
Q
N
D
V
D
I
A
---
D
V
A
Y
Y
F
------
E
K
D
V
K
G
E
S
L
F
H
-----
S
K
K
M
D
L
T
V
N
G
E
Q
L
D
L
D
P
G
Q
-
T
L
I
Y
Y
V
D
E
K
A
P
E
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
25.39
11%
-72
- C8 -
3HLZ
3
?
A:
[151-203]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
Y
Q
I
N
E
G
Y
E
W
V
V
S
T
V
K
Q
E
L
K
K
D
F
Q
G
V
E
E
-
D
L
E
K
I
Q
Q
V
I
D
S
G
K
I
S
P
K
K
K
----
D
E
W
L
A
I
-------------------------------------------------------------------
5
PsiBlast_PDB
21.87
28%
-8
- C8 -
1ZB1
-
BRO1_YEAST
A:
[25-124]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
-
K
---
K
-
S
Y
G
S
S
Q
W
R
T
F
Y
D
E
---
K
A
T
S
E
L
D
---
H
---
L
R
----------
N
N
A
N
G
E
L
A
P
S
S
L
S
E
Q
N
L
K
Y
Y
-
S
F
L
E
H
L
Y
F
R
LGSKG
S
R
L
K
MDF
T
W
Y
D
-
A
E
Y
S
S
A
-
Q
K
-
G
L
K
Y
T
Q
H
T
L
A
F
E
---
K
S
C
T
L
F
N
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
20.55
43%
-
- C3 -
2LKW
-
?
A:
[5-11]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
I
V
-
Q
--
P
P
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------