@TOME V2.3
(Nov 2016)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu06920: (2016-06-11 )
MTAFKIENETIADGFYACPAVYEDAESITGLLVRTAEWLRDRGSNQWSGLLKGQDIHDITGSIEKGHVFVFKKDEELAAVVMLLPAPSEWDRTLWGDDGHEESIYLHRLAVSRRFAGQGLGARVLQWAETGIHFPEKTRIRLDCVADSDALHSFYRRMGYEFMGADASGYHLFEKEITAE
Atome Classification :
(20 SA)
.........10..-..-----....20.......-.30........40-.-----...-....50..-......60..-------.--.--....70.-.--------..-....80........-90.--.----.---------------...-.--..100....--...110.......120....----....-130........140.......150........-160...-------..-------.-----.170.......180----
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
M
T
A
F
K
IENETIAD-GF-----YAC
P
A
V
Y
E
D
A
E
S
I
-
T
G
L
L
V
R
T
A
E
W
L
R
D-R-----GSN-
Q
W
S
GLLKG-QD
I
H
D
ITGSI-------E--K--
G
H
V
F
V
F
K-K--------DE-E
L
A
A
V
V
M
LLPAPSE-W-D--R----T---------------LWG-D--DGHEE
S
I
Y
L
--
H
R
L
A
V
S
R
R
FAGQ
G
L
G
-
A
R
V
L
----
Q
W
A
E
-T-GIHFPEK
T
R
I
R
L
D
C
VA
D
S
D
A
-
L
H
S
F
Y
R
RM
G
-
Y
E
F
MGA-------DA-------S-----G
Y
H
L
F
E
K
EITAE------
1
PsiBlast_PDB
85.52
35%
-135
- C1 -
2OH1
3
?
A:
[5-179]
-------
N
K
I
T
A
G
-
G
L
E
F
L
V
R
F
A
A
P
T
---
D
R
L
K
I
-
N
D
L
M
I
D
T
A
R
W
L
K
E
-
S
-----
G
S
T
-
Q
W
S
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I
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H
G
-
F
D
V
H
N
I
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Q
R
I
-------
E
--
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--
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E
V
A
L
F
E
-
T
--------
E
A
G
A
L
A
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A
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I
R
K
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P
S
D
-
W
-
D
--
T
----
D
---------------
L
W
E
-
D
--
L
A
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K
A
Y
Y
L
--
H
R
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V
S
R
A
F
S
G
I
S
L
S
-
K
Q
M
I
----
Y
F
A
E
-
K
L
G
I
E
M
S
V
P
F
-
I
R
L
D
C
I
E
S
N
E
T
-
L
N
Q
M
Y
V
R
Y
G
-
F
Q
F
S
G
K
--------
K
-------
N
-----
G
F
Y
L
Y
Q
K
E
L
S
Q
K
------
36
HHSearch
81.67
34%
-138
- C1 -
2OH1
3
?
A:
[8-177]
--------
T
A
G
G
L
-
E
F
-----
L
V
R
F
A
A
P
T
D
R
L
K
I
-
N
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W
L
K
E
-
S
-----
G
S
T
-
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I
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-
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R
I
-------
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--
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--
G
E
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A
L
F
E
T
E
--------
A
G
-
A
L
A
G
A
M
I
I
R
K
T
-
P
S
-
D
W
D
--
T
----
D
---------------
L
W
E
-
D
--
L
A
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K
A
Y
Y
L
--
H
R
I
M
V
S
R
A
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G
I
S
L
S
-
K
Q
M
I
----
Y
F
A
E
-
K
-
L
G
I
E
M
S
V
P
F
I
R
L
D
C
I
E
S
N
E
T
-
L
N
Q
M
Y
V
R
Y
G
-
F
Q
F
S
G
K
-------
K
N
-------------
G
F
Y
L
Y
Q
K
E
L
S
--------
26
Fugue
67.92
17%
-143
- C1 -
2FIA
-
?
A:
[1-157]
---
M
K
I
R
V
-----------------
A
D
E
K
E
L
P
M
I
-
L
Q
F
L
T
E
V
K
A
Y
M
D
V
-
V
-----
G
I
T
-
Q
W
T
K
--
D
Y
-
P
S
Q
G
D
I
Q
E
D
I
-------
T
--
K
--
K
R
L
Y
L
L
V
-
H
--------
E
E
-
M
I
F
S
M
A
T
F
C
M
E
Q
--------------------------------------
E
Q
D
F
V
W
L
--
K
R
F
A
T
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P
N
Y
I
A
K
G
Y
G
-
S
L
L
F
----
H
E
L
E
-
K
-
R
A
V
W
E
G
R
R
K
M
Y
A
Q
T
N
H
T
N
H
R
-
M
I
R
F
F
E
S
K
G
-
F
T
K
I
H
E
S
L
Q
M
NRL
D
F
-------
G
-----
S
F
Y
L
Y
V
K
E
L
E
--------
35
HHSearch
66.43
19%
-130
- C1 -
1TIQ
4
PAIA_BACSU
A:
[2-173]
--------------
S
V
-----
K
M
K
K
C
S
R
E
D
L
Q
T
L
-
Q
Q
L
S
I
E
T
F
N
D
T
F
K
E
Q
N----
S
P
E
-
N
M
K
A
Y
L
E
S
A
F
N
T
E
Q
L
E
K
E
L
-------
S
NM
S
--
S
Q
F
F
F
I
Y
-
F
--------
D
H
-
E
I
A
G
Y
V
K
V
N
-
I
----
D
-
D
--
A
----
Q
----------------
S
E
-
E
--
M
-
G
A
E
S
L
E
I
--
E
R
I
Y
I
K
N
S
F
Q
K
H
G
L
G
-
K
H
L
L
----
N
K
A
I
-
E
-
I
A
L
E
R
N
K
K
N
I
W
L
G
V
W
E
K
N
E
N
-
A
I
A
F
Y
K
K
M
G
-
F
V
Q
T
G
A
-------
H
S
F
Y
M
GD
E
E
Q
-----
T
D
L
I
M
A
K
T
L
I
L
-------
38
HHSearch
64.16
15%
-144
- C1 -
2FIA
-
?
A:
[1-157]
---------------
M
-----
K
I
R
V
A
D
E
K
E
L
P
M
I
-
L
Q
F
L
T
E
V
K
A
Y
M
D
V
-
V
-----
G
I
T
-
Q
W
T
K
D
Y
P
---
S
Q
G
D
I
Q
E
D
I
-------
T
--
K
--
K
R
L
Y
L
L
V
-
H
--------
E
E
-
M
I
F
S
M
A
T
F
C
-
M
----
E
-
Q
-------
E
-------------------------
Q
D
F
V
W
L
--
K
R
F
A
T
S
P
N
Y
I
A
K
G
Y
G
-
S
L
L
F
----
H
E
L
E
-
K
-
R
A
V
W
E
G
R
R
K
M
Y
A
Q
T
N
H
T
N
H
R
-
M
I
R
F
F
E
S
K
G
-
F
T
K
I
H
E
-------
S
L
Q
M
-----
N
RLDF
G
S
F
Y
L
Y
V
K
E
L
E
--------
52
HHSearch
62.93
22%
-116
- C1 -
2PC1
3
?
A:
[14-184]
--------
N
L
Y
F
Q
-
G
M
-----
Q
I
R
L
A
F
P
N
E
I
D
Q
I
-
M
L
L
I
E
E
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A
E
I
A
K
-
T
-----
G
S
D
-
Q
W
Q
K
E
D
G
Y
-
P
N
R
N
D
I
I
D
D
I
-------
L
--
N
--
G
Y
A
W
V
G
I
-
E
--------
D
G
-
M
L
A
T
Y
A
A
V
I
D
G
H
E
E
-
V
-
Y
--
D
A
IYE
G
---------------
K
W
L
-
H
--
D
-
N
H
R
Y
L
T
F
--
H
R
I
A
I
S
N
Q
F
R
G
R
G
L
A
-
Q
T
F
L
----
Q
G
L
I
-
E
-
G
H
K
---
G
P
D
F
R
C
D
T
H
E
K
N
V
T
-
M
Q
H
I
L
N
K
L
G
-
Y
Q
Y
C
G
K
-------
V
P
LD-----
G
-----
V
R
L
A
Y
Q
K
I
K
---------
39
HHSearch
62.01
18%
-181
- C1 -
2B5G
4
SAT1_HUMAN
A:
[2-152]
------------
A
-
K
F
-----
V
I
R
P
A
T
A
A
D
C
S
D
I
-
L
R
L
I
K
E
L
A
K
Y
E
-------------
Q
V
I
--
L
T
E
---
K
D
L
L
E
D
G
F
GEH----
P
--
F
--
Y
H
C
L
V
A
E
-
V
P
KEHWTPE
G
H
-
S
I
V
G
F
A
M
Y
Y
F
T
----
Y
-
D
-------
P
----------------
W
I
-------
G
K
L
L
Y
L
--
E
D
F
F
V
M
S
D
Y
R
G
F
G
I
G
-
S
E
I
L
----
K
N
L
S
-
Q
-
V
A
M
R
C
R
C
S
S
M
H
F
L
V
A
E
W
N
E
P
-
S
I
N
F
Y
K
R
R
G
-
A
S
D
L
S
S
-------
E
E
-------------------------------
42
HHSearch
56.30
17%
-120
- C1 -
1U6M
2
?
A:
[2-176]
---------------
S
-----
L
I
R
S
A
T
K
E
D
G
Q
A
I
-
A
R
L
V
L
V
I
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D
M
E
L
-
P
-----
I
L
E
-
E
V
S
E
E
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----
I
D
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A
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A
T
A
YPTYRY
G
--
Y
--
Q
R
I
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Y
E
-
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--------
A
G
-
E
V
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A
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D
-
E
-
K
II
D
E
---
P
L
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H
GLAEDVR
L
F
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E
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--
E
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N
E
W
Y
L
--
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----
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A
L
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A
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Q
A
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D
N
P
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-
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R
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L
Y
A
S
K
G
-
F
K
D
V
T
T
-------
M
T
-------------------------------
34
HHSearch
55.98
15%
-152
- C1 -
4E0A
3
?
A:
[1-152]
---------------
M
-----
I
I
R
E
A
T
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Q
D
Y
E
E
V
-
A
R
L
H
T
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H
E
A
H
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-
E
-----
R
G
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-------
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GE
K
--
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--------
E
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--
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I
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N
D
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G
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M
R
C
Q
K
Q
-------
T
M
-------------------------------
25
Fugue
55.25
19%
-97
- C1 -
2PC1
3
?
A:
[14-186]
---------
N
L
Y
F
-
Q
G
M
----
Q
I
R
L
A
F
P
N
E
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-------
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Y
A
W
V
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I
-
E
--------
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G
M
L
A
T
Y
A
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V
I
D
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H
E
E
V
-
Y
-
D
--
A
----
I
---------------
Y
E
G
-
K
WL
H
D
N
H
R
Y
L
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F
--
H
R
I
A
I
S
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Q
F
R
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L
A
-
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T
F
L
----
Q
G
L
I
-
E
-
G
---
H
K
G
P
D
F
R
C
D
T
H
E
K
N
V
T
M
Q
-
H
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L
N
K
L
G
-
Y
Q
Y
C
G
K
VP-----
L
D
-------
G
-----
V
R
L
A
Y
Q
K
I
K
E
K
-------
32
Fugue
54.07
15%
-145
* C1 *
4E0A
3
?
A:
[2-157]
---------------------
I
I
R
E
A
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V
Q
D
Y
E
E
V
-
A
R
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R
G
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G-----
E
--
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--
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V
-
D
--------
E
R
-
E
K
I
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A
Y
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I
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V
Q
T
-
P
-
L
--
L
----
P
---------------
T
M
------
Q
Q
R
K
T
V
Y
I
--
S
D
L
C
V
D
E
T
R
R
G
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I
G
-
R
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E
A
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G
K
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Q
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D
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-
A
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H
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M
R
C
Q
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M
------
E
L
-------
P
-----
L
L
----------------
40
HHSearch
53.10
18%
-153
- C1 -
2FE7
-
?
A:
[3-144]
---------------
L
-----
E
I
R
P
A
V
P
A
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A
E
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I
-
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E
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A
-
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-----
H
E
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-
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--
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--
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I
R
R
S
L
F
A
E
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-------
S
--
P
--
T
R
A
L
M
C
L
-
S
--------
E
G
-
R
P
I
G
Y
A
V
F
F
Y
S
---------
Y
----
S
---------------
T
W
L
-
G
-----
R
N
G
I
Y
L
--
E
D
L
Y
V
T
P
E
Y
R
--
G
A
G
-
R
R
L
L
----
R
E
L
A
-
R
-
E
A
V
A
N
D
C
G
R
L
E
W
S
V
L
D
W
N
Q
P
-
A
I
D
F
Y
R
S
I
G
-
A
L
P
Q
D
E
-------
W
V
-------------------------------
33
HHSearch
52.59
15%
-171
- C1 -
2DXQ
5
?
A:
[4-143]
------------
D
-
A
I
-----
S
L
R
A
A
G
P
G
D
L
P
G
L
-
L
E
L
Y
Q
V
L
N
P
S
D
P
------------
E
L
T
T
Q
E
A
----
G
A
V
F
A
A
M
L
-------
A
QP
G
--
L
T
I
F
V
A
T
-
E
--------
N
G
-
K
P
V
A
T
A
T
L
L
I
V
---------
P
----
N
---------------
L
T
R
-
A
--
A
--
R
P
Y
A
F
I
--
E
N
V
V
T
L
E
A
R
R
G
R
G
Y
G
-
R
T
V
V
----
R
H
A
I
-
E
-
T
A
F
G
A
N
C
Y
K
V
M
L
L
T
G
R
H
D
P
A
-
V
H
A
F
Y
E
S
C
G
-
F
V
Q
N
K
T
----------------------------------------
28
Fugue
51.61
14%
-122
- C1 -
2Q7B
2
?
A:
[17-180]
----------
F
Q
G
M
E
I
-----
K
E
Y
E
N
N
P
Y
H
L
A
Q
L
-
V
D
L
I
N
Y
C
Q
N
I
E
A
K
-
L
-----
D
I
K
M
A
E
Q
------
D
D
I
F
Q
I
E
N
Y
Y
-------
Q
--
N
RK
G
Q
F
W
I
A
L
-
E
--------
N
E
-
K
V
V
G
S
I
A
L
L
R
I
D
---------------------------------------
D
K
T
A
V
L
--
K
K
F
F
T
Y
P
K
Y
R
G
N
P
V
R
L
G
R
K
L
----
F
E
R
F
M
L
-
F
A
R
A
S
K
F
T
R
I
V
L
D
T
P
E
K
E
K
R
-
S
H
F
F
Y
E
N
Q
G
-
F
K
Q
I
T
R
-------
D
E
-------
L
-----
D
V
D
Y
I
F
P
D
R
D
S
R
I
Y
V
K
L
L
53
HHSearch
51.19
14%
-160
- C1 -
3H4Q
2
?
A:
[19-187]
---------------
G
-----
M
I
R
L
G
K
M
S
D
L
D
Q
I
-
L
N
L
V
E
E
A
K
E
L
M
K
-----------------
Y
P
---
L
L
E
H
F
E
E
D
I
-------
A
--
K
--
D
Y
L
Y
V
L
E
-
E
--------
N
D
-
K
I
Y
G
F
I
V
V
D
Q
D
-
Q
A
-
E
-
W
YD
D
----
I
---------------
D
W
P
-
V
--
N
-
R
E
G
A
F
V
I
--
H
R
L
T
G
S
K
E
Y
--
K
G
A
A
-
T
E
L
F
----
N
Y
V
I
-
D
-
V
V
K
A
R
G
A
E
V
I
L
T
D
T
F
A
L
N
K
P
-
A
Q
G
L
F
A
K
F
G
-
F
H
K
V
------------------------
P
F
Y
A
Y
Y
K
N
L
K
--------
44
HHSearch
50.89
14%
-177
- C1 -
2AE6
1
?
A:
[4-145]
----------
M
S
T
-
S
L
-----
T
I
R
L
V
A
E
A
D
W
P
A
L
-
H
A
L
D
Q
I
I
----------------------
S
-----
L
A
A
Y
Q
E
K
M
-------
K
--
D
--
E
T
I
F
V
A
I
-
S
--------
G
Q
-
Q
L
A
G
F
I
E
V
H
P
P
------
T
--
S
----
L
-----------------
A
-
A
-----
H
Q
K
Q
W
L
--
L
S
I
G
V
S
P
D
F
Q
D
Q
G
I
G
-
G
S
L
L
----
S
Y
I
K
-
D
-
M
A
E
I
S
G
I
H
K
L
S
L
R
V
M
A
T
N
Q
E
-
A
I
R
F
Y
E
K
H
G
-
F
V
Q
E
A
H
-------
F
K
-------------------------------
43
HHSearch
50.64
12%
-177
- C1 -
1MK4
-
YQJY_BACSU
A:
[1-129]
---------------
M
-----
D
I
R
T
I
T
S
S
D
Y
E
M
V
-
T
S
V
L
N
E
W
W
G
G
--
R
-----------
Q
L
K
E
K
L
P
-----
R
L
F
F
E
H
F
-------
Q
-----
D
T
S
F
I
T
S
-
E
--------
H
N
-
S
M
T
G
F
L
I
G
F
-
Q
----
S
-
Q
--
S
----
D
-------------------------
P
E
T
A
Y
I
--
H
F
S
G
V
H
P
D
F
R
K
M
Q
I
G
-
K
Q
L
Y
----
D
V
F
I
-
E
-
T
V
K
Q
R
G
C
T
R
V
K
C
V
T
S
P
V
N
K
V
-
S
I
A
Y
H
T
K
L
G
-
F
D
I
E
K
G
----------------------------------------
18
PsiBlast_PDB
50.50
25%
-275
- C1 -
3PP9
3
?
A:
[102-163]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
I
--
E
D
I
T
V
D
K
K
Y
R
T
L
G
V
G
-
K
R
L
I
A
Q
A
K
Q
W
A
K
-
E
-
G
----
N
M
P
G
I
M
L
E
T
Q
N
N
N
V
A
-
A
C
K
F
Y
E
K
C
G
-
F
V
I
G
G
F
-------
D
--------------------------------
2
PsiBlast_PDB
50.14
28%
-133
- C1 -
2PC1
3
?
A:
[48-169]
-------------------------------------------------------
G
S
D
-
Q
W
Q
K
E
D
G
Y
-
P
N
R
N
D
I
I
D
D
I
-------
L
--
N
--
G
Y
A
W
V
G
I
-
E
--------
D
G
-
M
L
A
T
Y
A
A
V
I
D
G
H
E
E
V
Y
-
D
--
A
----
I
---------------
Y
E
G
-
K
--
W
L
H
D
N
H
R
Y
L
T
F
H
R
I
A
I
S
N
Q
F
R
G
R
G
L
A
-
Q
T
F
L
----
Q
G
L
I
-
E
-
G
H
K
G
P
D
---
F
R
C
D
T
H
E
K
N
V
T
-
M
Q
H
I
L
N
K
L
G
-
Y
Q
Y
C
G
-----------------------------------------
51
HHSearch
50.02
17%
-144
- C1 -
3FIX
1
PAIA_THEAC
A:
[19-182]
------
Y
F
Q
S
N
A
M
-
S
I
-----
E
I
R
K
L
S
I
E
D
L
E
T
L
-
I
E
V
A
R
E
S
W
K
W
T
Y
A
-
G
IYS
E
E
Y
I
E
-
S
W
I
R
--
E
K
-
Y
S
K
E
K
L
L
N
E
I
V
R
S
Q
---
S
N-
L
D-
I
L
F
L
G
A
F
-
A
--------
D
S
-
T
L
I
G
F
I
E
L
K
-
I
----
I
-----------------------------------
A
N
K
A
E
L
--
L
R
L
Y
L
K
P
E
Y
T
H
K
K
I
G
-
K
T
L
L
----
L
E
A
E
-
K
-
I
M
K
K
K
G
I
L
E
C
R
L
Y
V
H
R
Q
N
S
V
-
G
F
S
F
Y
Y
K
N
G
-
F
K
V
E
D
T
-------
D
G
-------------
S
D
F
I
M
E
K
K
----------