@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu06780: (2016-06-10 )
MASNRYHSINEIMESQLFYQITTPPKKTQKAQYDPEVEKFLEIIEFVKENGREPQKVPTDLTERSLASRLIGIRKDPDRMEYLKEYDEIGLLEVRSKELTIPKISSIDDILKSGLSALLGDNLNNDITRSIFDTSSLQKVTTMPEYVAKRKKIKDFGKFEELFKKCHKEITEGKRKILTFKNEQDIQSNSFYILKGVLLYVEDVGERKKAKGKTNARLRCIFENGTESDMLLRSLSAELYKHGRRVTDNEDTLLDNVREDDVSTGFIYVLKSLSTDPQISSIKNLYKIGFTTGSVENRIRNAENQSTYLYAPVEIVTTYQVFNMNASKFETAIHHALANNNLDVSILGANGKMLVPKEWFVVTLEDLQAVIDEIVMMVHLYD
Atome Classification :
(20 SA)
----------------------------------.........10........-20--........30---......----..40--.......-..-50----.........60.....-..----.-70.......-----------.80.....-....90.........100---........-.110....-------...120.-......130.----...-------...-----.140........150....--------------...160.....-.-.170....-------------------...180.......-190-----------.....------...200.-------.....--------.210-.-------......220.....--..230.......240...-----...----.250.-----......260....---------------...270.....--------..-----280.--.....---.290........-300...----.----.-.--.----310.-----------....---.---.----320-..-....--------.330.......340.....---------------..350-----....---...----360------..----------...-..370.......380-------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------MASNRY
H
S
I
N
E
I
M
E
SQ
L
F
Y
-
Q
I--TTPPKKTQKA---QY
D
P
E
V
----
E
K
F
---
L
E
I
I
E
F
V
-
K
E-N-----GREPQKVP
T
D
L
T
E
R
S
L
-
A
S
----
R
-
L
I
GIRKD
P
D
-----------
R
M
-
E
Y
L
K
E
-
Y
D
EI
G
-
L
L
E
VRSKELT-----IPK
I
S
S
I
D
-
D
I
L
K
S
G
L
S
-------
A
L
L
GDNL-N
N
D
I
T
R
S
-IF----D
T
S
-------
S
L
Q
-----
K
V
-TT
M
P
E
Y
V
A
K
R
K
K
I
K
D
F
--------------
G
K
F
E
E
L
F
K
K
C
H
-
K
-
E
I
T
EGK
R
K
-------------------
I
L
T
FKNEQDIQSN-
S
F
------------
Y
I
L
K
G
------
V
L
L
Y
V
E
D
-------VG
E
R
K
--------KAKG-K-------TN
A
R
L
R
C
I
FENGT
E
--
S
D
M
L
L
R
S
L
S
A
E
L
Y
KHGRR-----VTD----N
E
D
T
L
-----
L
D
N
V
REDDVS
T
G
F
---------------
I
Y
V
L
K
SLSTDP--------
Q
I
-----
S
S
I
K
--
N
L
Y
K
I---GFT-TG
S
V
E
N
R
I
-RNAENQ----
S
----
T
-
Y
--
L
----
Y
A
P
V
-----------
E
I
V
T
---
T
---
Y
----
Q
V
F-NM-
N
A
S
K
--------
F
E
T
A
I
H
H
A
LANNN
L
D
V
S
I
L---------------GANG
K
-----
M
L
VP---K
E
W
----
F
V
V
------
T
L
----------
E
D
L
-
Q
A
V
I
D
E
I
V
M
M
V
HLYD-------------------
32
Fugue
73.54
19%
-55
- C1 -
4YPL
1
?
C:
[5-542]
---------------------------LSDLEAL
R
K
K
I
E
E
V
G
M
P
E
A
V
K
T
K
A
L
K
-
E
L
--
D
R
L
E
R
M
Q
Q
G
S
---
P
E
A
T
V
A
----
R
T
Y
---
L
D
W
L
T
E
V
-
P
W
-
S
-----
K
A
D
P
E
V
L
D
I
N
H
T
R
Q
V
L
-
D
E
----
D
-
H
Y
G
L
K
D
V
K
E
-----------
R
I
L
E
Y
L
A
V
-
R
Q
L
T
Q
-
G
L
D
V
R
N
K
A
P
I
-----
L
V
L
V
G
P
-
P
-
G
V
G
K
T
S
L
G
-------
R
S
I
A
R
S
M
-
N
R
K
F
H
R
I
-
S
L
GGVR
D
E
A
-------
E
I
R
GHRRT
Y
I
-
G
A
M
P
G
K
L
I
H
A
M
K
Q
V
G
V
INPVILLDQIDKMS
S
D
W
R
G
D
P
A
S
A
M
-
L
-
E
V
L
D
P
E
Q
N
NTFTDHYLDVPYDLSKVFF
I
T
T
A
N
T
L
Q
T
I
P
R
P
-
L
L
DRMEVIEIPGYT
N
M
E
K
Q
------
A
I
A
R
Q
Y
L
-------
W
P
K
Q
V
--------
R
E
S
G
-
M
EGRIEVT
D
A
A
I
L
R
V
I
S
E
Y
T
R
E
--
A
G
--
V
R
G
L
E
R
E
L
G
K
I
A
R
K
-----
G
A
K
FWLE
G
A
W
E
G
-----
L
R
T
I
D
A
S
D
I
P
T
Y
L
GIPRYRPDKAETEPQ
V
G
T
A
Q
G
L
A
W
T
P
VGGTLLTI
E
V
-----
A
A
V
P
--
G
S
G
K
L
---
S
L
T
-
G
Q
L
G
E
V
M
K
-
E
S
A
Q
A
A
----
L
----
T
-
Y
--
L
----
R
A
H
T
QDYGLPEDFYN
K
V
D
L
---
H
---
V
----
H
V
P
-
D
G
-
A
T
P
K
DGPSAGIT
M
A
T
A
I
A
S
A
L
S
R
R
P
A
R
M
D
I
A
MTGEVSLRGKVMPIG
G
V
K
E
K
-----
L
L
A
A
---
H
Q
A
GIHK
I
V
L
PKDNEA
Q
L
----------
E
E
L
-
P
K
E
V
L
E
G
L
E
I
K
L
V
E
D
VGEVLEYLLLPEPTMPPVV
34
Fugue
72.05
13%
-70
* C6 *
3UO9
4
GLSK_HUMAN
A:
[67-489]
----------------------------PS
L
E
D
L
L
F
Y
T
I
A
E
G
Q
E
K
I
P
V
H
K
F
I
T
-
A
L
--
K
S
T
G
L
R
T
S
-------
D
P
R
L
----
K
E
C
---
M
D
M
L
R
L
T
-
L
Q
-
T
-----
T
S
D
G
V
M
L
D
K
D
L
F
K
K
C
V
-
Q
S
----
N
-
I
V
L
L
T
Q
A
F
R
RKFVIPD
F
M
S
F
T
S
-
H
I
D
E
L
-
Y
E
S
A
K
-
K
Q
S
G
G
K
V
A
D
Y
-----
I
P
Q
L
A
K
F
S
P
D
L
W
G
V
S
V
C
-------
T
V
D
G
Q
R
H
-
S
T
G
D
T
K
V
-
P
F
----
C
L
Q
-------
S
C
V
-----
K
P
-
L
K
Y
A
I
A
V
N
D
L
G
---------------------
T
E
Y
V
H
R
Y
V
G
-
K
-
E
-
P
S
G
L
R
F
-------------------
N
K
L
F
L
N
E
D
D
K
P
H
N
-
P
M
-------------
V
N
A
G
------
A
I
V
V
T
S
L
-------
I
K
Q
G
V
--------
N
N
A
E
-
K
-------
F
D
Y
V
M
Q
F
L
N
K
M
A
------------------
G
N
E
Y
-----
V
G
F
----
S
N
A
T
F
-----
Q
S
E
R
E
S
G
D
R
N
F
A
I
---------------
G
Y
Y
L
K
E
K
K
C
F
P
--------
E
G
-----
T
D
M
V
--
G
I
L
D
F
---
Y
F
Q
-
L
C
S
I
E
V
T
C
-
E
S
A
S
V
M
----
A
----
A
-
T
--
L
A
N
GG
F
C
P
I
TGE--------
R
V
L
S
---
P
---
E
----
A
V
R
-
N
T
-
L
S
L
M
--------
H
S
C
G
M
Y
D
F
S
G
Q
F
A
F
H
V
G
L
P
---------------
A
K
S
G
V
AG
G
I
L
L
V
V
P
---
N
V
M
----
G
M
M
------
C
W
S
P
PLDKMGNS
V
K
G
-
I
H
F
C
H
D
L
V
S
L
C
N
F
H
N
YDNLRHFAKKLDPRREGE-
37
Fugue
70.98
18%
-68
- C4 -
4U1D
-
EIF3A_YEAST
A:
[6-493]
FR
P
E
N
A
I
K
R
A
D
E
L
I
S
V
GE
K
Q
A
A
L
Q
S
L
H
D
F
I
T
ARR
I
R
W
A
T
P
S
T
V
E
P
V
V
F
K
F
L
E
I
-
G
V
--
E
L
K
K
G
K
L
L
K
D
G
L
H
Q
Y
K
K
L
I
QGS
T
E
G
L
---
V
S
V
G
A
V
A
-
R
K
-
F
-----
I
D
L
V
E
S
K
I
A
S
E
Q
T
R
A
D
-
E
L
----
Q
-
K
Q
E
I
D
A
I
T
S
-----------
W
L
-
R
F
T
W
E
S
Y
R
A
V
L
-
D
L
L
R
N
N
A
L
L
E
-----
I
T
Y
S
G
V
V
K
-
K
T
M
H
F
C
L
K
Y
Q
R
K
N
E
F
K
R
L
A
E
M
L
-
R
Q
H
L
D
A
A
-
N
Y
----
Q
Q
S
K
S
G
N
N
L
V
D
L
S
-----
D
A
-
D
T
L
Q
R
Y
L
D
Q
R
F
Q
Q
V
D
V
--------------
S
V
K
L
E
L
W
H
E
A
Y
-
R
-
S
I
E
D
V
F
H
L
-------------------
M
K
I
S
K
R
A
P
K
P
S
T
L
-
A
N
------------
Y
Y
E
N
L
------
V
K
V
F
F
V
S
G
D
P
L
L
HT
T
A
W
K
K
--------
F
Y
K
L
Y
S
-------
T
N
P
R
A
T
E
E
E
F
K
T
Y
S
--
S
T
I
F
L
S
A
I
S
T
Q
L
D
E
I
P
S
I
-----
G
Y
D
----
P
H
L
R
M
-----
Y
R
L
L
N
L
D
A
K
P
T
-
R
---------------
K
E
M
L
Q
S
I
I
E
D
E
--------
S
I
YGKVD
E
E
L
K
--
E
L
Y
D
I
I
E
V
N
F
D
-
V
D
T
V
K
Q
Q
L
-
E
N
L
L
V
K
L
S
S
-
K
----
T
-
Y
--
F
S
Q
Y
-
I
A
P
L
-----------
R
D
V
I
---
M
---
R
----
R
V
F
-
V
A
-
A
S
Q
K
--------
F
T
T
V
S
Q
S
E
L
Y
K
L
A
T
L
P
A
P
L
---------------
D
L
S
-
A
-----
W
D
I
E
---
K
S
L
----
L
Q
A
------
A
V
----------
E
D
Y
V
S
I
T
I
D
H
E
S
A
K
V
T
F
A
K
-------------------
38
Fugue
66.48
15%
-72
- C3 -
4WGV
-
?
A:
[45-439]
------------------------------------
V
G
Y
M
D
P
G
N
W
I
T
S
M
Q
G
G
A
-
Q
Y
--
G
Y
----------------------
T
L
---
L
F
V
I
L
I
S
-
S
L
-
A
-----
A
M
L
L
Q
S
M
T
V
R
L
G
I
A
T
G
-
K
D
------
L
A
Q
M
T
R
H
F
L
-----------
S
K
-
P
V
A
I
I
-
F
W
I
I
A
-
E
L
A
I
I
A
T
D
I
A
-----
E
V
I
G
S
A
I
A
-
L
D
L
I
F
G
I
P
-------
L
I
V
G
A
L
I
-
T
V
F
D
V
F
L
-
L
L
----
F
I
M
-------
R
F
G
-----
F
R
-
K
I
E
A
I
V
G
T
L
I
F
T
V
L
A
I
--------------
F
V
F
E
V
F
I
S
S
P
Q
L
T
-
D
I
L
N
G
F
V
P
-------------------
H
K
E
I
V
T
N
Q
G
I
L
Y
I
-
A
L
------------
G
I
I
G
A
T
I
M
P
H
N
L
Y
L
H
S
S
I
-------
V
Q
S
R
K
Y
D
R
HDNEE
K
A
Q
A
-
I
-------
K
Y
A
T
I
D
S
N
L
Q
L
S
I
A
F
V
V
N
C
L
L
L
T
L
G
A
A
L
F
F
G
T
K
T
NDLGG
F
Y
D
----
L
Y
H
A
L
K
T
EPV
L
G
A
T
L
G
G
V
M
S
T
L
F
---------------
A
V
A
L
L
A
S
G
Q
N
S
--------
T
I
-----
T
G
T
L
A
G
Q
I
V
M
E
---
G
F
L
-
R
L
S
I
P
N
W
L
-
R
R
L
I
T
R
----
S
----
L
-
A
--
V
----
I
P
V
I
-----------
I
C
L
I
---
I
---
F
KGN
S
E
K
I
-
E
Q
-
L
L
V
F
--------
S
Q
V
F
L
S
I
A
L
P
F
S
L
I
P
L
Q
L
A
---------------
T
S
N
K
K
-----
L
M
G
P
FI
N
K
T
W
----
V
N
I
------
I
S
----------
W
T
L
-
I
V
I
L
S
G
L
N
V
Y
------------------------
35
Fugue
64.06
15%
-108
- C6 -
3L2O
-
FBX4_HUMAN
B:
[55-383]
----------------------------------
A
A
S
-----------------
T
L
--
T
R
L
P
I
D
V
Q
L
Y
---
I
L
S
F
L
------
S
P
---
H
D
L
C
Q
L
G
-
S
T
-
N
-----
H
Y
W
N
E
T
V
R
D
P
I
L
W
R
Y
F
-
L
L
----
R
-
D
------------------------
L
P
S
-
W
S
S
V
D
-
W
K
S
L
P
D
L
E
I
L
-----
K
K
P
I
S
E
V
F
-
F
D
Y
M
A
V
Y
R
-------
M
C
C
P
Y
L
I
-
I
Q
N
E
P
R
F
-
A
M
----
F
G
P
-------
G
L
E
-----
E
L
N
T
S
L
V
L
S
L
M
S
S
E
E
L
C
P
T
--------------
A
G
L
P
Q
-----
R
-
Q
-
I
D
G
I
G
S
G
V
-------------------
N
F
Q
L
N
N
Q
-----
H
-
K
F
------------
N
I
L
I
-----------
L
Y
S
-------
T
T
R
R
Y
--------
S
V
I
------------
P
Q
I
Q
K
V
C
E
V
------------------------------------------------------
V
D
G
F
---------------
I
Y
V
A
N
A
E
A
H
K
R
-----------------------
H
E
W
---
Q
D
E
-
F
S
H
I
M
A
M
T
-
D
P
A
F
G
S
----
S
----
G
-
R
--
P
----
L
L
V
L
-----------
S
C
I
S
---
Q
---
G
----
D
V
K
-
R
M
-
P
C
F
Y
--------
L
A
H
E
L
H
L
N
L
L
N
H
P
W
L
V
Q
D
T
---------------
E
A
E
------------------------------
T
L
----------
T
G
F
-
L
N
G
I
E
W
I
L
E
E
V
E
S
---------------------
19
PsiBlast_PDB
46.80
20%
-4
- C5 -
4DX0
1
1433E_TOBAC
A:
[9-173]
----------------------------------------------------------
S
T
R
E
E
N
V
Y
M
A
---
K
L
A
E
Q
A
----
E
R
Y
---
E
E
M
V
E
F
M
-
E
K
-
V
-----
A
K
T
V
D
V
E
E
L
T
V
E
E
R
N
L
-
L
S
V
A
Y
K
N
-
V
I
G
A
R
R
A
S
W
-----------
R
I
-
I
S
S
I
E
-
Q
K
E
-----
E
S
R
G
N
E
D
H
-----
V
S
S
I
K
E
Y
R
-
G
K
I
E
A
E
L
S
-------
K
I
C
D
G
I
L
-
N
-------
L
L
----
E
S
H
-------
L
I
P
-----
V
A
-
S
T
A
E
S
K
V
F
Y
L
K
M
K
G
D
Y
--------------
H
R
Y
L
A
E
F
K
T
G
A
-
E
-
R
K
E
A
A
E
N
T
-------------------
L
L
A
Y
K
S
A
Q
D
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
44.46
11%
-74
- C2 -
3PFN
14
NADK_HUMAN
A:
[6-361]
-------------------------------------
T
T
F
G
P
K
A
C
V
L
Q
N
P
Q
T
I
M
H
I
--
Q
D
P
A
S
Q
R
L
T
W
---
N
K
S
P
K
S
-------------
V
L
V
I
-
K
K
M
R
-----
D
A
S
L
L
Q
P
F
K
E
L
C
T
H
-
L
M
E
E
----
N
M
I
V
Y
V
E
K
K
V
L
-----------
E
D
-
P
A
I
A
S
-
D
E
S
F
G
-
A
V
K
K
K
F
C
T
F
R
EDYDD
I
S
N
Q
I
D
F
I
-
I
C
L
G
G
D
G
T
-------
L
L
Y
A
S
S
L
F
Q
G
S
V
P
P
V
M
A
F
----
H
L
G
-------
S
L
G
-----
F
L
-
T
P
F
S
-----------
F
--------------
E
N
F
Q
S
Q
V
T
Q
V
I
-
E
G
N
A
A
V
V
L
R
S
-------------------
R
L
K
V
R
V
V
K
Q
---
A
M
Q
Y
------------
Q
V
L
N
E
------
V
V
I
D
----------------------------------------------
R
G
P
S
--
S
Y
L
S
----
N
V
D
V
Y
L
D
G
H
L
-----
I
T
T
----
V
Q
-----------------
G
D
G
V
---------------
I
V
S
T
P
T
G
S
T
A
Y
--------
A
A
-----
A
A
------------
G
A
S
M
I
H
P
N
V
P
A
I
M
I
T
P
I
C
P
----
H
----
S
-
L
--
S
----
F
R
P
I
------------
V
V
P
---
A
---
G
----
V
E
L
-
K
I
M
L
S
P
E
--------
A
R
N
T
A
W
V
S
F
D
G
R
K
R
Q
E
I
R
H
---------------
G
D
S
I
S
-----
I
T
T
S
---
C
Y
P
----
L
P
S
------
I
C
----------
V
R
D
-
P
V
S
D
W
F
E
S
L
A
Q
C
L
H
H
-------------------
22
HHSearch
43.60
22%
-88
- C5 -
4XLG
2
SLX1_CANGA
A:
[8-122]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
D
F
Y
G
---------------
C
Y
L
L
Q
S
I
S
K
--------------------
R
--
Q
S
F
Y
I
---
G
S
T
-
P
-
N
P
V
R
R
L
-
R
Q
H
N
G
S
----
L
----
S
R---
T
KRDG
T
R
P
W
-----------
E
M
V
A
I
V
Y
G
---
F
----
P
S
--
R
I
-
A
A
L
Q
--------
F
Q
H
A
W
Q
H
G
--
T
R
Y
I
-------------------------------------------------------------------------------------------------------
31
Fugue
43.12
28%
-171
- C- -
5E7C
-
?
T:
[1-30]
----------------------------------
M
E
T
I
T
Y
V
F
I
F
A
C
I
I
A
L
F
F
F
-
A
I
FF
R
E
P
P
R
I
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
41.24
24%
-120
- C5 -
1ZG2
-
Y048_BACHD
A:
[6-74]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
H
Y
---------------
V
Y
I
L
E
C
K
----------------------
D
--
G
S
W
Y
T
---
G
Y
T
-
T
-
D
V
D
R
R
I
-
K
K
H
A
S
G
K
GAK
Y
----
T
-
R
--
G
----
R
G
P
F
-----------
R
L
V
A
---
T
---
W
----
A
F
P
S
K
E
-
E
A
M
R
--------
W
E
Y
E
V
K
H
L
-------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
39.96
29%
-23
- C5 -
1NSJ
-
TRPF_THEMA
A:
[62-131]
-------------------------------------------------------------------------
N
E
E
P
----
E
K
I
---
L
D
V
A
S
Y
V
-
Q
L
-
N
AVQLH
G
E
E
P
I
E
L
C
R
K
I
A
E
R
I
L
-
V
I
----
K
-
A
V
G
V
S
N
E
R
D
------------
M
-
E
R
A
L
N
-
Y
R
E
F
P
I
L
L
D
T
K
T
P
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
HHSearch
38.58
25%
-125
- C5 -
1YWL
-
Y2693_ENTFA
A:
[4-74]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
S
H
Y
---------------
F
Y
V
L
L
C
Q
----------------------
D
--
G
S
F
Y
G
---
G
Y
T
-
T
-
E
P
E
R
R
L
-
T
E
H
N
S
G
----
T
GAKY
T
-
R
LA
K
----
R
R
P
V
-----------
I
M
I
H
---
T
---
E
----
K
F
E
T
R
S
-
E
A
T
K
--------
A
E
A
A
F
K
K
--------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
38.22
31%
-
- C5 -
5AI7
-
PARM_ECOLX
A:
[30-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
NIA
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
37.49
31%
-16
- C5 -
4A61
-
PARM_ECOLX
A:
[36-112]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
NIA
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
35.52
31%
-16
- C5 -
3IKY
-
PARM_ECOLX
A:
[30-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
N
I
A
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
35.49
25%
-17
- C5 -
4UP7
-
?
A:
[8-153]
---------------------------------------------
M
L
S
K
Q
L
F
L
-
N
R
--
C
K
D
V
E
E
Y
Q
K
A
---
G
H
N
P
W
P
----
H
K
F
N
V
S
I
T
V
P
E
F
I
A
K
Y
-
S
-----
G
L
E
K
S
Q
V
S
D
D
I
V
--
S
V
-
A
G
----
R
-
V
L
S
K
R
S
S
S
S
-----------
A
L
-
M
F
I
D
L
-
H
D
S
Q
T
-
K
L
Q
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
35.46
25%
-24
- C5 -
4UP9
-
?
A:
[8-165]
---------------------------------------------
M
L
S
K
Q
L
F
L
-
N
R
--
C
K
D
V
E
E
Y
Q
K
A
---
G
H
N
P
W
P
----
H
K
F
N
V
S
I
T
V
P
E
F
I
A
K
Y
-
S
-----
G
L
E
K
S
Q
V
S
D
D
I
V
--
S
V
-
A
G
----
R
-
V
L
S
K
R
S
S
S
S
-----------
A
L
-
M
F
I
D
L
-
H
D
S
Q
T
-
K
L
Q
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
35.44
31%
-16
- C5 -
2QU4
-
PARM_ECOLX
A:
[30-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
N
I
A
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
35.35
31%
-16
- C5 -
1MWK
-
PARM_ECOLX
A:
[30-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
N
I
A
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
35.32
31%
-27
- C5 -
4A6J
-
PARM_ECOLX
A:
[30-94]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
S
F
K
--
R
E
W
A
V
---
S
F
G
-
D
K
K
V
F
N
Y
T
-
L
N
G
E
Q
Y
----
S
----
F
-
D
--
P
----
I
S
P
D
-----------
A
V
V
T
---
T
NIA
W
----
Q
Y
S
-
D
V
-
N
V
------------
V
A
V
H
H
A
L
L
T
S
G
L
P
V
S
----------------------------------------------------------------------------------------------------