@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu08840: (2016-06-14 )
MKKGLIVLVAVIFLLAGCGANGASGDHKQLKEIRIGIQQSLSPLLIAKEKGWFEDAFEKEGIKVKWVEFQSGPPQFEGLAADKLDFSQVGNSPVIAGQAAGIDFKEIGLSQDGLKANGILVNQNSGIQDVKGLKGKKIAVAKGSSGFDFLYKALDQVGLSANDVTIIQLQPDEAASAFENGSVDAWSIWEPYLSLETMKHGAKILVNGESTDLYSPGFTLVRTKFSEEHPDEVVRFLKVFNKAVVWQKEHLDEAADLYSDIKDLDKKVVENVLKNTEPLNEIISDDIVKAQQETADFQFRTKAIDKKIDVKDVVDNTFIKKALEEHSSGGDQ

Atome Classification :

(20 SA) .........10........20........30........--40-.......----..50........60........70.---........80........90......-..100.......110.....-..120..--....-.-.130.......140------------------------.-.--.-------...-------------------...150.......160.......170-------------------------..--------------------------......180...-.----..-.190.-.....----------.200----.-----.-------------.-....--.-210------..---....-.-..220---........230.......240..---------.....250........260.-.---..--....270...-----.---.-..-280-.........290.......300-........310-.......320.......330------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKKGLIVLVAVIFLLAGCGANGASGDHKQLKEIRIGIQQ--S--LSPLLIA----KEKGWFEDAFEKEGIKVKWVEFQ-S---GPPQFEGLAADKLDFSQVGNSPVIAG-QAAGIDFKEIGLSQDGLKAN-GILV-NQ--NSGI-Q-DVKGLKGKKIAV--------------------------A-K--G-------SSG-------------------FDFLYKALDQVGLSANDVTIIQLQP--------------------------DE--------------------------AASAFENGSVDA-W----SI-WEPYL-SLETM----------KHG-----A-----K-------------I-LVNG--E-S--------TD---LYSP-G-FTLV----RTKFSEEHPDEVVRFLKVFNKAV---------VWQKEH-LDEAADLYSDI-K-D---LD--KKVVENVLKN-----T---E-PL-N---EIISDDIVKAQQETADFQFRT--KAIDKKIDVKD-VVDNTFIKKALEEHSSGGDQ------------------------
21 PsiBlast_CBE 95.1432% 0 - C- -2X26 SSUA_ECOLI B:[5-301] --------------------------------LRIGYQK--G--SIGMVLA----KSHQLLEKRYPES--KISWVEFP-A---GPQMLEALNVGSIDLGSTGDIPPIFA-QAAGADLVYVGVEPPKPKAE-VILV-AE--NSPI-K-TVADLKGHKVAF--------------------------Q-K--G-------SSS-------------------HNLLLRALRQAGLKFTDIQPTYLTP--------------------------AD--------------------------ARAAFQQGNVDA-W----AI-WDPYY-SAALL----------QGG-----V-----R-------------V-LKDG-------------TD---LNQT-GSFYLA----ARPYAEKNGAFIQGVLATFSEAD---------ALTRSQ-REQSIALLAKT-M-G---LP--APVIASYLDH-----R---P-PT-TI--KPVNAEVAALQQQTADLFYEN--RLVPKKVDIRQ-RI------------------------------------------
32 Fugue 95.0332% -76 - C2 -3E4R ? A:[25-315] --------------------------AAEPAQLRIGYQK--A--VSSLVLA----KQHRLLEQRFP--RTKITWVEFP-A---GPQLLEALNVGSIDLGGAGDIPPLFA-QAAGADLLYVGWVPPTPKAE-TILV-PS--KSAL-R-TVADLKGKRIAF--------------------------Q-K--G-------SSA-------------------HNLLLRVLAKSGLSMRDITPLYLSP--------------------------AN--------------------------ARAAFAAGQVDA-W----AI-WDPWY-SALTL----------DGS-----A-----R-------------L-LANG--E-G--------LG----LTG-G-FFLS----SRRYATAWGPFVQQVMGTLNQAD---------GLLERD-RAGSIKTLAQV-S-G---LP--PAVVERTLAH-----R---P-PA-SV--QPLSAQVIKAQQATADLFYAQ--RLLPKRVLVAP-AVWRA-------------PD------------------------
2 PsiBlast_PDB 94.4733% -82 - C2 -3E4R ? A:[30-310] -------------------------------QLRIGYQK--A--VSSLVLA----KQHRLLEQRFPRT--KITWVEFP-A---GPQLLEALNVGSIDLGGAGDIPPLFA-QAAGADLLYVGWVPPTPKAE-TILV-PS--KSAL-R-TVADLKGKRIAF--------------------------Q-K--G-------SSA-------------------HNLLLRVLAKSGLSMRDITPLYLSP--------------------------AN--------------------------ARAAFAAGQVDA-W----AI-WDPWY-SALTL----------DGS-----A-----R-------------L-LANG--E-G--------LG---LTG--G-FFLS----SRRYATAWGPFVQQVMGTLNQAD---------GLLERD-RAGSIKTLAQV-S-G---LP--PAVVERTLAH-----R---P-PA-SV--QPLSAQVIKAQQATADLFYAQ--RLLPKRVLVAP-AV------------------------------------------
1 PsiBlast_PDB 94.4732% -89 - C2 -2X26 SSUA_ECOLI A:[5-284] --------------------------------LRIGYQK--G--SIGMVLA----KSHQLLEKRYPES--KISWVEFP-A---GPQMLEALNVGSIDLGSTGDIPPIFA-QAAGADLVYVGVEPPKPKAE-VILV-AE--NSPI-K-TVADLKGHKVAF--------------------------Q-K--G-------SSS-------------------HNLLLRALRQAGLKFTDIQPTYLTP--------------------------AD--------------------------ARAAFQQGNVDA-W----AI-WDPYY-SAALL----------QGG-----V-----R-------------V-LKDG-------------TD---LNQT-GSFYLA----ARPYAEKNGAFIQGVLATFSEAD---------ALTRSQ-REQSIALLAKT-M-G---LP--APVIASYLDH-----R---P-PT-TI--KPVNAEVAALQQQTADLFYEN--RLVPKKVDIRQ-RI------------------------------------------
4 PsiBlast_PDB 94.1733% -89 - C2 -3KSX ? A:[30-310] -------------------------------QLRIGYQK--A--VSSLVLA----KQHRLLEQRFPRT--KITWVEFP-A---GPQLLEALNVGSIDLGGAGDIPPLFA-QAAGADLLYVGWVPPTPKAE-TILV-PS--KSAL-R-TVADLKGKRIAF--------------------------Q-K--G-------SSA-------------------HNLLLRVLAKSGLSMRDITPLYLSP--------------------------AN--------------------------ARAAFAAGQVDA-W----AI-WDPWY-SALTL----------DGS-----A-----R-------------L-LANG--E-G--------LG---LTG--G-FFLS----SRRYATAWGPFVQQVMGTLNQAD---------GLLERD-RAGSIKTLAQV-S-G---LP--PAVVERTLAH-----R---P-PA-SV--QPLSAQVIKAQQATADLFYAQ--RLLPKRVLVAP-AV------------------------------------------
3 PsiBlast_PDB 93.9033% -87 - C2 -3KSJ ? A:[30-310] -------------------------------QLRIGYQK--A--VSSLVLA----KQHRLLEQRFPRT--KITWVEFP-A---GPQLLEALNVGSIDLGGAGDIPPLFA-QAAGADLLYVGWVPPTPKAE-TILV-PS--KSAL-R-TVADLKGKRIAF--------------------------Q-K--G-------SSA-------------------HNLLLRVLAKSGLSMRDITPLYLSP--------------------------AN--------------------------ARAAFAAGQVDA-W----AI-WDPWY-SALTL----------DGS-----A-----R-------------L-LANG--E-G--------LG---LTG--G-FFLS----SRRYATAWGPFVQQVMGTLNQAD---------GLLERD-RAGSIKTLAQV-S-G---LP--PAVVERTLAH-----R---P-PA-SV--QPLSAQVIKAQQATADLFYAQ--RLLPKRVLVAP-AV------------------------------------------
42 HHSearch 92.8331% -86 - C2 -3KSX ? A:[25-313] --------------------------AAEPAQLRIGYQK--A--VSSLVLA----KQHRLLEQRF--PRTKITWVEFP-A---GPQLLEALNVGSIDLGGAGDIPPLFA-QAAGADLLYVGWVPPTPKAE-TILV-PS--KSAL-R-TVADLKGKRIAF--------------------------Q-K--G-------SSA-------------------HNLLLRVLAKSGLSMRDITPLYLSP--------------------------AN--------------------------ARAAFAAGQVDA-W----AI-WDPWY-SALTL----------DGS-----A-----R-------------L-LANG--E----------GL---GLTG-G-FFLS----SRRYATAWGPFVQQVMGTLNQAD---------GLLERD-RAGSIKTLAQV-S-G---LP--PAVVERTLAH-----R---PPAS-V---QPLSAQVIKAQQATADLFYAQ--RLLPKRVLVAP-AVWRA---------------------------------------
45 HHSearch 91.9930% -79 - C2 -2X26 SSUA_ECOLI A:[2-294] -----------------------------PEALRIGYQK--G--SIGMVLA----KSHQLLEKRY--PESKISWVEFP-A---GPQMLEALNVGSIDLGSTGDIPPIFA-QAAGADLVYVGVEPPKPKAE-VILV-AE--NSPI-K-TVADLKGHKVAF--------------------------Q-K--G-------SSS-------------------HNLLLRALRQAGLKFTDIQPTYLTP--------------------------AD--------------------------ARAAFQQGNVDA-W----AI-WDPYY-SAALL----------QGG-----V-----R-------------V-LKDG--T----------DL---NQTG-S-FYLA----ARPYAEKNGAFIQGVLATFSEAD---------ALTRSQ-REQSIALLAKT-M-G---LP--APVIASYLDH-----R---P-PTTI---KPVNAEVAALQQQTADLFYEN--RLVPKKVDIRQ-RIWQPTQLEGKQ--------------------------------
51 HHSearch 75.5123% -73 - C2 -3UIF ? A:[4-319] ----------------------------DLKVVRIASVAT-NVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAA-MASVGPVINEGFASGKIDFGIYGDLPPIIL-NASKPTVQLVAPWGT-TSNS-YLVV-PK--NSTA-K-SIKDLKGKKIAL--------------------------H-R--G-------RPW-------------------ELAFSNLLQSEGLTFKDFKIVNVNP--------------------------QV--------------------------GAAALASGTVDG-F----FSLFDSYI---LED----------RGV-----G-----K-------------I-IWST--K----------TAPVDWKLM-G-GVWA----RNDFVKQNPEITQAIVTAYLKSV---------HWVAQD-ENKETYIREYSNK-I---YP--ESVNRREYDQ-----DNV-S-WR-QRWSPLYDVALQEHYRKAVAYAQAS--GLTRTQADVQQ-MLNPHFVATALKELKL----------------------------
44 HHSearch 75.1919% -82 - C2 -2DE3 SOXB_RHOSG A:[20-363] --------------------------------DTLTYSNSPV--PNALLTA----SESGFLDA----AGIELDVLSGQ-Q---GTVHFTYDQPAYTRFGGEIPPLLSEGLRAPG-RTRLLGITPL-LGRQ-GFFV-RD--DSPI-T-AAADLAGRRIGV--------------------------S-A--SAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISS--------------------------PGVDVPAEQLEESATVKGADLFPDVARGQAAVLASGDVDA-L----YS-WLPWA-GELQA-----------TG-----A-----R-------------P-VVDL--G-LD-------ER---NAYA-S-VWTV----SSGLVRQRPGLVQRLVDAAVDAG---------LWARDH-SDAVTSLHAAN-L-G---VS--TGAVGQGFGA-----DFQQR-LV-----PRLDHDALALLERTQQFLLTN--NLLQEPVALDQ-WAAPEFLNNSLNR-------------------------------
41 HHSearch 75.0323% -58 - C2 -3QSL ? A:[34-345] -----------------------------KVQIAVGGKP--LIYYLPLTIA----EVKGFFKD----EGLDVSIADFA-G---GSKALQAVVGGSADVVSGAFEHTLSL-QAKGQFYRAFALQGR-APMI-GVGV-SKKNLPGY-K-GPADLKGRKIGV--------------------------TAP--G-------SST-------------------NMVVNFFLAKHGLKASDVSFIGVGAG-------------------------AG--------------------------AVTALRSGQIDA-I----SN-TDPVV-SMLET----------SGD-----I-----Q-------------I-IVDT--R-TLKDTKEIFGG---NMPA-G-CLYA----PQAFVDANPNTAQALTNAIVRAD---------KWIQKAGADEIAKAVPEG-YLL---GD--PAVYKAAIGK-----SM--E-GL-----SPDGVIPEDGAATALKALAAFVPDFDAAKVDPAK-AWTNEYTRRANEKYPN----------------------------
47 HHSearch 74.6319% -88 - C2 -4ESW THI5_CANAW A:[5-311] --------------------------STNKITFLLNWEA--APYHIPVYLA----NIKGYFKD----ENLDIAILEPS-N---PSDVTELVGSGKVDMGLKAMVGTLAA-KARGFPVTSIGSLLD-EPFT-GICY-LE--GSGI-TSDFQSLKGKRIGY--------------------------V----G-------EFG-------------------KIQVDELTKHYGMTPDDYVAVRCGM---------------------------N--------------------------VAKYILEGTIDC-G----IG-IECIQ-QVELEEALK------EQG-----KDSNDAK-------------M-LRIDKLAEL--------GCC--CFCT-I-LYIA----NDKFIAENPQAVKKFLKAIKRAT---------DYMLAH-PREAWAEYGNF-K-PT--MQ--TDLNTKKFQR-----CYA-Y-FS-E---S--LYNVHRDWRKVNNYGKRL--DILPEN--YVP-NYTNEYLSWPEPK-------------------------------
31 Fugue 74.4721% -68 - C2 -3UIF ? A:[2-331] VEDLKVVRIASVATNVGG-------------------KT--V--YAGSASL----VVNGAFPEELRKQGIKVEWVPAAMASV-GPVINEGFASGKIDFGIYGDLPPIIL-NASKPTVQLVAPWGTT-SNS-YLVV-PK--NSTA-K-SIKDLKGKKIAL--------------------------H-R--G-------RPW-------------------ELAFSNLLQSEGLTFKDFKIVNVNP--------------------------QV--------------------------GAAALASGTVDG-FF---SL-FDSYI-LEDRG----------VGK-----I-----I-------------W-STKT--A-P--------VD---W-KLMG-GVWA----RNDFVKQNPEITQAIVTAYLKSV---------HWVAQD-ENKETYIREYSNK-I---YP--ESVNRREYDQDNVSWR---Q-RW-S---PLYDVALQEHYRKAVAYAQAS--GLTRTQADVQQMLN-PHFVATALKELKLEGFWTPNAENLY----------------
38 Fugue 73.8817% -87 - C2 -4ESW THI5_CANAW A:[1-342] GSHMSTNKITFL--------------------LNWEAAP--Y--HIPVYLA----NIKGYFKD----ENLDIAILEPS-N---PSDVTELVGSGKVDMGLKAMVGTLAA-KARGFPVTSIGSLLDEP-FT-GICY-LE--GSGITS-DFQSLKGKRIGY----------------------------V--G-------EFG-------------------KIQVDELTKHYGMTPDDYVAVRCG---------------------------MN--------------------------VAKYILEGTIDC-G----IG-IECIQ-QVELE----------EAL-----K-----EQGKDSNDAKMLRID-KLAE--L-G--------CC---CFCT-I-LYIA----NDKFIAENPQAVKKFLKAIKRAT---------DYMLAH-PREAWAEYGNFKP-T---MQ--TDLNTKKFQR-----C---Y-AY-F---SESLYNVHRDWRKVNNYGKRL--DILPE--NYVP-NYTNEYLSWPEPKEVDDPEKAQDLMLKHQEECKTCGGYKRLVLA
5 PsiBlast_PDB 73.5029% -74 - C2 -3UIF ? A:[33-258] ----------------------------------------------------------GAFPEELRKQGIKVEWVPAA-MASVGPVINEGFASGKIDFGIYGDLPPIIL-NASKPTVQLV--APWGTTSN-SYLVVPK--NSTA-K-SIKDLKGKKIAL--------------------------H-R--G-------RPW-------------------ELAFSNLLQSEGLTFKDFKIVNVNP--------------------------QV--------------------------GAAALASGTVDGFF----SL-FDSYI--LEDR----------GVG-----------K-------------I-IWST--K-TAP------VD---WKLM-G-GVWA----RNDFVKQNPEITQAIVTAYLKSV---------HWVAQ---DENKETY--I-R-E---YS--NKIYPESVNR-----R---E---------------------------------------------------------------------------------------
8 PsiBlast_PDB 73.0624%-101 - C2 -4ESW THI5_CANAW A:[23-249] ----------------------------------------------PVYLA----NIKGYFKD----ENLDIAILEPS-N---PSDVTELVGSGKVDMGLKAMVGTLAA-KARGFPVTSIGSLLDE-PFT-GICY-LE--GSGITS-DFQSLKGKRIGY--------------------------V----G-------EFG-------------------KIQVDELTKHYGMTPDDYVAVRCGM--------------------------NV--------------------------AKYILE-GTIDC-GIGIECI-QQVEL-EEALK----------EQGKDSNDA-----K-------------M-LRID--K-L--------AE---LGCC-C-FCTILYIANDKFIAENPQAVKKFLKAIKRAT---------DYMLAH-PREAWAEYGNF-K--------------------------------------------------------------------------------------------------------------------
33 Fugue 72.1819% -80 - C2 -2DE3 SOXB_RHOSG A:[20-363] --------------------------------DTLTYSN--SPVPNALLTA----SESG----FLDAAGIELDVLSGQ-Q---GTVHFTYDQPAYTRFG--GEIPPLLS-EGLRAPGRTRLLGITPLLGRQGFFV-RD--DSPI-T-AAADLAGRRIGVSASAIRILRGQLGDYLELDPWRQTLVA-L--G-------SWE-------------------ARALLHTLEHGELGVDDVELVPISSPGVDVPAEQLEESATVKGADLFPDVARG--------------------------QAAVLASGDVDA-L----YS-WLPWA-GELQA----------TGA-----R-----P-------------V-VDLG--L-D--------ER---NAYA-S-VWTV----SSGLVRQRPGLVQRLVDAAVDAG---------LWARDH-SDAVTSLHAAN-L-G---VS--TGAVGQGFGADF---Q---Q-RL-V---PRLDHDALALLERTQQFLLTN--NLLQEPVALDQ-WAAPEFLNNSLNR-------------------------------
50 HHSearch 70.5915% -89 * C2 *3IX1 THIY_BACHD A:[3-300] ----------------------------ETVEVMLDWYP--NAVHTFLYVA----IENGYFAE----EGLDVDIVFPT-N---PTDPIQLTASGAIPLALSYQPDVILA-RSKDLPVVSVASVVR-SPLN-HVMF-LA--EQDF-D-SPADLVGLTVGY--------------------------P-G--I-------PVN-------------------EPILKTMVEAAGGDYEQVHLMDVGF---------------------------E--------------------------LGASIVSGRADA-V----VG-TYINHEYPVLK----------HEG-----H-----D-------------ISYFNP--VDY--------GVP--EYDE-L-VLIS----NEAYVEESGEVLAAFWRAALKGY---------EWMVEN-PDEALNVLLTN-Q-DEANFPLIQEVEEESLSI-----LLE-K-ME-NPN-GPFGGQDAESWEEVISWLDAH--DWLEQPVVAED-AFSSI---------------------------------------
7 PsiBlast_PDB 70.2425%-104 - C2 -4ESX - THI5_CANAW A:[20-246] ----------------------------------------------PVYLA----NIKGYFKD----ENLDIAILEPS-N---PSDVTELVGSGKVDMGL-AMVHTLAA-KARGFPVTSIGSLLDE-PFT-GICY-LE--GSGITS-DFQSLKGKRIGY--------------------------V-GEFG-------KIQ-------------------VDELTK---HYGMTPDDYVAVRCGM--------------------------NV--------------------------AKYILE-GTIDC-GIGIECI-QQVEL-EEALK----------EQGKDSNDA-----K-------------M-LRID--K-L--------AE---LGCC-C-FCTILYIANDKFIAENPQAVKKFLKAIKRAT---------DYMLAH-PREAWAEYGNF-K--------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 68.5323%-103 - C2 -4H6D - THI5_YEAST F:[20-253] ----------------------------------------------PIFLA----QTKGYFKE----QGLDMAILEPT-N---PSDVTELIGSGKVDMGLKAMIHTLAA-KARGFPVTSVASLLDE-PFT-GVLY-LK--GSGITK-SFQSLKGKKIGY--------------------------V----G-------EFG-------------------KIQIDELTKHYGMKPEDYTAVRCGM--------------------------NV--------------------------AKYIIE-GKIDA-G-----------I-GIECMQQVELEEYLAKQGRPASDA-----K-------------M-LRID--K-----------------CC-C-FCTVLYICNDEFLKKNPEKVRKFLKAIKKATDYVLADPVKAW-KEY-IDFKPQLNNDL----------------------------------------------------------------------------------------------------------------------