@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu36280: (2016-07-31 )
MASLKEILIHVEQMEDGSFTLSAFDENEQPLPYSHMKKHLFQWHESSFYGTFLEDVSFIGTTAVLLSPWMTVELLGKNSFNSFSSVQLTEETEPLIEAASTIYEFIADGDFMPDYDAWTNGVFRWKDRDNILEGFTAEWFSAAVQDYIQYDDDLREKWEHIKEKSPAVTTFRGHFLDEEDFLEGIGWIDDQSPFTVGLRLNEPDFDGDEWKIEMFLRDKKSGAVEFFDGLKSLKKSWQAYSDKIAREQDRFHRTVPWLSFDSGTTLISEEEAWIFLSEASETLVDMGVEILLPSWWQIVRDSNMMLKAKVSSSPRGESFVGMNALLDFNWRFATNGIELTEAEFNELVASNRRLVNIRGQWVKIDPQFIKQMKRLMEKAESEGLHMSDILARELMDQQDGGLEDSDLIDTSAFAGIQFDLSKQLRSLIRKLTAAENLPEHKVSPSFKGTLRPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIAYFLHVKESGRQKTPHLIIAPTSVLGNWQRELQTFAPDLSVALHYGPRRPKGDDFAAHYENADVVLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHHIALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRIGQLQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEKLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQRKEYPTLILSLKAGGTGLNLTAANHVIHYDRWWNPAVENQATDRAYRIGQERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQSENWITELSTQELEELFTLSATAQ

Atome Classification :

(20 SA) -.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440-.......450.......460..-----.-----.-----...470.......480.......490.....------..500----.----.-....-.510...-....520.--.---.--....530.......-540.------....----------.--------.550.......560.-----.--.---....570.......580.--.---.--....590...---------....600.......610.......620.-------......-----------630.....----..640...-----------.-----------...650......------------------------------------.660-.....----------...670.......680.......690.......700..-------------------------....---.710.......720.......730--------..-.------------.----------------------.-.------------..-.740-----------------........-----.750.......760--.-....-----..770.......780.......790---.....--...800.......810.-..--.--.-.--.--820-........830.......840.......850......---.860.-.-.....870.......880.......890......-.-900.-......910.......920---------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -MASLKEILIHVEQMEDGSFTLSAFDENEQPLPYSHMKKHLFQWHESSFYGTFLEDVSFIGTTAVLLSPWMTVELLGKNSFNSFSSVQLTEETEPLIEAASTIYEFIADGDFMPDYDAWTNGVFRWKDRDNILEGFTAEWFSAAVQDYIQYDDDLREKWEHIKEKSPAVTTFRGHFLDEEDFLEGIGWIDDQSPFTVGLRLNEPDFDGDEWKIEMFLRDKKSGAVEFFDGLKSLKKSWQAYSDKIAREQDRFHRTVPWLSFDSGTTLISEEEAWIFLSEASETLVDMGVEILLPSWWQIVRDSNMMLKAKVSSSPRGESFVGMNALLDFNWRFATNGIELTEAEFNELVASNRRLVNIRGQWVKIDPQFIKQMKRLMEKAESEGLHMSDILARELMDQQDGGLEDSDLIDTSAFAGIQFDLSKQLRSLIRKLTAAENLPEHKV-SPSFKGTLRPYQKYGMNWLLFL-----R-----E-----SGFGACLADDMGLGKTIQMIAYFLHVKESGR------QKTPH----L----I-IAPT-SVLGNWQ-RELQTFAP--D---L--SVALHYGPRRPKGD-DFAA------HYEN----------A--------DVVLTSYGLSHADTE-----E--L---SSVTWNTICLDEAQNIKN--A---H--TKQSRAIRKL---------KGLHHIALSGTPMENRLTELWSIFDFMN-------KGYLGS-----------LTGFHKRY----VLPIEKDR-----------D-----------EKRIGQLQQLIR------------------------------------PFL--LRRTK----------RDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVKDTFD-------------------------HMTS---LTGMQRKALILSMLGRLKQICD----------HP-A------------L----------------------Y-L------------KE-EQ-------------------TELLAGRS-----VKLEKLLELMTAIR--A-QNES-----CLIFTQYIQMGNMMKRLLEKTFGE----PVQFL--NGSLSKQERDTLVEKFQ-RK--E--Y-P--T--LI--LSLKAGGTGLNLTAANHVIHYDRWWNPAVENQATDRA---YRIGQ-E-RFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQ-S-ENWI-TELSTQELEELFTLSATAQ---------------------------------------------------------------------
30 HHSearch 87.3048% -86 - C2 -1Z63 ? A:[30-495] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E-PYNIKANLRPYQIKGFSWMRFM-----N-----K-----LGFGICLADDMGLGKTLQTIAVFSDAKKEN-------ELTPS----L----V-ICPL-SVLKNWE-EELSKFAP--H---L--RFAVFHEDRSKI-------------KLED----------Y--------DIILTTYAVLLRDT------R--L---KEVEWKYIVIDEAQNIKN--P---Q--TKIFKAVKEL---------KSKYRIALTGTPIENKVDDLWSIMTFLN-------PGLLGS-----------YSEFKSKF----ATPIKKG------------D-----------NMAKEELKAIIS------------------------------------PFI--LRRTK----------YDKAIINDLPDKIETNVYCNLTPEQAAMYKAEVENLFN-------------------------NIDS---VTGIKRKGMILSTLLKLKQIVD----------HP-A------------L----------------------L-K------------GG-EQ----------------------SVRRS-----GKMIRTMEIIEEAL--D-EGDK-----IAIFTQFVDMGKIIRNIIEKELNT----EVPFL--YGELSKKERDDIISKFQ-NNP-S--V-K--F--IV--LSVKAG-FGINLTSANRVIHFDRWWNP---DQATDRV---YRIGQ-T-RNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSG-DSWI-TELSTEELRKVIEL--------------------------------------------------------------------------
2 PsiBlast_PDB 82.9845% -87 - C2 -1Z63 ? A:[33-497] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIKANLRPYQIKGFSWMRFM-----N-----K-----LGFGICLADDMGLGKTLQTIAVFSDAKKEN-------ELTPS----L----V-ICPL-SVLKNWE-EELSKFAP--H---L--RFAVFHEDRS-------KI------KLED----------Y--------DIILTTYAVLLRDTR--------L---KEVEWKYIVIDEAQNIKN--P---Q--TKIFKAVKEL---------KSKYRIALTGTPIENKVDDLWSIMTFLN-------PGLLGS-----------YSEFKSKF----ATPIKKG------------D-----------NMAKEELKAIIS------------------------------------PFI--LRRTK----------YDKAIINDLPDKIETNVYCNLTPEQAAMYKAEVENLFN-------------------------NIDS---VTGIKRKGMILSTLLKLKQIVD----------HP-A------------L----------------------L-K------------GG-EQ-------------------SVRRSGKM-----IRTMEIIE---EAL--D-EGDK-----IAIFTQFVDMGKIIRNIIEKELNT----EVPFL--YGELSKKERDDIISKFQ-NNP-S--V-K--F--IV--LSVKAG-FGINLTSANRVIHFDRWWNP---DQATDRV---YRIGQ-T-RNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIIS-SGDSWI-TELSTEELRKVIELSV------------------------------------------------------------------------
1 PsiBlast_PDB 82.8546% -77 - C2 -1Z6A ? A:[33-497] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIKANLRPYQIKGFSWMRFM-----N-----K-----LGFGICLADDMGLGKTLQTIAVFSDAKKEN-------ELTPS----L----V-ICPL-SVLKNWE-EELSKFAP--H---L--RFAVFHEDRS-------KI------KLED----------Y--------DIILTTYAVLLRDTR--------L---KEVEWKYIVIDEAQNIKN--P---Q--TKIFKAVKEL---------KSKYRIALTGTPIENKVDDLWSIMTFLN-------PGLLGS-----------YSEFKSKF----ATPIKKG------------D-----------NMAKEELKAIIS------------------------------------PFI--LRRTK----------YDKAIINDLPDKIETNVYCNLTPEQAAMYKAEVENLFN-------------------------NIDS---VTGIKRKGMILSTLLKLKQIVD----------HP-A------------L----------------------L-K------------GG-EQ-------------------S---VRRS-----GKMIRTMEIIEEAL--D-EGDK-----IAIFTQFVDMGKIIRNIIEKELNT----EVPFL--YGELSKKERDDIISKFQ-NNP-S--V-K--F--IV--LSVKAGGFGINLTSANRVIHFDRWW-----DQATDRV---YRIGQ-T-RNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIIS-SGDSWI-TELSTEELRKVIELSV------------------------------------------------------------------------
21 Fugue 71.2927% 13 - C2 -1Z3I ? X:[1-644] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVV-DPVLSKVLRPHQREGVKFLWDCVTGRRI-----E-----NSYGCIMADEMGLGKTLQCITLIWTLLKQSP------DCKPEIDKVI----V-VSPS-SLVRNWY-NEVGKWLG--GR--V--QPVAIDGGSKDEID-SKLV------NFIS----------QQGMRIPT-PILIISYETFRLHAE-----V--L---HKGKVGLVICDEGHRLKN--S---D--NQTYLALNSM---------NAQRRVLISGTPIQNDLLEYFSLVHFVN-------SGILGT-----------AQEFKKRF----EIPILKGR-----------DADASDKDRAAGEQKLQELISIVN------------------------------------RCL--IRRT------------SDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKP-------------------------VESL---QTG-KISVSSLSSITSLKKLCN----------HP-A------------L----------------------I-Y------------EK-CLTGEEGFDGALDLFPQNYSTKAVEPQLS-----GKMLVLDYILAMTR--TTTSDK-----VVLVSNYTQTLDLFEKLCRNR-RY----LYVRL--DGTMSIKKRAKIVERFN-NP--S--S-P--EFIFM--LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV---WRDGQ-K-KTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVD-EEQDVE-RHFSLGELRELFSLNEKTLSDTHDRFRCRRCVNGRQVRPPPDDSDCTCDLSNWHHCADKRGLRDPVLQASWDAAVSFVFHQRSHEDQR
22 Fugue 68.3326% 37 - C2 -3MWY CHD1_YEAST W:[36-783] DFHGIDIVINHRLKTSKTVPDLNNCKEN---------YEFLIKWTDESH----------------LHNTWETYESIGQ--------VRGLKRLDNYCKQFI-------------------------------IEDQQVRLDPYVTAEDIEIMDMERERRLDEFEEFHVPERIIDSQRASLE--------DGTSQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQNREN-SKILPQYSSNYTSQRPRFEKLSVQPPFIKG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GELRDFQLTGINWMAFL-----W-----S-----KGDNGILADEMGLGKTVQTVAFISWLIFARR------QNGPH----I----I-VVPL-STMPAWL-DTFEKWAP--D---L--NCICYMGNQ--KSR-DTIR------EYEF----------YTNPKTMKFNVLLTTYEYILKDRA-----E--L---GSIKWQFMAVDEAHRLKN--A---E--SSLYESLNSF---------KVANRMLITGTPLQNNIKELAALVNFLM-------PGRFNQ----------------------------DEE-----------Q-----------EEYIHDLHRRIQ------------------------------------PFI--LRRL------------KKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNY---------------------------------------SFSLLNIMNELKKASN----------HP-Y------------L----------------------F-DNAEERVLQKFMTRE-NV-------------------LRGLIMSS-----GKMVLLDQLLTRLK--K-DGHR-----VLIFSQMVRMLDILGDYLSIK-GI----NFQRL--DGTVPSAQRRISIDHFN-SP--D--S-NDFV--FL--LSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARA---HRIGQ-K-NHVMVYRLVSKDTVEEEVLERARKKMIL-EYNEP-N-AGEL-SAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHLGGEEFLKQFE-------------------------------
32 HHSearch 68.2328% 9 - C2 -1Z3I ? X:[44-573] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHVVV-DPVLSKVLRPHQREGVKFLWDC-----V-----TGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKP--EIDKV----I----V-VSPS-SLVRNWY-NEVGKWLG--GR--V--QPVAIDGGSKDEIDSKLVNFISQQGMRIP----------T--------PILIISYETFRLHAE-----V--L---HKGKVGLVICDEGHRLKN--S---D--NQTYLALNSM---------NAQRRVLISGTPIQNDLLEYFSLVHFVN-------SGILGT-----------AQEFKKRF----EIPILKGRDADASDKDRAAG-----------EQKLQELISIVN------------------------------------RCL--IRRTS----------DI--LSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKP-------------------------VESL---Q-TGKISVSSLSSITSLKKLCN----------HP-A------------L----------------------I-Y------------EK-CLTGEEGFDGALDLFPQNYSTKAVEPQLS-----GKMLVLDYILAMTRT-T-TSDK-----VVLVSNYTQTLDLFEKLCRNR-RY----LYVRL--DGTMSIKKRAKIVERFN-NP--SSPE-F--I--FM--LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV---WRDGQ-K-KTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEE-QDVE-RHFSLGELRELFSLNEK-----------------------------------------------------------------------
3 PsiBlast_PDB 62.8527% 39 - C2 -1Z3I ? X:[40-571] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLPVHVVVDPVLSKVLRPHQREGVKFLWDC-----VTGRRIE-----NSYGCIMADEMGLGKTLQCITLIWTLLKQSP------DCKPE----IDKVIV-VSPS-SLVRNWY-NEVGKWLG--G---RVQPVAIDGGSK----D-EIDS------KLVNFISQQGMRIPT--------PILIISYETFRLHAE-----V--L---HKGKVGLVICDEGHRLKN--S---D--NQTYLALNSM---------NAQRRVLISGTPIQNDLLEYFSLVHFVN-------SGILGT-----------AQEFKKRF----EIPILKGR-----------DADASDKDRAAGEQKLQELISIVN------------------------------------RCL--IRRT------------SDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQA-K-------------------------PVES---LQTGKISVSSLSSITSLKKLCN----------HP-A------------LIYEKCLTGEEGFDGALDLFPQNY-S------------TK-AV-------------------EPQLSGKM-----LVLDYILAMTRT----T-TSDK-----VVLVSNYTQTLDLFEKLCRNRRYL----YVR-L--DGTMSIKKRAKIVERFN-NP--S--S-P--E--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV---WRDGQ-K-KTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVD-E-EQDVERHFSLGELRELFSLN-------------------------------------------------------------------------
35 HHSearch 51.8118% -14 - C2 -3DMQ RAPA_ECOLI A:[147-637] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRGQRTSLIPHQLNIAHDVGR------------R-----HAPRVLLADEVGLGKTIEAGMILHQQLLSG-------AAERV----L----I-IVPE-TLQHQWL-VEMLRRFN------L--RFALFDDERYAEAQHDAYN------PFDT----------E--------QLVICSLDFARRSKQRLE--H--L---CEAEWDLLVVDEAHHLVW--SEDAP--SREYQAIEQLAE-------HVPGVLLLTATPEQLGMESHFARLRLLD-------PNRFHD-----------FAQFVEEQ----KNYCPVADAVAMLLAGNKLS-----------NDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVL--FRNTR----------N---GVKGFPKRELHTIKLPLPTQYQTAIKVS------------------------------------------GIMGARKSAEDRARDMLY----------PE-R------------I----------------------Y-Q------------EFEGD-------------------NATWWNFD-----PRVEWLMGYLTSH-----RSQK-----VLVICAKAATALQLEQVLREREGI----RAAVF--HEGMSIIERDRAAAWFA-EEDTG--A-Q--V--LL---CSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL---DRIGQ-A-HDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCP------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 47.5825%-164 - C2 -2HJV - DBPA_BACSU A:[241-316] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DS-----CIIFCRTKEHVNQLTDELDD-LGY----PCDKI--HGGMIQEDRFDVMNEFK-RG--E--Y-R--Y--LV---ATDVAARGIDIENISLVINYD------------------------------------------------------------------------------------------------------------------------------------------------------------
27 Fugue 47.4712% -35 - C2 -4A2Q - ? A:[1-791] ---------------------------------MTADEKRSLQCYRRYIERS--------------LNPVYVLGNMTDWLPDELRERIRKEEERGVSGAAALFLDAVLQLE-------------ARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM----------------------------LEVDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELW-DKARSYQIELAQPAIN-----------GKNALICAPTGS---GKTFVSILICEHHFQNMPAG--------------RKAKVVFL----ATKVPVYEQQKNVFKHHFERQGYSVQGISG----ESVEKVIEDSDIIVVT-PQILVNSFEDGTLTSLSIFT-----------------------------LMIF-----D-----E-----------CHNTTGNHPYNVLMTRYLEQKFNSA------SQLPQ----I----LGLTAS-VGVGNAK-NIEETIEH--I---C--SLCSYLDIQ-----------------------------------------AISTVRENIQELQ-----R--F---MNKPEIDVRLVKRRIHNP--F---A--AIISNLMSET---------EALMRTIDFGTQNYEHWIVVTQRKCRLL--------------------------QLEDKE----EESRICRA-----------L-----------FICTEHLRKYND------------------------------------ALI--ISEDA----------RIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEK-------------------------------------------------------------------------------------------------------------------------EP-EL-------------------IALSKDET-----NENPKLEELVCILD--D-AYRYNPQTRTLLFAKTRALVSALKKCME------------------------ENPILNYIK-PG--V--L-D--N--RL--LIATSVVQ------CNLVVLYEYSGNVTKMIQVGSKC---ILVT-------------SKTEVVENEKCNRYKEEMMNKAVEK-I-QKWD-EETFAKKIHNLQMKERVL----------------------------------------------------------------------
41 HHSearch 45.6517% -3 - C2 -2FWR ? A:[91-456] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EISLRDYQEKALERWLV-------------------DKRGCIVLPTGSGKTHVAMAAINEL------------STPT----L----I-VVPTLALAEQWK-ERLGIFGE--E---Y---VGEFSGRI-----------------KEL----------K--------PLTVSTYDSAYVNAE-----K--L---G-NRFMLLIFDEVHHLPA--E---S----YVQIAQMS---------IAPFRLGLTATFEREDGRHEILKE-VVG-------GK------------------------------------------------------------------------------------------------------------V--FELFP----------DS-LAGKHLAKYTIKRIFVPLAEDERVEYEKREKVYKQ-------------------------FLRA---RG------ITLRRAEDFNKIVM----------AS-GYDERAYE-----A----------------------LRA------------WE-EA-------------------RRIAFNSK-----NKIRKLREILER----H-RKDK-----IIIFTRHNELVYRISKVFL----------IPAI--THRTSREEREEILEGFR-TG--R--F-R--A--IV---SSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGRI---LRPSK-GKKEAVLYELISRGTG--------------------------------------------------------------------------------------------------------------------
23 Fugue 44.7716% 21 - C2 -1WP9 ? A:[1-486] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVLRRDLIQPRIYQEVIYAKC-----K-----E-----TNCLIVLPT--GLGKTLIAMMIAEYRLTKYG------GK--V----L----M-LAPT-KPLVLQHAESFRRLFN--L---P--PEKIVALTGEKSPE-ERSK------AWAR----------A--------KVIVATPQTIENDLL-----AGRI---SLEDVSLIVFDEAHRAVGNYA---Y--VFIAREYKRQA--------KNPLVIGLTASP-GSTPEKIMEVINNLG-------IEHIEYRSENSPDVRPYVKGIRFEW----VRVDLPEI-----------Y-----------KEVRKLLREMLR------------------------------------DAL--KPLAETGLLESSSPDIPKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLH-------------------------HAIE---LLETQGLSALRAYIKKLYEEAKAGSTKASKEIFS-D------------K----------------------R-M------------KK-AI-------------------SLLVQAKEIGLDHPKMDKLKEIIREQL--Q-RKQNSK---IIVFTNYRETAKKIVNELVKDGIK----AKRFV--GQASKQREQKLILDEFA-RG--E--F-N--V--LV--AT-SVGEEGLDVPEVDLVVFYE---PVPSAIRSIQRR---GRTGR-H-MPGRVIILMAKGTRDEAYYWSSR-----------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 44.1323%-119 - C2 -3DMQ - RAPA_ECOLI A:[490-609] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVEWLMGYLTSHR--S-Q--K-----VLVICAKAATALQLEQVLREREGI----RAAVF--HEGMSIIERDRAAAWFA-EE--D--TGA--Q--VL--LCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRL---DRIGQ-A-HDIQIH----------------------------------------------------------------------------------------------------------------------------
52 HHSearch 43.5916% -13 - C2 -4LJY PRP5_YEAST A:[72-425] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSLTPIQSQALPAIMS-------------------GRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMG----L----I-LAPTRELALQIH-EEVTKFTE--ADTSI--RSVCCTGGSEMKK--QITD------LKRG----------T--------EIVVATPGRFIDILTLNDGKL--L---STKRITFVVMDEADRLFD--L---GFEPQITQIMKTVR--------PDKQCVLFSATFPNKLRSFAVRVLHS----------PI------------------------------SI---------------------------------------------------------------------------T--INSKG----------M---VN---ENVKQKFRICHS-ED--EKFDN------------------------------------------------LVQLIHERSEF------------------------------------------------------------------------------------------------FD-----EVQS---------------DAK-----AIIFVSSQNICDFISKKLLNA-GI----VTCAI--HAGKPYQERLMNLEKFK-RE--K--N-S--I--LL---CTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRT---ARGSR-S-GTAITLLL--------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 43.3829%-138 - C2 -3PEV A:[38-134] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S-----SIIFVATKKTANVLYGKL-KSEGH----EVSIL--HGDLQTQERDRLIDDF--RE--G--R-S--K--VL--ITTNVLARGIDIPTVSMVVNYDL---PTLANGQADPATYIHRIGR-------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 42.0614% -23 - C2 -2OCA - UVSW_BPT4 A:[109-467] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NKRIEPHWYQKDAVFEGLV-------------------NRRRILNLPTSAGRSLIQALLARYYLEN--------YEGKI----L----I-IVPTTALTTQMA-DDFVDYRL--FSH-A--MIKKIGGGASKDD-----K------YKND----------A--------PVVVGTWQTVVKQPK-----E--W----FSQFGMMMNDECHLATG---------KSISSIISGLN--------NCMFKFGLSGSL-RDGKANIMQYVGMFG-------EIFKPV-----------T--------------T----------------------------------S----------------------------------------------------------------------ELKINSIFLRYPDEFTTKLK---GK-------------------------------------------TYQE---EIKII----------------------------------------------------------------------------------------------TGLS-----KRNKWIAKLAIKLA--Q-KDEN-----AFVMFKHVSHGKAIFDLIKNE-YD----KVYYV--SGEVDTETRN-IMKTLAENG--K--G-I--I--IV--ASYGVFSTGISVKNLHHVVLAHGVKSKIIVLQTIGRV---LRKHGSK-TIATVWDLIDDAGVKPKSANT-------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 42.0629%-136 - C2 -3RRM DBP5_YEAST A:[245-339] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S-----SIIFVATKKTANVLYGKL-KSEGH----EVSIL--HGDLQTQERDRLIDDF--RE--G--R-S--K--VL--ITTN------DIPTVSMVVNYDL---PTLANGQADPATYIHRIGR-------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 41.9729%-131 - C2 -3PEU A:[38-134] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S-----SIIFVATKKTANVLYGKL-KSEGH----EVSIL--HGDLQTQERDRLIDDF--RE--G--R-S--K--VL--ITTNVLARGIDIPTVSMVVNYDL---PTLANGQADPATYIHRIGR-------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 41.3829%-141 - C2 -5ELX ? A:[242-336] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S-----SIIFVATKKTANVLYGKL-KSEGH----EVSIL--HGDLQTQERDRLIDDF--RE--G--R-S--K--VL--ITTNVLARGIDIPTVSMVVNYDL---PTLANGQADPATYIHRIGR-------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 41.0815% 9 - C2 -3TBK DDX58_MOUSE A:[3-529] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKPRNYQLELALPAKK-------------------GKNTIICAPTGCGKTFVSLLICEHHLKKFPCG----QKGKV----V----F-FANQIPVYEQQA-TVFSRYFERLG---Y--NIASISGATSDSV--SVQH------IIED----------N--------DIIILTPQILVNNLN-----N--GAIPSLSVFTLMIFDECHNTSK--N---H--PYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGDAKTAEEAMQHICKLCAALDASVIAT-----------VRDNVAELEQVVYKPQKISRKV---------A-----------SRTSNTFKCIIS------------------------------------QLMKETEKLA----------KD--VSEELGKLF-QIQ---NREFGTQKYEQWIVGVHKACSVFQMADKEEESRVCKALFLYTSHLRKYNDALIISEDAQMTDALNYLKAFFH----------DVRETERELTRRFEEKL----------------------E-E------------LE-KV-------------------SRDPSNEN-----PKLRDLYLVLQEEYHLK-PETK-----TILFVKTRALVDALKKWIEEN-PALSFLKPGILTG----------------------D--N-N--I--LI---ATSVADEGIDIAECNLVILYEYVGNVIKMIQTRGR----GRAR-----DSKCFLLTSSADVIEKEKANMIKEKIMNESILR------------------------------------------------------------------------------------------------