@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu27500: (2016-07-13 )
MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFCTATEDYEDVIRVCNQIGIPYYAVNFEKQYYEKVFQYFLDEYKAGRTPNPDVLCNKEIKFKAFLEHALSLGADYLATGHYARVDRSGGKVRMLRGIDENKDQTYFLNQLTEDTLSKVMFPIGELQKSRVREIAKEAELATATKKDSTGICFIGERNFKTFLSQYLPAQPGDMMTMDGEVKGRHDGLMYYTIGQRHGLGIGGSGEPWFAVGKDLEKNILYVDQGFHNPLLYSDKITATNISWVRSDIMKGEEISCTAKFRYRQEDHKVTVRMTGEGEAEVIFDEQVRAVTPGQAVVFYDGEECLGGGTIDDVYKDGTKLWYV

Atome Classification :

(20 SA) .........10........20........-30........40........50........60........-70.........80.---.......90--..--......100.......110...-...-.-120........130...-.-...140.......150........160........170.--.-------.....180.......190---.......200.......210...-------------.----.--------.-.220...--....230......-.240.......250---.--.----......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MEKRPEDTRVVVGMSGGVDSSVAALLLKE-QGYDVIGIFMKNWDDTDENGFCTATEDYEDVIRVCNQIGI-P-YYAVNFEKQYYE---KVFQYFLDE--YK--AGRTPNPDVLCNKEIKFKAFLE-HAL-S-LG-ADYLATGHYARVDR-S-GGKVRMLRGIDENKD-QTYFLNQLTE-DTLSKVMFPIGE--L-------QKSRVREIAKEAELATAT---KKDSTGICFIGERNFKTFLSQYL-------------P----A--------Q-PGDMMTM--DGEVKGRHDGLMY-YTIGQRHGLGIGG----S--G----EPWFAVGKDLEKNILYVDQGFHNPLLYSDKITATNISWVRSDIMKGEEISCTAKFRYRQEDHKVTVRMTGEGEAEVIFDEQVRAVTPGQAVVFYDGEECLGGGTIDDVYKDGTKLWYV
47 HHSearch 76.2769% -33 - C1 -2HMA MNMA_STRPN A:[7-373] ----NSKTRVVVGMSGGVDSSVTALLLKE-QGYDVIGIFMKNWDDTD----CTATEDYKDVVAVADQIGI-P-YYSVNFEKEYWD---RVFEYFLAE--YR--AGRTPNPDVMCNKEIKFKAFLD-YAI-T-LG-ADYVATGHYARVAR-DEDGTVHMLRGVDNGKD-QTYFLSQLSQ-EQLQKTMFPLGH--L-------EKPEVRRLAEEAGLSTAK---KKDSTGICFIGEKNFKNFLSNYL-------------P----A--------Q-PGRMMTV--DGRDMGEHAGLMY-YTIGQRGGLGIG-G---D--N----APWFVVGKDLSKNILYVGQGFYHDSLMSTSLEASQVHFTREMP-EEFTLECTAKFRYRQPDSKVTVHVK-GEKTEVIFAEPQRAITPGQAVVFYDGEECLGGGLIDNAYRDGQVC---
1 PsiBlast_PDB 68.2066% -11 - C1 -2HMA MNMA_STRPN A:[26-376] -----------------------ALLLKE-QGYDVIGIFMKNWDDTD----CTATEDYKDVVAVADQIGI-P-YYSVNFEKEYWD---RVFEYFLAE--YR--AGRTPNPDVMCNKEIKFKAFLD-YAI-T-LG-ADYVATGHYARVARDE-DGTVHMLRGVDNGKD-QTYFLSQLSQ-EQLQKTMFPLGH--L-------EKPEVRRLAEEAGLSTAK---KKDSTGICFIGEKNFKNFLSNYL-------------P----A--------Q-PGRMMTV--DGRDMGEHAGLMY-YTIGQRGGLGIG------GDN----APWFVVGKDLSKNILYVGQGFYHDSLMSTSLEASQVHFTR-EMPEEFTLECTAKFRYRQPDSKVTVHVKGE-KTEVIFAEPQRAITPGQAVVFYDGEECLGGGLIDNAYRDGQVCQYI
21 PsiBlast_CBE 66.3157% -3 - C1 -2DEU MNMA_ECOLI B:[19-373] --------KVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAA-EDLG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLVTAK---KKDSTGICFIGERKFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGG----T--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE------------
22 PsiBlast_CBE 65.7157% -13 - C1 -2DER MNMA_ECOLI B:[19-373] --------KVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAA-EDLG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLVT---------TGICFIGERKFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGG----T--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE------------
4 PsiBlast_PDB 65.1657% -3 - C1 -2DEU MNMA_ECOLI A:[19-373] --------KVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAA-EDLG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLVTAK---KKDSTGICFIGERKFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGG----T--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE------------
3 PsiBlast_PDB 64.9357% -11 - C1 -2DET MNMA_ECOLI A:[19-373] --------KVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAA-EDLG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLVTAK---KKDSTGICFIGERKFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGG----T--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE------------
37 Fugue 63.8254% 0 - C1 -2DER MNMA_ECOLI A:[17-380] ------AKKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAAED-LG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAED-------------------LGLVKFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGGTKEGT--E----EPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV-----
2 PsiBlast_PDB 63.8257% -3 - C1 -2DER MNMA_ECOLI A:[19-373] --------KVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLE-FAA-EDLG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLV-------------------KFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGG----T--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE------------
46 HHSearch 63.1456% 4 * C1 *2DER MNMA_ECOLI A:[17-378] ------AKKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI-E-LHTVNFAAEYWD---NVFELFLAE--YK--AGRTPNPDILCNKEIKFKAFLEFAAE-D-LG-ADYIATGHYVRRAD-V-DGKSRLLRGLDSNKD-QSYFLYTLSH-EQIAQSLFPVGE--L-------EKPQVRKIAEDLGLV-------------------KFREFLGRYL-------------P----A--------Q-PGKIITV--DGDEIGEHQGLMY-HTLGQRKGLGIGGTKEGT--E----EPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP-FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL-------
12 PsiBlast_PDB 41.5059%-286 - C1 -2NZ2 - ASSY_HUMAN A:[8-36] ---------VVLAYSGGLDTSCILVWLKE-QGYDVIA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66 HHSearch 40.3624% -98 - C1 -2YWB - GUAA_THET8 A:[208-386] -----GKDRVLLAVSGGVDSSTLALLLAK-AGVDHLAVFVDHGLLR--------LGEREEVEGALRALGV-N-LLVVDAKERFLK---ALKG-------V----EDPEEKRKIIGR-EFVAAFSQ-VAR-E-RGPFRFLAQGTLYPDVI-E-----------------------GLPE-DLEFELLEPFRL--L-------FKDEVRELALLLGLPDT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 34.1327%-157 - C1 -3FIU ? A:[33-100] ----------VIGLSGGIDSAVAASLAVK-TGLPTTALILP----SDNNQH----QDMQDALELIEMLNI-E-HYTISIQPAY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60 HHSearch 33.6622% -83 - C1 -2NZ2 ASSY_HUMAN A:[5-174] ------KGSVVLAYSGGLDTSCILVWLKE-QGYDVIAYLANIGQK----------EDFEEARKKALKLGA-KKVFIEDVSREFVE---EFIWPAIQS--SALYEDRYLLGTSLARP-CIARKQVE-IAQ-R-EG-AKYVSHGATGKGND-Q-VRF-EL--S-----------CYSLAP---QIKVIAPWRM--PEFYNRFK-RNDLMEYAKQHGIPIP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 32.4548%-232 - C1 -2YWC - GUAA_THET8 A:[211-271] --------RVLLAVSGGVDSSTLALLLAK-AGVDHLAVFVDH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56 HHSearch 32.1720% -51 - C1 -1VL2 - ASSY_THEMA A:[2-194] ------KEKVVLAYSGGLDTSVILKWLCE-KGFDVIAYVANVGQK----------DDFVAIKEKALKTGASK-VYVEDLRREFVT---DYIFTALLGNAMY--EGRYLLGTAIARP-LIAKRQVE-IAE-K-EG-AQYVAHGATGKGND-Q-VRFE---LT-----------YAALN---PNLKVISPWKD--PEFLAKFK--TDLINYAMEKGIPIKVSKKRPYSEDENLMHI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 HHSearch 32.0816% -93 - C1 -3BL5 QUEC_BACSU A:[3-178] ------KEKAIVVFSGGQDSTTCLLWALK-EFEEVETVTFHYNQRH--------SQEVEVAKSIAEKLGV-K-NHLLDMSLLNQLAPNALT-----------------STFVPGRNLVFLSFASI-LAY-Q-IG-ARHIITGVCE-----G-Y-----PDCRDEFVK-SCNVTVNLAM-EKPFVIHTPLMW--L-------NKAETWKLADELGALDF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 31.1929%-128 - C1 -3VRH ? A:[46-166] -----KDERILVAVSGGKDSAVTAYVLKK-LGYNIECLHI----NLGISGYSEKSEEYAK--KQCKLIGA-P-LHIVRI-----K---EILGYGIGE--VK--TRRPPCSYCGLTKRYIMNKF----AY-D-NG-FDAIATGH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 30.8522%-183 - C1 -3P52 NADE_CAMJE A:[22-106] --KNSQSQGVVLGLSGGIDSALVATLCKR-ALKENVFALLMPTQISNK-------ANLEDALRLCADLNL-E-YKIIEIQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55 HHSearch 30.7922% -52 - C1 -3VRH ? A:[45-261] ----TKDERILVAVSGGKDSAVTAYVLKK-LGYNIECLHINLGISGY------SEKSEEYAKKQCKLIGA-P-LHIVRIKEILGY---G-----IGE--VK----TRRPPCSYCGLT-KRYIMNK-FAY-D-NG-FDAIATGHNLDDEA-S-FLLNNILHWNTEYLAKGGPILP--QQ-GKFIKKVKPLYE--V-------TEREVVAYALAVGLEYIV---EECPY----T-TLDMKGVLNELE-------------E----K--------R-PGTKFNFVRGYL----------------------------------------------------------------------------------------------------------------------------------------------------------
52 HHSearch 30.6818% -24 - C1 -4XFJ ? A:[10-263] ------SERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQG--------G-EDMEVVRQRALDCGAVE-SIVIDARDEFAN---DYCVPAIQSNALY--MDRYPLVSALSRP-LIVKHLVK-AAR-E-HG-GTIVAHGCTGKGND-Q-V-----------------RFEVGFASLAPDLEVLAPVRDYAW-------TREKAIAFAEENNIPINVT--SPFSIDQNVWGRAVETGFLEHLWNAPTKDVYSYTEDPTVNWSTPDEVIVGFEQGVPVSI--DGRSVTPLQAIEELNRRGGEQGVGR------------------------------------------------------------------------------------------------------------------------------------