@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu10630: (2016-06-16 )
MNIPKPADSTWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRLLVVTFTNASAAEMKHRIAEALEKELVQRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKYYYLIDLDPGFRIADQTEGELIGDEVLDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTKAPGGPAPRADNFLDDLAQIDELIQHQDDFSELYKRVPAVSFKRAKAVKGDEFDPALLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAKQEKSIIDFSDLEHYCLAILTAENDKGEREPSEAARFYQEQFHEVLVDEYQDTNLVQESILQLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNKNFRSRADILDSTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLIDNAEDTDASEEAEELETVQFEAKAIAKEIRKLISSPFKVYDGKKKTHRNIQYRDIVILLRSMPWAPQIMEELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSLIRLENKKAPYYEAMKDYLAAGDRSDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRDTKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLEFPVVFVAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLRISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQTDWLLPEFDRYQARTYLDFIGPALARHRDLGDLAGVPAHADISGHPARFAVQMIHSYDLLDDDLEERMEEKSERLEAIRRGEPVPGSFAFDEKAREQLSWTYPHQEVTQIRTKQSVSEIKRKREYEDEYSGRAPVKPADGSILYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVPSIEEAEQTVHRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKEIYPDAHEADEPLLVQGIIDCLYETEDGLYLLDYKSDRIEGKFQHGFEGAAPILKKRYETQIQLYTKAVEQIAKTKVKGCALYFFDGGHILTL
Atome Classification :
(20 SA)
.........10........20........30........40.......------.50........60........70........80........90---------------------........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310------------------------.....----...320--.......-------..330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490..----.....500........510-...----....520.......530.......540.......550.......560......----.570.........580.......590.......600......-.610.-.......620.......630.......640.......650......-.660..-...--.--.670.......680..--.....690.......700.......710.......720.......--730--..--.......740--.........750-..----.---..-....760.......770--.-.-.....780....--...790.......800.......-----810.......820........830.......840.-......850...---....860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970....-...980.......990.......1000......1010......1020......1030......1040..-------------.---...1050......1060......1070......1080......1090......1100......1110......---1120........1130......1140.-----------------.....1150----------------.......1160......1170......1180..--...-..1190......1200......1210....--------..1220.------------------.....1230-----
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MNIPKPADSTWTD
D
Q
W
N
A
I
V
STGQ
D
I
L
V
A
A
AAGSG
K
T
A
V
L
V
E
R
M
I
R
K
I
------TAEENPID
V
D
R
L
L
V
V
T
FTN
A
S
A
A
E
M
K
H
R
I
A
E
A
L
E
K
E
L
V
QRPG
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
Q
V
L
K
KY
Y
Y
L
I
DLDPGFRIADQTEGELI
G
D
E
V
L
D
E
L
F
E
D
E
YAK
G
E
K
A
F
F
E
L
V
D
R
YTTDRHD
L
D
L
Q
F
L
V
K
Q
V
Y
E
Y
SRSHP
N
P
E
A
W
L
E
S
F
V
H
L
YDVS
E
K
S
A
I
E
EL
P
F
Y
Q
Y
V
K
E
D
I
A
M
V
L
N
G
A
K
E
K
L
L
R
A
L
E
LTKAPGGPAPR
A
D
N
F
L
D
D
L
A
Q
I
D
E
L
I
Q
H
Q
D
D
F
S
E
L
Y
K
RVPAVSFKRAKAVKGDEF
D
P
A
L
L
D
E
A
T
D
L
R
N
G
-------------------------
A
K
K
L
L
----
E
K
L
K
----
T
D
YFTR
S
-------
P
E
Q
H
L
K
S
L
A
E
M
K
P
V
I
E
T
L
V
Q
L
V
I
SY
G
K
R
F
E
A
A
K
Q
EKSII
D
F
S
D
L
E
H
Y
C
L
A
I
L
T
AENDKGER
E
P
S
E
A
A
R
F
Y
Q
E
Q
F
H
E
V
L
V
D
EYQD
T
N
L
V
Q
E
S
I
L
Q
L
V
TSGPEETG
N
L
F
M
VG
D
V
K
Q
S
I
Y
R
F
RLA
E
P
L
L
F
L
S
K
Y
K
R
F
TESGEGTG
R
K
I
DLNKNF
R
S
R
A
DILDS
T
N
F
L
F
K
Q
----
L
MGGKIG-EVDYDEQA
E
L
K
-LGA----AYPDNDET
E
T
E
L
L
L
I
DNAEDTDA
S
E
E
A
E
E
L
E
T
V
Q
F
E
A
K
A
I
A
K
E
I
R
K
L
I
SSPFK----VY--DGKKKTHRNI
Q
Y
R
D
I
V
I
L
L
RSMPW
A
P
Q
I
M
E
E
L
R
AQG
I
P
-
V
Y
-
A
N-LTS
G
Y
F
E
A
V
E
V
A
V
A
L
S
V
L
K
V
IDNPYQDI
P
L
A
S
V
L
RSPIVGADEN
E
L
-
S
L
I
R
LE-NKK--A--
P
Y
Y
E
A
M
K
D
Y
L
AAGD
R
S
--
D
E
L
Y
Q
K
L
N
T
F
Y
G
H
L
Q
K
W
R
A
FSKNH
S
V
S
E
L
I
W
E
V
Y
RDT
K
Y
M
D
YVGG--M----PG--GKQRQA
N
L
----
R
V
L
Y
D
R
A
R
Q
Y
---
E
S
----
T
---
A
F
-
R
G
L
F
R
F
L
R
F
I
E
R
M
Q
ERG--D-D-LG
T
A
RALS
E
Q
E
D
--
V
V
R
L
M
T
IHSSKGLEF
P
V
V
F
V
AGL-----GRNF
N
M
MDLN
K
-
S
YLLDKELGFGTKYIH
P
Q
L
R
ISY-PTL
P
L
I
A
M
K
K
K
M
---
R
R
E
L
L
S
E
E
L
R
V
L
Y
V
A
L
TRAK
E
K
L
F
L
I
GS
C
K
D
H
Q
K
Q
L
A
K
W
QASASQTDWLLPE
F
D
R
Y
Q
A
R
T
Y
L
D
F
I
G
P
A
L
A
RHRDL
G
D
LAGVPAHADISG
H
P
A
R
F
A
V
Q
M
I
H
S
YDLL
D
D
D
L
E
E
R
M
E
E
K
S
E
R
L
E
-
A
I
RRGEPVPGSFAF
D
E
K
A
R
E
QLSWTY
P
H
Q
E
V
T
Q
I
R
T
K
Q
S
V
S
E
I
K
R
K
R
E
Y
E
D
EYSGRAPVKPADG
S
I
L
Y
R-------------R---
P
A
F
M
M
K
KGLTAAEK
G
T
A
M
H
T
V
M
Q
HIPLSHVP
S
I
E
E
A
E
Q
T
V
H
R
L
Y
E
K
E
L
L
T
E
E
QKDAI
D
I
E
E
I
V
Q
F
F
H
T
EIG
G
Q
---
L
I--GAKWKDREI
P
F
SLAL
P
A
K
E
IYPD-----------------AHEADE
P
L
-----------------
L
V
Q
G
I
I
D
C
L
YETED
G
L
Y
L
L
DYKSDRI
E
G
K
F
-QH--GFE-G
A
A
P
I
L
K
K
R
Y
E
T
Q
I
Q
L
Y
T
K
A
V
E
Q
I
A
K
TKVK--------
G
C
A
L
Y
F
F------------------DG
G
H
I
L
TL------
3
PsiBlast_PDB
68.88
99%
-102
- C1 -
4CEJ
2
ADDA_BACSU
A:
[10-1232]
---------
T
W
T
D
D
Q
W
N
A
I
V
S
T
G
Q
D
I
L
V
A
A
A
A
G
S
G
K
T
A
V
L
V
E
R
M
I
R
K
I
------
T
A
E
E
N
P
I
D
V
D
R
L
L
V
V
T
F
T
N
A
S
A
A
E
M
K
H
R
I
A
E
A
L
E
K
E
L
V
Q
R
P
G
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
Q
V
L
K
K
Y
Y
Y
L
I
D
L
D
P
G
F
R
I
A
D
Q
T
E
G
E
L
I
G
D
E
V
L
D
E
L
F
E
D
E
Y
A
K
G
E
K
A
F
F
E
L
V
D
R
Y
T
T
D
R
H
D
L
D
L
Q
F
L
V
K
Q
V
Y
E
Y
S
R
S
H
P
N
P
E
A
W
L
E
S
F
V
H
L
Y
D
V
S
E
K
S
A
I
E
E
L
P
F
Y
Q
Y
V
K
E
D
I
A
M
V
L
N
G
A
K
E
K
L
L
R
A
L
E
L
T
K
A
P
G
G
P
A
P
R
A
D
N
F
L
D
D
L
A
Q
I
D
E
L
I
Q
H
Q
D
D
F
S
E
L
Y
K
R
V
P
A
V
S
F
K
R
A
K
A
V
K
G
D
E
F
D
P
A
L
L
D
E
A
T
D
L
R
N
G
-------------------------
A
K
K
L
L
----
E
K
L
K
----
T
D
Y
F
T
R
S
-------
P
E
Q
H
L
K
S
L
A
E
M
K
P
V
I
E
T
L
V
Q
L
V
I
S
Y
G
K
R
F
E
A
A
K
Q
E
K
S
I
I
D
F
S
D
L
E
H
Y
C
L
A
I
L
T
A
E
N
D
K
G
E
R
E
P
S
E
A
A
R
F
Y
Q
E
Q
F
H
E
V
L
V
D
E
Y
Q
D
T
N
L
V
Q
E
S
I
L
Q
L
V
T
S
G
P
E
E
T
G
N
L
F
M
V
G
D
V
K
Q
S
I
Y
R
F
R
L
A
E
P
L
L
F
L
S
K
Y
K
R
F
T
E
S
G
E
G
T
G
R
K
I
D
L
N
K
N
F
R
S
R
A
D
I
L
D
S
T
N
F
L
F
K
Q
----
L
M
G
G
K
I
G
-
E
V
D
Y
D
E
Q
A
E
L
K
-
L
G
A
----
A
Y
P
D
N
D
E
T
E
T
E
L
L
L
I
D
------------
E
L
E
T
V
Q
F
E
A
K
A
I
A
K
E
I
R
K
L
I
S
S
P
F
K
----
V
Y
--
D
G
K
K
K
T
H
R
N
I
Q
Y
R
D
I
V
I
L
L
R
S
M
P
W
A
P
Q
I
M
E
E
L
R
A
Q
G
I
P
-
V
Y
-
A
N
-
L
T
S
G
Y
F
E
A
V
E
V
A
V
A
L
S
V
L
K
V
I
D
N
P
Y
Q
D
I
P
L
A
S
V
L
R
S
P
I
V
G
A
D
E
N
E
L
-
S
L
I
R
L
E
-
N
K
K
--
A
--
P
Y
Y
E
A
M
K
D
Y
L
A
A
G
D
R
S
--
D
E
L
Y
Q
K
L
N
T
F
Y
G
H
L
Q
K
W
R
A
F
S
K
N
H
S
V
S
E
L
I
W
E
V
Y
R
D
T
K
Y
M
D
Y
V
G
G
--
M
----
P
G
--
G
K
Q
R
Q
A
N
L
----
R
V
L
Y
D
R
A
R
Q
Y
---
E
S
----
T
---
A
F
-
R
G
L
F
R
F
L
R
F
I
E
R
M
Q
E
R
G
--
D
-
D
-
L
G
T
A
R
G
L
S
E
Q
E
D
--
V
V
R
L
M
T
I
H
S
S
K
G
L
E
F
P
V
V
F
V
A
G
L
-----
G
R
N
F
N
M
M
D
L
N
K
-
S
Y
L
L
D
K
E
L
G
F
G
T
K
Y
I
H
P
Q
L
R
I
S
Y
-
P
T
L
P
L
I
A
M
K
K
K
M
---
R
R
E
L
L
S
E
E
L
R
V
L
Y
V
A
L
T
R
A
K
E
K
L
F
L
I
G
S
C
K
D
H
Q
K
Q
L
A
K
W
Q
A
S
A
S
Q
T
D
W
L
L
P
E
F
D
R
Y
Q
A
R
T
Y
L
D
F
I
G
P
A
L
A
R
H
R
D
L
--------
H
A
D
I
S
G
H
P
A
R
F
A
V
Q
M
I
H
S
Y
D
L
L
D
----
E
R
M
E
E
K
S
E
R
L
E
-
A
I
R
R
G
E
P
V
P
G
S
F
A
F
D
E
K
A
R
E
Q
L
S
W
T
Y
P
H
Q
E
V
T
Q
I
R
T
K
Q
S
V
S
E
I
K
R
----------------------
Y
R
-------------
R
---
P
A
F
M
M
K
K
G
L
T
A
A
E
K
G
T
A
M
H
T
V
M
Q
H
I
P
L
S
H
V
P
S
I
E
E
A
E
Q
T
V
H
R
L
Y
E
K
E
L
L
T
E
E
Q
K
D
A
I
D
I
E
E
I
V
Q
F
F
H
T
E
I
G
G
Q
---
L
I
--
G
A
K
W
K
D
R
E
I
P
F
S
L
A
L
P
A
K
E
I
Y
P
D
-----------------
A
H
E
A
D
E
P
L
-----------------
L
V
Q
G
I
I
D
C
L
Y
E
T
E
D
G
L
Y
L
L
A
Y
K
S
D
R
I
E
G
K
F
-
Q
H
--
G
F
E
-
G
A
A
P
I
L
K
K
R
Y
E
T
Q
I
Q
L
Y
T
K
A
V
E
Q
I
A
K
T
K
V
K
--------
G
C
A
L
Y
F
F
------------------
D
G
G
H
I
L
T
L
------
50
Fugue
68.36
97%
-105
* C1 *
3U4Q
-
ADDA_BACSU
A:
[10-1232]
---------
T
W
T
D
D
Q
W
N
A
I
V
S
T
G
Q
D
I
L
V
A
A
A
A
G
S
G
K
T
A
V
L
V
E
R
M
I
R
K
I
------
T
A
E
E
N
P
I
D
V
D
R
L
L
V
V
T
F
T
N
A
S
A
A
E
M
K
H
R
I
A
E
A
L
E
K
E
L
V
Q
R
P
G
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
Q
V
L
K
K
Y
Y
Y
L
I
D
L
D
P
G
F
R
I
A
D
Q
T
E
G
E
L
I
G
D
E
V
L
D
E
L
F
E
D
E
Y
A
K
G
E
K
A
F
F
E
L
V
D
R
Y
T
T
D
R
H
D
L
D
L
Q
F
L
V
K
Q
V
Y
E
Y
S
R
S
H
P
N
P
E
A
W
L
E
S
F
V
H
L
Y
D
V
S
E
K
S
A
I
E
E
L
P
F
Y
Q
Y
V
K
E
D
I
A
M
V
L
N
G
A
K
E
K
L
L
R
A
L
E
L
----------
T
D
N
F
L
D
D
L
A
Q
I
D
E
L
I
Q
H
Q
D
D
F
S
E
L
Y
K
R
V
P
A
V
S
------------
D
P
A
L
L
D
E
A
T
D
L
R
N
G
-------------------------
A
K
K
L
L
----
E
K
L
K
----
T
D
Y
F
T
R
S
-------
P
E
Q
H
L
K
S
L
A
E
M
K
P
V
I
E
T
L
V
Q
L
V
I
S
Y
G
K
R
F
E
A
A
K
Q
E
K
S
I
I
D
F
S
D
L
E
H
Y
C
L
A
I
L
T
---
A
E
N
D
R
E
P
S
E
A
A
R
F
Y
Q
E
Q
F
H
E
V
L
V
D
E
Y
Q
D
T
N
L
V
Q
E
S
I
L
Q
L
V
T
S
G
P
E
E
T
G
N
L
F
M
V
G
D
V
K
Q
S
I
Y
R
F
R
L
A
E
P
L
L
F
L
S
K
Y
K
R
F
T
E
S
G
E
G
T
G
R
K
I
D
L
N
K
N
F
R
S
R
A
D
I
L
D
S
T
N
F
L
F
K
Q
----
L
M
G
G
K
I
G
-
E
V
D
Y
D
E
Q
A
E
L
K
-
L
G
A
----
A
Y
P
D
N
D
E
T
E
T
E
L
L
L
I
D
L
-------------
E
T
V
Q
F
E
A
K
A
I
A
K
E
I
R
K
L
I
S
S
P
F
K
----
V
Y
--
K
---
K
T
H
R
N
I
Q
Y
R
D
I
V
I
L
L
R
S
M
P
W
A
P
Q
I
M
E
E
L
R
A
Q
G
I
P
-
V
Y
-
A
N
-
L
T
S
G
Y
F
E
A
V
E
V
A
V
A
L
S
V
L
K
V
I
D
N
P
Y
Q
D
I
P
L
A
S
V
L
R
S
P
I
V
G
A
D
E
N
E
L
-
S
L
I
R
L
E
-
N
K
K
--
A
--
P
Y
Y
E
A
M
K
D
Y
L
A
A
G
D
R
S
--
D
E
L
Y
Q
K
L
N
T
F
Y
G
H
L
Q
K
W
R
A
F
S
K
N
H
S
V
S
E
L
I
W
E
V
Y
R
D
T
K
Y
M
D
Y
V
G
G
--
M
----
P
G
--
G
K
Q
R
Q
A
N
L
----
R
V
L
Y
D
R
A
R
Q
Y
---
E
S
----
T
---
A
F
-
R
G
L
F
R
F
L
R
F
I
E
R
M
Q
E
R
G
--------------
D
Q
E
D
--
V
V
R
L
M
T
I
H
S
S
K
G
L
E
F
P
V
V
F
V
A
G
L
-----
G
R
N
F
N
M
M
D
L
N
K
-
S
Y
L
L
D
K
E
L
G
F
G
T
K
Y
I
H
P
Q
L
R
I
S
Y
-
P
T
L
P
L
I
A
M
K
K
K
M
---
R
R
E
L
L
S
E
E
L
R
V
L
Y
V
A
L
T
R
A
K
E
K
L
F
L
I
G
S
C
K
D
H
Q
K
Q
L
A
K
W
Q
A
S
A
S
Q
T
D
W
L
L
P
E
F
D
R
Y
Q
A
R
T
Y
L
D
F
I
G
P
A
L
A
R
H
R
H
----------
A
D
I
S
G
H
P
A
R
F
A
V
Q
M
I
H
S
Y
D
S
E
R
L
E
A
I
R
R
G
E
P
V
F
A
-----------------
F
D
E
K
A
R
E
Q
L
S
W
T
Y
P
H
Q
E
V
T
Q
I
R
T
K
Q
S
V
S
D
E
Y
S
G
R
--------------------
Y
R
-------------
R
---
P
A
F
M
M
K
K
G
L
T
A
A
E
K
G
T
A
M
H
T
V
M
Q
H
I
P
L
S
H
V
P
S
I
E
E
A
E
Q
T
V
H
R
L
Y
E
K
E
L
L
T
E
E
Q
K
D
A
I
D
I
E
E
I
V
Q
F
F
H
T
E
I
G
G
Q
---
L
I
--
G
A
K
W
K
D
R
E
I
P
F
S
L
A
L
P
A
K
E
I
Y
P
D
-----------------
A
H
E
A
D
E
P
L
-----------------
L
V
Q
G
I
I
D
C
L
Y
E
T
E
D
G
L
Y
L
L
A
Y
K
S
D
R
I
E
G
-------
G
F
E
-
G
A
A
P
I
L
K
K
R
Y
E
T
Q
I
Q
L
Y
T
K
A
V
E
Q
I
A
K
T
K
V
K
--------
G
C
A
L
Y
F
F
------------------
D
G
G
H
I
L
T
L
------
2
PsiBlast_PDB
67.52
99%
-106
- C1 -
3U4Q
-
ADDA_BACSU
A:
[10-1232]
---------
T
W
T
D
D
Q
W
N
A
I
V
S
T
G
Q
D
I
L
V
A
A
A
A
G
S
G
K
T
A
V
L
V
E
R
M
I
R
K
I
------
T
A
E
E
N
P
I
D
V
D
R
L
L
V
V
T
F
T
N
A
S
A
A
E
M
K
H
R
I
A
E
A
L
E
K
E
L
V
Q
R
P
G
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
Q
V
L
K
K
Y
Y
Y
L
I
D
L
D
P
G
F
R
I
A
D
Q
T
E
G
E
L
I
G
D
E
V
L
D
E
L
F
E
D
E
Y
A
K
G
E
K
A
F
F
E
L
V
D
R
Y
T
T
D
R
H
D
L
D
L
Q
F
L
V
K
Q
V
Y
E
Y
S
R
S
H
P
N
P
E
A
W
L
E
S
F
V
H
L
Y
D
V
S
E
K
S
A
I
E
E
L
P
F
Y
Q
Y
V
K
E
D
I
A
M
V
L
N
G
A
K
E
K
L
L
R
A
L
E
L
T
----------
D
N
F
L
D
D
L
A
Q
I
D
E
L
I
Q
H
Q
D
D
F
S
E
L
Y
K
R
V
P
A
V
S
------------
D
P
A
L
L
D
E
A
T
D
L
R
N
G
-------------------------
A
K
K
L
L
----
E
K
L
K
----
T
D
Y
F
T
R
S
-------
P
E
Q
H
L
K
S
L
A
E
M
K
P
V
I
E
T
L
V
Q
L
V
I
S
Y
G
K
R
F
E
A
A
K
Q
E
K
S
I
I
D
F
S
D
L
E
H
Y
C
L
A
I
L
T
A
E
N
D
---
R
E
P
S
E
A
A
R
F
Y
Q
E
Q
F
H
E
V
L
V
D
E
Y
Q
D
T
N
L
V
Q
E
S
I
L
Q
L
V
T
S
G
P
E
E
T
G
N
L
F
M
V
G
D
V
K
Q
S
I
Y
R
F
R
L
A
E
P
L
L
F
L
S
K
Y
K
R
F
T
E
S
G
E
G
T
G
R
K
I
D
L
N
K
N
F
R
S
R
A
D
I
L
D
S
T
N
F
L
F
K
Q
----
L
M
G
G
K
I
G
-
E
V
D
Y
D
E
Q
A
E
L
K
-
L
G
A
----
A
Y
P
D
N
D
E
T
E
T
E
L
L
L
I
D
-------------
L
E
T
V
Q
F
E
A
K
A
I
A
K
E
I
R
K
L
I
S
S
P
F
K
----
V
Y
-----
K
K
T
H
R
N
I
Q
Y
R
D
I
V
I
L
L
R
S
M
P
W
A
P
Q
I
M
E
E
L
R
A
Q
G
I
P
-
V
Y
-
A
N
-
L
T
S
G
Y
F
E
A
V
E
V
A
V
A
L
S
V
L
K
V
I
D
N
P
Y
Q
D
I
P
L
A
S
V
L
R
S
P
I
V
G
A
D
E
N
E
L
-
S
L
I
R
L
E
-
N
K
K
--
A
--
P
Y
Y
E
A
M
K
D
Y
L
A
A
G
D
R
S
--
D
E
L
Y
Q
K
L
N
T
F
Y
G
H
L
Q
K
W
R
A
F
S
K
N
H
S
V
S
E
L
I
W
E
V
Y
R
D
T
K
Y
M
D
Y
V
G
G
--
M
----
P
G
--
G
K
Q
R
Q
A
N
L
----
R
V
L
Y
D
R
A
R
Q
Y
---
E
S
----
T
---
A
F
-
R
G
L
F
R
F
L
R
F
I
E
R
M
Q
E
R
G
--
D
------------
Q
E
D
--
V
V
R
L
M
T
I
H
S
S
K
G
L
E
F
P
V
V
F
V
A
G
L
-----
G
R
N
F
N
M
M
D
L
N
K
-
S
Y
L
L
D
K
E
L
G
F
G
T
K
Y
I
H
P
Q
L
R
I
S
Y
-
P
T
L
P
L
I
A
M
K
K
K
M
---
R
R
E
L
L
S
E
E
L
R
V
L
Y
V
A
L
T
R
A
K
E
K
L
F
L
I
G
S
C
K
D
H
Q
K
Q
L
A
K
W
Q
A
S
A
S
Q
T
D
W
L
L
P
E
F
D
R
Y
Q
A
R
T
Y
L
D
F
I
G
P
A
L
A
R
H
R
----------
H
A
D
I
S
G
H
P
A
R
F
A
V
Q
M
I
H
S
Y
D
-------------
S
E
R
L
E
-
A
I
R
R
G
E
P
V
---
F
A
F
D
E
K
A
R
E
Q
L
S
W
T
Y
P
H
Q
E
V
T
Q
I
R
T
K
Q
S
V
S
---------
D
E
Y
S
G
R
-----------
Y
R
-------------
R
---
P
A
F
M
M
K
K
G
L
T
A
A
E
K
G
T
A
M
H
T
V
M
Q
H
I
P
L
S
H
V
P
S
I
E
E
A
E
Q
T
V
H
R
L
Y
E
K
E
L
L
T
E
E
Q
K
D
A
I
D
I
E
E
I
V
Q
F
F
H
T
E
I
G
G
Q
---
L
I
--
G
A
K
W
K
D
R
E
I
P
F
S
L
A
L
P
A
K
E
I
Y
P
D
-----------------
A
H
E
A
D
E
P
L
-----------------
L
V
Q
G
I
I
D
C
L
Y
E
T
E
D
G
L
Y
L
L
A
Y
K
S
D
R
I
E
G
-------
G
F
E
-
G
A
A
P
I
L
K
K
R
Y
E
T
Q
I
Q
L
Y
T
K
A
V
E
Q
I
A
K
T
K
V
K
--------
G
C
A
L
Y
F
F
------------------
D
G
G
H
I
L
T
L
------
1
PsiBlast_PDB
67.41
99%
-107
- C1 -
3U44
-
ADDA_BACSU
A:
[10-1232]
---------
T
W
T
D
D
Q
W
N
A
I
V
S
T
G
Q
D
I
L
V
A
A
A
A
G
S
G
K
T
A
V
L
V
E
R
M
I
R
K
I
------
T
A
E
E
N
P
I
D
V
D
R
L
L
V
V
T
F
T
N
A
S
A
A
E
M
K
H
R
I
A
E
A
L
E
K
E
L
V
Q
R
P
G
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
Q
V
L
K
K
Y
Y
Y
L
I
D
L
D
P
G
F
R
I
A
D
Q
T
E
G
E
L
I
G
D
E
V
L
D
E
L
F
E
D
E
Y
A
K
G
E
K
A
F
F
E
L
V
D
R
Y
T
T
D
R
H
D
L
D
L
Q
F
L
V
K
Q
V
Y
E
Y
S
R
S
H
P
N
P
E
A
W
L
E
S
F
V
H
L
Y
D
V
S
E
K
S
A
I
E
E
L
P
F
Y
Q
Y
V
K
E
D
I
A
M
V
L
N
G
A
K
E
K
L
L
R
A
L
E
L
T
----------
D
N
F
L
D
D
L
A
Q
I
D
E
L
I
Q
H
Q
D
D
F
S
E
L
Y
K
R
V
P
A
V
S
------------
D
P
A
L
L
D
E
A
T
D
L
R
N
G
-------------------------
A
K
K
L
L
----
E
K
L
K
----
T
D
Y
F
T
R
S
-------
P
E
Q
H
L
K
S
L
A
E
M
K
P
V
I
E
T
L
V
Q
L
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Y
G
K
R
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A
A
K
Q
E
K
S
I
I
D
F
S
D
L
E
H
Y
C
L
A
I
L
T
A
E
N
D
---
R
E
P
S
E
A
A
R
F
Y
Q
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Q
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H
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V
L
V
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L
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L
N
K
N
F
R
S
R
A
D
I
L
D
S
T
N
F
L
F
K
Q
----
L
M
G
G
K
I
G
-
E
V
D
Y
D
E
Q
A
E
L
K
-
L
G
A
----
A
Y
P
D
N
D
E
T
E
T
E
L
L
L
I
D
-------------
L
E
T
V
Q
F
E
A
K
A
I
A
K
E
I
R
K
L
I
S
S
P
F
K
----
V
Y
-----
K
K
T
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N
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Q
Y
R
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V
I
L
L
R
S
M
P
W
A
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-
V
Y
-
A
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-
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A
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V
A
V
A
L
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L
K
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Y
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L
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A
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-
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L
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L
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-
N
K
K
--
A
--
P
Y
Y
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L
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Y
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D
Y
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--
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----
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--
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L
----
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V
L
Y
D
R
A
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---
E
S
----
T
---
A
F
-
R
G
L
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L
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M
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G
--
D
------------
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D
--
V
V
R
L
M
T
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H
S
S
K
G
L
E
F
P
V
V
F
V
A
G
L
-----
G
R
N
F
N
M
M
D
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-
S
Y
L
L
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L
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-
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L
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A
M
K
K
K
M
---
R
R
E
L
L
S
E
E
L
R
V
L
Y
V
A
L
T
R
A
K
E
K
L
F
L
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D
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Q
K
Q
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A
K
W
Q
A
S
A
S
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L
L
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E
F
D
R
Y
Q
A
R
T
Y
L
D
F
I
G
P
A
L
A
R
H
R
----------
H
A
D
I
S
G
H
P
A
R
F
A
V
Q
M
I
H
S
Y
D
-------------
S
E
R
L
E
-
A
I
R
R
G
E
P
V
---
F
A
F
D
E
K
A
R
E
Q
L
S
W
T
Y
P
H
Q
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V
T
Q
I
R
T
K
Q
S
V
S
---------
D
E
Y
S
G
R
-----------
Y
R
-------------
R
---
P
A
F
M
M
K
K
G
L
T
A
A
E
K
G
T
A
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H
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V
M
Q
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L
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H
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L
L
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K
D
A
I
D
I
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E
I
V
Q
F
F
H
T
E
I
G
G
Q
---
L
I
--
G
A
K
W
K
D
R
E
I
P
F
S
L
A
L
P
A
K
E
I
Y
P
D
-----------------
A
H
E
A
D
E
P
L
-----------------
L
V
Q
G
I
I
D
C
L
Y
E
T
E
D
G
L
Y
L
L
A
Y
K
S
D
R
I
E
G
-------
G
F
E
-
G
A
A
P
I
L
K
K
R
Y
E
T
Q
I
Q
L
Y
T
K
A
V
E
Q
I
A
K
T
K
V
K
--------
G
C
A
L
Y
F
F
------------------
D
G
G
H
I
L
T
L
------
28
HHSearch
64.72
93%
-104
- C1 -
3U4Q
-
ADDA_BACSU
A:
[10-1231]
---------
T
W
T
D
D
Q
W
N
A
I
V
S
T
G
Q
D
I
L
V
A
A
A
A
G
S
G
K
T
A
V
L
V
E
R
M
I
R
K
I
------
T
A
E
E
N
P
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V
D
R
L
L
V
V
T
F
T
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A
S
A
A
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K
H
R
I
A
E
A
L
E
K
E
L
V
Q
R
P
G
S
---------------------
L
H
I
R
R
Q
L
S
L
L
N
R
A
S
I
S
T
L
H
S
F
C
L
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L
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K
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L
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E
Y
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R
S
H
P
N
P
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A
W
L
E
S
F
V
H
L
Y
D
---------------------
V
S
E
K
S
A
-------
I
E
E
L
----
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---
F
Y
Q
Y
V
K
E
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--
I
-------
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M
V
L
N
G
A
K
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L
----
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A
L
-
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L
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------------
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N
F
L
D
D
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D
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L
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D
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---
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L
N
K
N
F
R
S
R
A
D
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L
D
S
T
N
F
L
F
K
Q
----
L
M
G
G
K
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G
-
E
V
D
Y
D
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Q
A
E
L
K
-
L
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A
----
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Y
P
D
N
D
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T
E
T
E
L
L
L
I
D
-------------
L
E
T
V
Q
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A
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A
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A
K
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K
L
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----
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-----
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K
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D
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A
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L
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----
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---
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S
----
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---
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L
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L
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T
L
P
L
I
A
M
K
K
K
M
---
R
R
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L
L
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E
E
L
R
V
L
Y
V
A
L
T
R
A
K
E
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K
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F
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A
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L
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P
A
L
A
R
H
R
----------
H
A
D
I
S
G
H
P
A
R
F
A
V
Q
M
I
H
S
Y
D
--------------
S
E
R
L
E
A
I
R
R
G
E
P
V
---
F
A
F
D
E
K
A
R
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Q
L
S
W
T
Y
P
H
Q
E
V
T
Q
I
R
T
K
Q
S
V
S
---------
D
E
Y
---------
S
G
R
------------------YRR
P
A
F
M
M
K
K
G
L
T
A
A
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K
G
T
A
M
H
T
V
M
Q
H
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A
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H
R
L
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E
L
L
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D
A
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D
I
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E
I
V
Q
F
F
H
T
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G
Q
---
L
I
--
G
A
K
W
K
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F
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L
A
L
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A
K
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P
D
-----------------
A
H
E
A
D
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P
L
-----------------
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C
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Y
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T
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Y
L
L
A
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D
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-------
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K
T
K
V
K
--------
G
C
A
L
Y
F
F
------------------
D
G
G
H
I
L
T
-------
30
HHSearch
43.78
25%
-82
- C1 -
4C2T
4
?
A:
[5-630]
--
A
G
P
D
L
L
Q
A
L
N
P
T
Q
A
Q
A
A
D
H
F
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V
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A
G
A
G
S
G
K
T
R
T
L
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Y
R
I
A
H
L
I
------
G
H
Y
--
G
V
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P
G
E
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L
A
V
T
F
T
N
K
A
A
A
E
M
R
E
R
A
G
H
L
V
P
G
--------------------------------------
A
G
D
L
W
M
S
T
F
H
S
A
G
V
R
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L
R
T
Y
G
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D
D
D
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I
P
G
I
-
G
-----------------------------------
A
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T
---
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P
R
-----------------
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--------
I
R
G
I
I
D
R
A
----
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---
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-----
N
L
W
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-------------------
P
D
D
L
D
R
S
--------------
R
-
E
---
P
------------------------------------------
F
-----
I
----------------------------------
S
G
L
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R
D
A
A
A
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A
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R
Y
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G
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L
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L
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--------
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---
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D
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A
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A
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L
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----
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T
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L
D
K
---------
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L
K
-
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K
----
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----
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G
Q
P
V
T
F
H
R
A
---------------
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A
D
W
L
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R
L
H
G
-------------------
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Q
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--
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L
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---
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----
D
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V
G
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G
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L
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D
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A
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L
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----
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-
M
-
R
T
K
A
------
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--
A
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L
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T
L
H
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A
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G
L
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V
F
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V
G
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-----
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Q
G
L
L
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S
K
G
A
---
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-------------
A
-------------------
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---
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E
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R
R
L
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A
A
Q
N
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
43.27
25%
-80
- C1 -
4C2U
8
?
A:
[6-630]
---
G
P
D
L
L
Q
A
L
N
P
T
Q
A
Q
A
A
D
H
F
T
G
P
A
L
V
I
A
G
A
G
S
G
K
T
R
T
L
I
Y
R
I
A
H
L
I
------
G
H
Y
--
G
V
H
P
G
E
I
L
A
V
T
F
T
N
K
A
A
A
E
M
R
E
R
A
G
H
L
V
P
G
--------------------------------------
A
G
D
L
W
M
S
T
F
H
S
A
G
V
R
I
L
R
T
Y
G
E
H
I
G
L
R
R
G
F
V
I
Y
D
D
D
D
Q
L
D
I
I
K
E
V
M
G
S
I
P
G
-----------------------
E
T
Q
P
R
V
---------------------------------------------
I
R
G
I
I
D
R
A
----
K
---
S
-----
N
L
W
T
-------------------
P
D
D
L
D
R
---------------
S
R
E
---
P
-----
F
------------------------------------
I
----------------------------------
S
------
G
L
P
R
D
A
A
A
E
A
Y
R
R
Y
E
V
R
K
K
G
Q
N
A
I
D
F
G
D
L
I
T
E
T
V
R
L
F
K
E
V
P
--------
G
V
L
D
K
V
Q
N
K
A
K
F
I
H
V
D
E
Y
Q
D
T
N
R
A
Q
Y
E
L
T
R
L
L
A
S
R
---
D
R
N
L
L
V
V
G
D
P
D
Q
S
I
Y
K
F
R
G
A
D
I
Q
N
I
L
D
F
Q
K
D
Y
P
-----
D
A
K
V
Y
M
L
E
H
N
Y
R
S
S
A
R
V
L
E
A
A
N
K
L
I
E
N
----
N
T
E
R
L
D
K
---------
T
L
K
-
P
V
K
--------
E
A
G
Q
P
V
T
F
H
R
A
---------------
T
D
H
R
A
E
G
D
Y
V
A
D
W
L
T
R
L
H
G
E
-------------------
G
R
A
W
S
E
M
A
I
L
Y
R
T
N
A
Q
S
R
V
I
E
E
S
L
R
R
V
Q
I
P
-
A
R
-
I
V
-
G
G
V
G
F
Y
D
R
R
E
I
R
D
I
L
A
Y
A
R
L
A
L
N
P
A
D
D
V
A
L
R
R
I
I
G
R
P
R
R
G
I
G
D
T
A
L
-
Q
K
L
M
E
W
-
A
R
T
H
H
T
--
S
V
L
T
A
C
A
N
A
A
E
-
Q
N
I
L
--
D
R
G
A
H
K
A
T
E
F
A
G
L
M
E
A
M
S
E
A
A
D
N
Y
E
P
A
A
F
L
R
F
V
M
E
T
S
G
Y
L
D
L
L
R
Q
--
E
G---
Q
E
--
G
Q
V
R
L
E
N
L
----
E
E
L
V
S
A
A
E
E
W
---
S
Q
----
D
EAN
V
G
-
G
S
I
A
D
F
L
D
D
A
A
L
L
S
S
V
D
--
D
-
M
-
R
T
K
A
E
N
K
G
A
P
E
D
--
A
V
T
L
M
T
L
H
N
A
K
G
L
E
F
P
V
V
F
I
V
G
V
-----
E
Q
G
L
L
P
S
K
G
A
---
I
-------------
A
-------------------
E
---
G
P
S
G
I
E
E
E
R
R
L
F
Y
V
G
I
T
R
A
M
E
R
L
L
M
T
A
A
Q
N
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
HHSearch
42.26
25%
-96
- C1 -
1PJR
-
PCRA_GEOSE
A:
[6-623]
----
E
Q
L
L
A
H
L
N
K
E
Q
Q
E
A
V
R
T
T
E
G
P
L
L
I
M
A
G
A
G
S
G
K
T
R
V
L
T
H
R
I
A
Y
L
M
------
A
E
K
--
H
V
A
P
W
N
I
L
A
I
T
F
T
N
K
A
A
R
E
M
R
E
R
V
Q
S
L
L
G
G
A
-------------------------------------
A
E
D
V
W
I
S
T
F
H
S
M
C
V
R
I
L
R
R
D
I
D
R
I
G
I
N
R
N
F
S
I
L
D
P
T
D
Q
L
S
V
M
K
T
I
L
K
E
K
N
I
D
--------
P
----
K
K
F
------------------------
E
P
R
---------------------
T
--------
I
L
G
T
I
S
A
A
----
K
---
N
-----
E
L
----------------------
L
P
P
E
Q
F
A
------------
K
R
-------------------------------------------------------------------------------------------
Y
Y
E
K
V
V
S
D
V
Y
Q
E
Y
Q
Q
R
L
L
R
N
H
S
L
D
F
D
D
L
I
M
T
T
I
Q
L
F
D
R
V
P
--------
D
V
L
H
Y
Y
Q
Y
K
F
Q
Y
I
H
I
D
E
Y
Q
D
T
N
R
A
Q
Y
T
L
V
K
K
L
A
E
R
---
F
Q
N
I
C
A
V
G
D
A
D
Q
S
I
Y
R
W
R
G
A
D
I
Q
N
I
L
S
F
E
R
D
Y
P
-----
N
A
K
V
I
L
L
E
Q
N
Y
R
S
T
K
R
I
L
Q
A
A
N
E
V
I
E
H
----
N
V
N
R
K
P
K
---------
R
I
W
-
T
E
N
--------
P
E
G
K
P
I
L
Y
Y
E
A
---------------
M
N
E
A
D
E
A
Q
F
V
A
G
R
I
R
E
A
V
E
R
------------------
G
E
R
R
Y
R
D
F
A
V
L
Y
R
T
N
A
Q
S
R
V
M
E
E
M
L
L
K
A
N
I
P
-
Y
Q
-
I
V
-
G
G
L
K
F
Y
D
R
K
E
I
K
D
I
L
A
Y
L
R
V
I
A
N
P
D
D
D
L
S
L
L
R
I
I
N
V
P
K
R
G
I
G
A
S
T
I
-
D
---------------
L
F
E
A
L
G
E
L
E
M
-
I
G
L
G
--
A
K
A
A
G
A
L
A
A
F
R
S
Q
L
E
Q
W
T
Q
L
Q
E
Y
V
S
V
T
E
L
V
E
E
V
L
D
K
S
G
Y
R
E
M
L
K
A
--
E
RT--
I
E
--
A
Q
S
R
L
E
N
L
----
D
E
F
L
S
V
T
K
H
F
---
E
N
----
V
S--
D
D
-
K
S
L
I
A
F
L
T
D
L
A
L
I
S
-------------------
G
D
--
A
V
M
L
M
T
L
H
A
A
K
G
L
E
F
P
V
V
F
L
I
G
M
-----
E
E
G
I
F
P
H
N
R
S
L
------------------------------------
E
---
D
D
D
E
M
E
E
E
R
R
L
A
Y
V
G
I
T
R
A
E
E
E
L
V
L
T
S
A
Q
M
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
40.55
24%
-96
- C1 -
1UAA
1
REP_ECOLI
A:
[2-615]
---------
R
L
N
P
G
Q
Q
Q
A
V
E
F
V
T
G
P
C
L
V
L
A
G
A
G
S
G
K
T
R
V
I
T
N
K
I
A
H
L
I
------
R
G
C
--
G
Y
Q
A
R
H
I
A
A
V
T
F
T
N
K
A
A
R
E
M
K
E
R
V
G
Q
T
L
G
R
K
E
------------------------------------
A
R
G
L
M
I
S
T
F
H
T
L
G
L
D
I
I
K
R
E
Y
A
A
L
G
M
K
A
N
F
S
L
F
D
D
T
D
Q
L
A
L
L
K
E
L
T
E
G
L
I
E
D
-----------------------------------------
D
K
V
L
L
---------------------
Q
----
Q
L
I
S
T
I
S
N
W
----
K
---
N
-----
D
L
----------------------
K
T
P
S
Q
A
----------------
A
---
A
--------
S
---
A
-----------------------------
I
-----------------------------------------
G
E
R
D
R
I
F
A
H
C
Y
G
L
Y
D
A
H
L
K
A
C
N
V
L
D
F
D
D
L
I
L
L
P
T
L
L
L
Q
A
N
E
--------
E
V
R
K
R
W
Q
N
K
I
R
Y
L
L
V
D
E
Y
Q
D
T
N
T
S
Q
Y
E
L
V
K
L
L
V
G
S
---
R
A
R
F
T
V
V
G
D
D
D
Q
S
I
Y
S
W
R
G
A
R
P
Q
N
L
V
L
L
S
Q
D
F
P
-----
A
L
K
V
I
K
L
E
Q
N
Y
R
S
S
G
R
I
L
K
A
A
N
I
L
I
A
N
----
N
P
H
V
F
E
K
---------
R
L
F
-
S
E
L
--------
G
Y
G
A
E
L
K
V
L
S
A
---------------
N
N
E
E
H
E
A
E
R
V
T
G
E
L
I
A
H
H
F
V
------------------
N
K
T
Q
Y
K
D
Y
A
I
L
Y
R
G
N
H
Q
S
R
V
F
E
K
F
L
M
Q
N
R
I
P
-
Y
K
-
I
S
-
G
G
T
S
F
F
S
R
P
E
I
K
D
L
L
A
Y
L
R
V
L
T
N
P
D
D
D
S
A
F
L
R
I
V
N
T
P
K
R
E
I
G
P
A
T
L
-
K
K
L
G
E
W
-
A
M
T
--
R
NK
S
M
F
T
A
S
F
D
M
G
L
S
Q
T
L
S
--
G
R
G
Y
E
A
L
T
R
F
T
H
W
L
A
E
I
Q
R
L
A
-
E
R
E
P
I
A
A
V
R
D
L
I
H
G
M
D
Y
E
S
W
L
Y
E
--
T
SPS
P
K
A
--
A
E
M
R
M
K
N
V
----
N
Q
L
F
S
W
M
T
E
M
---
L
E
GSEL
D
---
E
P
-
M
T
L
T
Q
V
V
T
R
F
T
L
R
D
M
M
E
---------
R
---
E
E
E
L
D
--
Q
V
Q
L
M
T
L
H
A
S
K
G
L
E
F
P
Y
V
Y
M
V
G
M
-----
E
E
G
F
L
P
H
Q
S
S
-------------------------------------
I
---
D
E
D
N
I
D
E
E
R
R
L
A
Y
V
G
I
T
R
A
Q
K
E
L
T
F
T
L
C
K
E
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
36.36
19%
-92
- C1 -
1W36
1
RECB_ECOLI
B:
[330-1123]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
A
L
A
E
I
R
E
T
V
A
R
E
K
R
R
R
G
E
L
G
F
D
D
M
L
S
R
L
D
S
A
L
R
S
E
S
------
G
E
V
L
A
A
A
I
R
T
R
F
P
V
A
M
I
D
E
F
Q
D
T
D
P
Q
Q
Y
R
I
F
R
R
I
W
H
H
Q
-
P
E
T
A
L
L
L
I
G
D
P
K
Q
A
I
Y
A
F
R
G
A
D
I
F
T
Y
M
K
A
R
S
E
V
-------
H
A
H
Y
T
L
D
T
N
W
R
S
A
P
G
M
V
N
S
V
N
K
L
F
S
Q
----
T
D
D
A
F
M
F
R
E
I
P
F
I
P
V
K
S
A
G
-
K
N
Q
ALRF
V
F
K
G
E
T
Q
P
A
M
K
M
W
L
M
E
G
E
S
C
-------
G
V
G
D
Y
Q
S
T
M
A
Q
V
C
A
A
Q
I
R
D
W
L
Q
A
G
Q
R
----
G
E
AL
L
M
N
G
D
D
A
R
P
V
R
A
S
D
I
S
V
L
V
R
S
R
Q
E
A
A
Q
V
R
D
A
L
T
L
L
E
I
P
-
S
V
-
Y
L
S
N
R
D
S
V
F
E
T
L
E
A
Q
E
M
L
W
L
L
Q
A
V
M
T
P
E
R
E
N
T
L
R
S
A
L
A
T
S
M
M
G
L
N
A
L
D
I
-
E
T
L
N
N
D
-
E
-------
H
A
W
D
V
V
----------------------
V
E
E
F
D
G
Y
R
Q
I
W
R
K
R
G
V
M
P
M
L
R
A
L
M
S
A
R
N
I
A
E
N
L
L
A
--
T
----
A
G
--
G
E
R
R
L
T
D
I
----
L
H
I
S
E
L
L
Q
E
A
---
G
T
----
Q
----
L
-
E
S
E
H
A
L
V
R
W
L
S
Q
H
I
L
E
P
--
D
S
N
A
S
S
Q
Q
M
R
L
E
S
D
K
H
--
L
V
Q
I
V
T
I
H
K
S
K
G
L
E
Y
P
L
V
W
L
P
F
I
TNFRV
Q
E
Q
A
F
Y
H
D
R
H
S
F
E
A
V
L
D
L
---------
N
A
----------
A
-
P
E
S
V
D
L
A
---
E
A
E
R
L
A
E
D
L
R
L
L
Y
V
A
L
T
R
S
V
W
H
C
S
L
G
V
A
P
L
V
R
R
R
--
G
D
K
K
G
D
-----
T
------
D
V
H
Q
-
S
A
L
G
R
L
L
Q
K
G
E
P
-
Q
D
A
A
G
L
R
-
T
C
I
E
A
--
L
C
D
-
D
D
---
I
A
W
Q
T
A
-------------
Q
-
T
G
--------
D
N
-
Q
--
P
-
W
Q
V
N
D
V
S
T
A
E
L
-
N
A
K
T
L
Q
R
L
P
G
D
N
W
R
V
T
S
Y
S
G
L
Q
Q
R
G
H
G
I
---------
A
Q
D
L
M
P
R
LDVDAAGVASVVE
E
---
P
T
L
T
P
H
Q
F
P
R
G
A
S
P
G
T
F
L
H
S
L
F
E
D
L
D
F
T
Q
P
V
D
P
N
W
V
R
E
K
L
E
L
G
---
G
-
F
-
E
S
Q
W
E
P
V
L
T
E
W
I
T
A
V
L
Q
A
P
L
N
E
T
GVS
L
S
QL
S
A
R
N
K
Q
V
E
M
E
F
Y
L
P
I
S
E
P
L
I
A
S
Q
LDTLIRQFDPLSAGCPP
L
E
F
M
Q
V
R
G
-----------------
M
L
K
G
F
I
D
L
V
F
R
H
E
G
R
Y
Y
L
L
D
Y
K
S
N
W
L
G
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A
Y
--
T
Q
Q
A
M
A
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A
H
R
Y
D
L
Q
Y
Q
L
Y
T
L
A
L
H
R
Y
L
R
---------------------------------------------------
11
PsiBlast_PDB
34.06
22%
-79
- C1 -
4C2U
6
?
A:
[182-639]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
R
Y
E
V
R
K
K
G
Q
N
A
I
D
F
G
D
L
I
T
E
T
V
R
L
F
--------
K
E
V
P
G
V
L
D
K
V
Q
N
K
A
K
F
I
H
V
D
E
Y
Q
D
T
N
R
A
Q
Y
E
L
T
R
L
L
A
S
---
R
D
R
N
L
L
V
V
G
D
P
D
Q
S
I
Y
K
F
R
G
A
D
I
Q
N
I
L
D
F
Q
K
D
Y
P
D
A
-----
K
V
Y
M
L
E
H
N
Y
R
S
S
A
R
V
L
E
A
A
N
K
L
I
---------------------------------------
E
N
N
T
E
R
L
------
D
K
T
L
K
P
V
K
E
A
G
Q
P
V
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F
H
R
A
T
D
H
R
A
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G
D
Y
V
A
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W
L
T
----
R
L
--
H
G
E
G
R
A
-----
W
S
E
M
A
I
L
Y
R
T
N
A
Q
S
R
V
I
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E
S
L
R
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-
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K
L
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M
E
-
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--
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L
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L
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---
Q
----
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Q
V
R
L
E
N
L
----
E
E
L
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S
A
A
E
E
W
S
Q
D
E
A
----
N
---
V
G
-
G
S
I
A
D
F
L
D
D
A
A
L
L
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--
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-
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A
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I
V
G
V
-----
E
Q
G
L
------------------------------
L
-
P
S
K
G
A
I
A
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G
P
S
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-------
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R
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L
L
M
--
T
A
A
Q
N
R
M
Q
F
G
K
T
N
A
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
33.64
16%
-82
- C1 -
1W36
1
RECB_ECOLI
B:
[1-1174]
---
M
S
D
V
A
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L
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----
L
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TTDNPLYERLLEEIDDKAQAA
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--------------------------
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-------------------------
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------------------------------
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----
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----
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-------------
R
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---
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R
R
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K
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D
T
D
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------------------------------------
A
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L
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A
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---------------------
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---
P
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L
Q
A
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L
N
E
T
G
V
S
L
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---
Q
L
--
S
A
R
N
K
Q
V
E
M
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F
Y
L
P
I
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P
L
I
A
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-----------------
L
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DPLSAGCPPLEFMQVRG
M
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V
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LRGVDKEHPQQGIYTTRP
N
A
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L
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A
L
M
DEMFAG
12
PsiBlast_PDB
33.19
22%
-87
- C1 -
4C30
4
?
A:
[182-639]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
R
Y
E
V
R
K
K
G
Q
N
A
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D
F
G
D
L
I
T
E
T
V
R
L
F
--------
K
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G
V
L
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K
A
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Y
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L
T
R
L
L
A
S
---
R
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N
L
L
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F
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A
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Q
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I
L
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F
Q
K
D
Y
P
D
A
-----
K
V
Y
M
L
E
H
N
Y
R
S
S
A
R
V
L
E
A
A
N
K
L
I
---------------------------------------
E
N
N
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L
------
D
K
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K
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----
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--
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G
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-----
W
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A
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T
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V
L
T
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C
A
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----------
A
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K
A
T
E
F
A
G
L
M
E
A
M
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E
A
A
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N
Y
E
P
A
A
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L
R
F
V
M
E
T
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G
Y
L
D
L
L
R
---
Q
----
E
G
QE
G
Q
V
R
L
E
N
L
----
E
E
L
V
S
A
A
E
E
W
S
Q
D
E
A
-------------
I
A
D
F
L
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A
A
L
L
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S
V
D
--
D
-
M
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R
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K
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D
--
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V
F
I
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-----
E
Q
G
L
------------------------------
L
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I
A
E
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-------
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L
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--
T
A
A
Q
N
R
M
Q
F
G
K
T
N
A
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
32.59
22%
-85
- C1 -
4C2T
4
?
A:
[182-639]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
R
Y
E
V
R
K
K
G
Q
N
A
I
D
F
G
D
L
I
T
E
T
V
R
L
F
--------
K
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P
G
V
L
D
K
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Q
N
K
A
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H
V
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N
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Y
E
L
T
R
L
L
A
S
---
R
D
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L
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L
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Q
K
D
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A
-----
K
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Y
M
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H
N
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R
S
S
A
R
V
L
E
A
A
N
K
L
I
---------------------------------------
E
N
N
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K
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P
V
K
E
A
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Q
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A
T
D
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----
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--
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-----
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A
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L
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---
Q
----
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Q
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R
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L
----
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---
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----
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A
------
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D
--
A
V
T
L
M
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L
H
N
A
K
G
L
E
F
P
V
V
F
I
V
G
V
-----
E
Q
G
L
------------------------------
L
-
P
S
K
G
A
I
A
E
G
P
S
G
-------
I
E
E
E
R
R
L
F
Y
V
G
I
T
R
A
M
E
R
L
L
M
--
T
A
A
Q
N
R
M
Q
F
G
K
T
N
A
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
31.94
22%
-112
- C1 -
3K70
-
RECB_ECOLI
B:
[377-809]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
V
A
M
I
D
E
F
Q
D
T
D
P
Q
Q
Y
R
I
F
R
R
I
W
H
H
Q
P
E
T
A
-
L
L
L
I
G
D
P
K
Q
A
I
Y
A
F
R
G
A
D
I
F
T
Y
M
K
A
R
S
E
V
H
A
-------
H
Y
T
L
D
T
N
W
R
S
A
P
G
M
V
N
S
V
N
K
L
F
S
Q
TDDA
F
M
F
R
E
I
P
-
F
I
P
V
K
S
A
G
K
N
Q
A
L
R
F
----
V
F
K
G
E
T
Q
P
A
M
K
M
W
L
M
E
-
G
E
S
C
G
V
G
D
Y
Q
S
T
M
------
A
Q
V
C
A
A
Q
I
R
D
W
L
Q
A
G
Q
R
GEAL
L
M
--
N
G
D
D
A
--
R
P
V
R
A
S
D
I
S
V
L
V
R
S
R
Q
E
A
A
Q
V
R
D
A
L
T
L
L
E
I
P
S
V
Y
-
L
S
-
N
R
D
S
V
F
E
T
L
E
A
Q
E
M
L
W
L
L
Q
A
V
M
T
P
E
R
E
N
T
L
R
S
A
L
A
T
S
M
M
G
L
--
N
A
L
-
D
I
E
T
L
N
-
N
D
E
--
H
--
A
W
D
V
V
V
E
E
-------------------
F
D
G
Y
R
Q
I
W
R
----
K
R
G
V
M
P
M
L
R
A
L
M
S
A
R
N
I
A
E
N
L
L
A
--
T
----
A
G
--
G
E
R
R
L
T
D
I
LHIS
E
L
L
Q
E
A
G
T
Q
L
---
E
S
----
E
---------
H
A
L
V
R
W
L
S
Q
H
I
L
E
P
--
D
-
S
-
N
A
S
S
Q
Q
M
R
L
E
S
D
KH
L
V
Q
I
V
T
I
H
K
S
K
G
L
E
Y
P
L
V
W
L
P
F
I
-----
T
-
N
F
R
V
Q
E
--
Q
-
A
F
Y
H
D
--------------
R
H
S
F
E
A
V
L
D
L
N
A
A
P
E
S
V
DLA
E
A
E
R
L
A
E
D
L
R
L
L
Y
V
A
L
T
R
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
31.78
66%
-302
- C1 -
2PJR
2
?
G:
[2-25]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
A
V
M
L
M
T
L
H
A
A
K
G
L
E
F
P
V
V
F
L
I
G
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
31.44
22%
-108
- C1 -
1W36
-
RECB_ECOLI
B:
[377-809]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
V
A
M
I
D
E
F
Q
D
T
D
P
Q
Q
Y
R
I
F
R
R
I
W
H
H
Q
P
E
T
A
-
L
L
L
I
G
D
P
K
Q
A
I
Y
A
F
R
G
A
D
I
F
T
Y
M
K
A
R
S
E
V
H
A
-------
H
Y
T
L
D
T
N
W
R
S
A
P
G
M
V
N
S
V
N
K
L
F
S
Q
TDDA
F
M
F
R
E
I
P
-
F
I
P
V
K
S
A
G
K
N
Q
A
L
R
F
----
V
F
K
G
E
T
Q
P
A
M
K
M
W
L
M
E
-
G
E
S
C
G
V
G
D
Y
Q
S
T
M
------
A
Q
V
C
A
A
Q
I
R
D
W
L
Q
A
G
Q
R
GEAL
L
M
--
N
G
D
D
A
--
R
P
V
R
A
S
D
I
S
V
L
V
R
S
R
Q
E
A
A
Q
V
R
D
A
L
T
L
L
E
I
P
S
V
Y
-
L
S
-
N
R
D
S
V
F
E
T
L
E
A
Q
E
M
L
W
L
L
Q
A
V
M
T
P
E
R
E
N
T
L
R
S
A
L
A
T
S
M
M
G
L
--
N
A
L
-
D
I
E
T
L
N
-
N
D
E
--
H
--
A
W
D
V
V
V
E
E
-------------------
F
D
G
Y
R
Q
I
W
R
----
K
R
G
V
M
P
M
L
R
A
L
M
S
A
R
N
I
A
E
N
L
L
A
--
T
----
A
G
--
G
E
R
R
L
T
D
I
LHIS
E
L
L
Q
E
A
G
T
Q
L
---
E
S
----
E
---------
H
A
L
V
R
W
L
S
Q
H
I
L
E
P
--
D
-
S
-
N
A
S
S
Q
Q
M
R
L
E
S
D
KH
L
V
Q
I
V
T
I
H
K
S
K
G
L
E
Y
P
L
V
W
L
P
F
I
-----
T
-
N
F
R
V
Q
E
--
Q
-
A
F
Y
H
D
--------------
R
H
S
F
E
A
V
L
D
L
N
A
A
P
E
S
V
DLA
E
A
E
R
L
A
E
D
L
R
L
L
Y
V
A
L
T
R
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
30.90
25%
-103
- C1 -
3PJR
2
?
A:
[190-580]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
D
F
D
D
L
I
M
T
T
I
Q
L
F
-------
D
R
V
P
-
D
V
L
H
Y
Y
Q
Y
K
F
Q
Y
I
H
I
D
E
Y
Q
D
T
N
R
A
Q
Y
T
---
L
V
K
K
L
A
E
R
F
Q
N
I
C
A
V
G
D
A
D
Q
S
I
Y
R
W
R
G
A
D
I
Q
N
I
L
S
F
E
R
D
Y
P
N
A
-----
K
V
I
L
L
E
Q
N
Y
R
S
T
K
R
I
L
Q
A
A
N
E
V
I
E
H
----
N
V
N
R
K
P
K
-
R
I
------------------
W
T
E
N
P
E
G
K
P
I
L
Y
Y
-------
E
A
M
N
E
A
D
E
-------
A
Q
F
V
A
G
R
I
R
E
A
V
E
R
------------
G
E
R
R
------
Y
R
D
F
A
V
L
Y
R
T
N
A
Q
S
R
V
M
E
E
M
L
L
K
A
N
I
P
-
Y
Q
-
I
V
-
G
G
L
K
F
Y
D
R
K
E
I
K
D
I
L
A
Y
L
R
V
I
A
N
P
D
D
D
L
S
L
L
R
I
I
N
V
P
K
R
G
I
G
A
S
T
I
D
K
L
V
R
Y
A
A
D
H
E
--
L
--
S
L
F
E
A
L
G
E
-
L
E
M
I
G
L
G
--
A
K
A
A
G
A
L
A
A
F
R
S
Q
L
E
Q
W
T
Q
L
Q
E
Y
V
S
V
T
E
L
V
E
E
V
L
D
K
S
G
Y
R
E
M
L
K
A
ER
T
----
I
E
--
A
Q
S
R
L
E
N
L
----
D
E
F
L
S
V
T
K
H
F
---
E
N
----
V
---
S
D
D
K
S
L
I
A
F
L
T
D
L
A
L
I
S
D
L
D
--
E
-----
T
E
Q
A
--
A
E
G
D
--
A
V
M
L
M
T
L
H
A
A
K
G
L
E
F
P
V
V
F
L
I
G
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
30.79
66%
-320
- C1 -
2PJR
1
?
B:
[2-25]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
--
A
V
M
L
M
T
L
H
A
A
K
G
L
E
F
P
V
V
F
L
I
G
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
30.17
25%
-97
- C1 -
1QHG
1
PCRA_GEOSE
A:
[190-580]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
D
F
D
D
L
I
M
T
T
I
Q
L
F
-------
D
R
V
P
-
D
V
L
H
Y
Y
Q
Y
K
F
Q
Y
I
H
I
D
E
Y
Q
D
T
N
R
A
Q
Y
T
---
L
V
K
K
L
A
E
R
F
Q
N
I
C
A
V
G
D
A
D
Q
S
I
Y
R
W
R
G
A
D
I
Q
N
I
L
S
F
E
R
D
Y
P
N
A
-----
K
V
I
L
L
E
Q
N
Y
R
S
T
K
R
I
L
Q
A
A
N
E
V
I
E
H
----
N
V
N
R
K
P
K
-
R
I
------------------
W
T
E
N
P
E
G
K
P
I
L
Y
Y
-------
E
A
M
N
E
A
D
E
-------
A
Q
F
V
A
G
R
I
R
E
A
V
E
R
------------
G
E
R
R
------
Y
R
D
F
A
V
L
Y
R
T
N
A
Q
S
R
V
M
E
E
M
L
L
K
A
N
I
P
-
Y
Q
-
I
V
-
G
G
L
K
F
Y
D
R
K
E
I
K
D
I
L
A
Y
L
R
V
I
A
N
P
D
D
D
L
S
L
L
R
I
I
N
V
P
K
R
G
I
G
A
S
T
I
D----------------
L
F
E
A
L
G
E
-
L
E
M
I
G
L
G
--
A
K
A
A
G
A
L
A
A
F
R
S
Q
L
E
Q
W
T
Q
L
Q
E
Y
V
S
V
T
E
L
V
E
E
V
L
D
K
S
G
Y
R
E
M
L
K
A
E
R
T
----
I
E
--
A
Q
S
R
L
E
N
L
----
D
E
F
L
S
V
T
K
H
F
---
E
N
----
V
---
S
D
D
K
S
L
I
A
F
L
T
D
L
A
L
I
S
-------------------
G
D
--
A
V
M
L
M
T
L
H
A
A
K
G
L
E
F
P
V
V
F
L
I
G
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------