@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0248: (2015-12-28 )
MTDSTRDVPVFKLYGAPLEWPTPDLLHCESIPARSRLHDWEIKPHRHADLAQLLYVRKGWAQLQVEGEPTRVEQPSIQFVPPLCIHGFQFSERIDGYVLTLAAPLLARLQAHLGAQRQALEAPGLYPVGADRRYIDTLFDAIDGEYAGAAPARELLLQSLIGVLAVWLGRQVMVRRAEARPGRGQEYLSAFSQLVERHFREHLGIDEYARRLGISPAHLNGVARRLSGQTALGIVHQRLLLEAKRDLVYTAMTVNEIADRLGFSEPAYFTRFFKRLSGVSPSVFRKGD

Atome Classification :

(20 SA) ----------------------------------------------------------------.........10........20......----.--.30........40........50.........60...--...--..70....--....80----........90.----.......100..-----.....110.......120.....------..130.....------..140.......150.......160-----.......170.......180--........190.......-200.---.......210.......220.......230.......240.......--250.......260.......270.......280......--------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------MTDSTRDVPVFKLYGAPLEWPTPDLLH----C--ESIPARSRLHDWEIKPHRHADL-AQLLYVRKGWAQLQ--VEG--EPTRVEQP--SIQFVP----PLCIHGFQFSE----RIDGYVLTLAAP-----LLARLQAHLGAQRQALEAPGLYP------VGADRRYIDT------LFDAIDGEYAGAAPARELLLQSLIG-----VLAVWLGRQVMVRRAEARP---GRGQEYLSAFSQLVERHF-RE-H---LGIDEYARRLGISPAHLNGVARRLSGQTALGIVHQRLLLEAKRDLVY--TAMTVNEIADRLGFSEPAYFTRFFKRLSGVSPSVFRKGD--------------
45 Fugue 82.9918% -61 - C2 -4FE7 XYLR_ECOLI A:[21-409] MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEFRWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIA----TDNYALVESAFLHLKEKGVNRFAFY-GLPESSGKRWATER--EYA--FRQLVAEEKYRGVVYQ----GLETAPENWQH----AQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYR---SLTDPAVIQAMHYIRNHA-CK-G---IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS--TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE------------
42 Fugue 79.6813% -94 - C2 -3GBG TCPN_VIBC3 A:[4-273] --------------------------------------------------------------------KKSFQTNVYRMSK--------------------FDTYIFNNLYINDY-------KMFWIDSGIAKLIDKNCL--VSYEINSS--SIILLKKNSIQRFSLTSLSDE----NINVSVITISDS-----FIRSLKSYILGNKDLLLWN------------CEHNDIAV------LSEVVNG-FREINYSDEFLKVFFSG-----FFSKVEKKYNS-----IFI---TDDLDAMEKISCLVKSDI-TR-N---WRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKT--GEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV-----------
21 HHSearch 78.1513%-109 - C2 -3GBG TCPN_VIBC3 A:[20-269] -------------------------------------------------------------------------------------------------------------YIFNNLYI-ND-YKMFWIDSGIAKLI--DKNCLVSYEINSS--SIILLK----KNSIQRFSLTSLSDENINVSVITISDS-----FIRSLKSYILG------NKDLLL------WNCEH-NDIA------VLSEVVNGFRE-INYSDEFLKVFFS-----GFFSKVEKKYNS----IFI---TDDLDAMEKISCLVKSDI-TR-N---WRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKT--GEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML--------------
27 HHSearch 68.1622% -98 - C2 -3OOU ? A:[4-106] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPIIQNVLSYITEHF-SE-G---MSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQ--TKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIH--------------
43 Fugue 67.0523% -76 * C2 *1D5Y ROB_ECOLI A:[1-119] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QAGIIRDLLIWLEGHL-DQ-P---LSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRL--TARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLG
26 HHSearch 66.4228% -96 - C2 -2K9S - A:[3-105] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRVREACQYISDHL-ADSN---FDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLST--TRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGC--------------
23 HHSearch 66.2522% -94 - C2 -3MN2 ? A:[2-105] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAVRQVEEYIEANW-MR-P---ITIEKLTALTGISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLLSDGATPTTVTAAALSCGFSNLGHFARDYRDMFGEKPSETLQRA--------------
25 HHSearch 66.1022% -92 - C2 -3OIO ? A:[6-108] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPKLTEAVSLMEANI-EE-P---LSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQ--TSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQR--------------
22 HHSearch 65.4426% -83 - C2 -3W6V ? A:[37-139] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDPLAEVVAWALEHL-HE-Q---FDVETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLLET--SDYSVDEVAGRCGFRSPVALRGHFRRQLGSSPAAYRAAY--------------
29 HHSearch 64.8521% -92 - C2 -3LSG ? A:[2-103] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAKELIQNIIEESYTDS-Q---FTLSVLSEKLDLSSGYLSIMFKKNFGIPFQDYLLQKRMEKAKLLLLT--TELKNYEIAEQVGFEDVNYFITKFKKYYQITPKQYRE----------------
3 PsiBlast_PDB 64.2625% -78 - C2 -4FE7 - XYLR_ECOLI A:[314-404] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRNHA-CK-G---IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS--TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN--------------
1 PsiBlast_PDB 64.2030% -76 - C2 -2K9S - A:[10-105] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYISDHL-ADSN---FDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLST--TRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGC--------------
4 PsiBlast_PDB 63.4525% -79 - C2 -3OOU ? A:[14-105] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITEHF-SE-G---MSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQ--TKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIH--------------
24 HHSearch 59.7221% -78 - C2 -1BL0 MARA_ECOLI A:[9-112] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAITIHSILDWIEDNL-ES-P---LSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE--SNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTN--------------
6 PsiBlast_PDB 59.6129% -67 - C2 -3W6V ? A:[50-133] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HL-HE-Q---FDVETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLLET--SDYSVDEVAGRCGFRSPVALRGHFRRQLGSSPAAYRAAY--------------
30 HHSearch 58.8725% -82 - C2 -1D5Y ROB_ECOLI A:[3-103] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIIRDLLIWLEGHL-DQ-P---LSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRL--TARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSP--------------
2 PsiBlast_PDB 58.2825% -59 - C2 -4FE4 - XYLR_ECOLI A:[294-384] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRNHA-CK-G---IKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLIS--TTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVN--------------
5 PsiBlast_PDB 56.4626% -61 - C2 -1D5Y ROB_ECOLI A:[12-104] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEGHL-DQ-P---LSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRL--TARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSP--------------
50 Fugue 56.1311% -73 - C1 -1FY7 ESA1_YEAST A:[5-277] --------------------------------------------------------ARVRNLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFT--LQYFGSKKQYERYRKKCTLRHPPGNEIYRDDYVSFFE--IDG--RKQRTWCR--NLCLLS----KLFLDHKTLYY----DVDPFLFYCMTR-----RDELGHHLVGYFSKEKESADGYN------VAC---------------------ILTLPQYQRMGYGKLLI-----EFSYELSKKENKVGSPEKPLSDLGLLSYRAYWSDTLITLL-VE-HQKEITIDEISSMTSMTTTDILHTAKTLN-------------ILRYYKGQH--IIFLNEDILDRYNRLKAKKRRTIDPNRLIWKPP--------------------
8 PsiBlast_PDB 55.8024% -69 - C2 -1XS9 MARA_ECOLI A:[23-113] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEDNL-ES-P---LSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE--SNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTN--------------