@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA1101: (2016-01-26 )
MADALIDSQVPAKSGGAGMLKKSFPGLSFLDNLSEMTMLRQIGLLVGLAASVAIGFAVVLWSQQPDYKPLYGSLNGVDANRVVEALTAADIPYKVEPNSGALLVKADDLGRARMKVASAGVAPTDNNVGFEILDKEQALGTSQFMEATNYRRGLEGELARTVSSLNNVKAARVHLAIPKSSVFVRDDRKPSASVLVELYPGRSLEPSQVMAIVNLVATSVPELDKSQVTVVDQKGNLLSDQQELSELTMAGKQFDFTRRMEGLLTQRVHNILQPVLGNGRYKAEVSADVDFSAVESTSEMYNPDQPALRSEQRNNEERQNSSGPQGVPGALSNQPPGPASAPQQATASAPADYVAPGQPLKDANGQTIIDPKTGKPELAPYPTDKRDQTTRNYELDRSISYTKQQQGRLRRLSVAVVLDDQMKVDAKTGEVSHQPWSADELARFTRLVQDSVGYDASRGDSVSVINAPFAPAQAEEIDSIPFYSQPWFWDIVKQVLGVLFILVLVFGVLRPVLSNITGGGKGKSLAGGGGRDGDLALGESGLEGSLADDRVSIGGPSSILLPSPTEGYDAQLNAIKNLVAQDPGRVAQVVKEWINADE
Atome Classification :
(20 SA)
-...-......10........20........30........40........50........60........70........80........90.--.-...---..------------.100-.......-..110--.......120------------------.........130.-....-...140.......150.......160---------........170.......180.....-..190.......200.......210....-...--220.......230.......240.......250.......260....----...270..-....-.280.......290.......---300.......310.......320.-......330.......340.......350------.......360.......370.......380.......390.......400.......410......-.420.......430.......440..------.....450-.......460..-.....470.......480.......490.......500.......-510.......520---..-----......530.......540.......550.......560.......570--.......580.......590......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-MA
D
-
A
LIDSQVPAKSGGAG
M
L
K
KSFPG
L
S
F
L
D
N
L
S
E
M
T
M
L
R
Q
I
G
L
L
V
G
L
A
A
S
V
A
I
G
F
A
V
V
L
WSQQPDYK
P
L
YGSLNGV
D
A
N
R
V
V
E
A
L
T
AADI
P
--
Y
-
K
VE---PN------------S
G
---
A
L
L
V
KAD-DLG
R
A
--
R
M
KVASAG--------------------VAPTDNNV
G
F
-
E
I
-L
D
K
E
-QAL
G
T
S
Q
F
M
E
A
T
N
YRRGL
E
G
E
L
A
R
T
----------
V
S
S
LNNV
K
A
A
R
V
H
L
AIPKS
S
V
F
V
RDD-RKPS
A
S
V
L
V
E
LYPGRSL
E
P
S
Q
V
M
A
I
V
N
L
V
-
A
TS--VPELDKS
Q
V
T
V
V
DQKGNLL
S
D
Q
Q
E
L
S
E
L
T
MAGKQ
F
D
F
T
R
R
M
E
G
L
L
T
Q
----
R
V
H
N
I
L
Q
P
-
V
LGN-G
R
Y
K
A
E
V
SADVD
F
S
A
V
E
S
T
S
E---MYNPDQP
A
L
R
S
E
QRNNEERQNSSG-PQGVPGALSNQPPGPASAPQQATASAPAD------YVAPGQPLKDANG
Q
T
I
IDPKTGKPELAPYPTDKRDQTTRNYELDRSI
S
Y
T
K
Q
Q
QGR
L
R
R
L
S
V
A
V
V
L-DDQ
M
K
V
DAKTGEVSHQPW
S
A
D
E
L
A
R
F
------
T
R
L
V
Q
D
SV-GYDASRGD
S
V
S
V
-INAPFAPA
Q
A
E
EIDSIPFYSQ
P
W
F
W
D
I
V
K
Q
V
L
G
V
L
F
I
L
V
L
V
F
G
V
L
-
R
P
V
L
S
NITGGGK----GK-----SLAGGGGRDGDLALGESGLEGSLADD
R
V
SIGGP
S
S
I
LLPSPTEG
Y
D
A
Q
L
--
N
A
I
K
N
L
V
AQDP
G
R
V
A
Q
V
V
K
E
W
INADE
23
Fugue
76.98
20%
-24
- C5 -
2IUT
3
FTSK_PSEAE
A:
[70-477]
L
P
P
L
-
S
L
L
D
P
A
E
V
K
Q
-----------------
K
S
Y
S
P
E
S
L
E
A
M
S
R
L
L
E
I
K
L
K
E
F
G
V
E
V
S
V
D
S
V
H
P
G
P
-------------------
V
I
T
R
F
E
I
Q
--
P
-
A
A
G
---
V
K
------------
V
S
---
R
I
S
N
L
A
K
-
D
L
A
R
S
L
A
V
I
S
V
R
V
V
E
--------------------
V
I
P
G
K
T
T
V
G
I
-
E
I
-
P
N
E
D
R
Q
M
V
R
F
S
E
V
L
S
S
P
E
Y
D
------------------------
E
H
K
S
T
V
P
L
A
L
G
H
D
I
G
G
R
P
I
I
T
D
-
L
A
K
M
P
H
L
L
V
A
G
T
T
G
S
G
K
S
V
G
V
N
A
M
L
L
S
I
L
-
F
K
S
--
T
P
S
--
E
A
R
L
I
M
I
D
P
K
------
M
L
E
L
S
I
Y
------------------
E
----
G
I
P
H
L
L
C
P
-
V
V
T
D
--------------------------
M
K
E
A
A
N
A
L
R
W
S
V
A
E
M
E
R
R
Y
R
L
M
A
-
A
M
G
V
------------------------------------
R
N
L
A
G
F
N
R
K
V
K
D
A
E
E
A
G
T
P
L
T
D
P
L
F
R
R
E
S
---------------
P
D
D
E
P
P
Q
L
S
T
L
P
T
I
V
V
V
-
V
D
E
F
---------------
A
D
M
M
M
I
V
------
G
K
K
V
E
E
L
I
-
A
R
I
A
Q
K
A
R
A
A
G
---------------------------------------
I
H
L
I
L
A
T
Q
-
R
P
S
V
D
V
I
T
G
L
I
K
----
A
N
IP
T
R
I
A
F
Q
V
S
S
K
I
D
S
R
T
I
L
D
Q
G
G
A
E
Q
L
L
G
H
G
D
M
L
Y
L
P
P
G
T
-
G
L
P
I
R
V
H
G
A
F
V
S
D
--
D
E
V
H
R
V
V
E
A
W
K
L
R
G
A
P
D
Y
I
E
D
I
L
A
G
-
12
HHSearch
67.13
27%
-90
- C4 -
1YJ7
3
?
A:
[2-167]
--------------------------------------------------------------------
K
E
Q
L
Y
T
G
L
T
E
K
E
A
N
Q
M
Q
A
L
L
L
S
N
D
V
N
V
S
K
-
E
M
D
---
K
S
G-----------
N
M
---
T
L
S
V
A
A
A
-
D
F
V
R
A
--
I
T
I
L
N
N
N
G
--------------------
F
-
P
K
K
K
F
A
D
I
-
E
V
I
F
P
--------
S
P
S
Q
E
N
A
K
I
N
Y
L
K
E
Q
D
I
E
R
L
----------
L
S
K
I
P
G
V
I
D
C
S
V
S
L
N
V
-------------
S
S
A
A
V
L
V
I
S
S
P
E
V
N
L
A
P
S
-
V
I
Q
I
K
N
L
V
-
K
N
S
--
V
D
D
L
K
L
E
N
I
S
V
V
I
K
S
S
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
65.97
13%
-20
- C1 -
3M6A
1
LON1_BACSU
A:
[7-531]
-
T
G
E
V
Q
T
L
T
E
K
I
E
E
A
G
M
P
D
H
V
K
E
T
A
L
K
E
L
N
R
Y
E
K
I
P
S
S
S
A
E
S
S
------
V
I
R
N
Y
I
D
W
L
V
A
L
P
W
T
D
E
T
D
D
K
L
--------
D
L
K
E
A
G
R
L
L
D
E
E
H
----
H
-
G
L
E
---
K
V
------------
K
E
---
R
I
L
E
Y
L
A
-
V
Q
K
L
T
--
K
S
L
K
G
P
I
L
--------------------
C
L
A
G
P
P
G
V
G
K
-
T
S
-
L
A
K
S
-
I
A
K
S
L
G
R
----
K
F
V
R
I
S
L
G
G
R
I
I
Q
G
----------
M
K
K
A
G
K
L
N
P
V
F
L
L
D
E
I
D
K
M
S
A
M
L
E
V
L
-
D
P
E
Q
N
S
S
F
S
D
H
Y
I
E
E
T
F
D
L
S
K
V
L
F
I
A
T
A
N
N
L
A
T
--
I
P
G
P
L
R
D
R
M
E
I
I
N
I
A
G
Y
T
E
I
E
K
L
E
I
V
K
D
H
L
L
P
K
Q
I
K
E
--------------------------
H
-
G
L
K
K
S
N
L
--
Q
L
R
D
Q
A
I
L
D
I
I
R
---
Y
Y
T
R
E
-----------------------------------
A
G
V
R
S
L
E
R
Q
L
A
A
I
C
------
R
K
A
A
K
A
I
V
A
E
E
R
K
R
I
T
V
T
E
K
N
L
Q
D
F
I
G
K
R
I
F
R
Y
G
Q
A
E
T
E
D
Q
V
G
V
V
T
G
L
A
Y
T
T
V
G
G
D
T
L
S
I
E
V
S
L
S
P
G
K
G
K
L
I
L
T
G
K
L
G
D
V
M
R
E
--
S
A
Q
A
A
F
S
Y
------
V
R
S
K
T
E
E
L
-
G
------------
I
E
P
D
F
-----
H
E
K
Y
D
I
H
I
H
V
P
E
G
A
V
P
K
D
G
P
A
A
G
I
T
M
A
T
A
L
V
S
A
L
T
G
R
A
V
S
R
E
V
G
M
T
G
E
I
T
LR
G
R
-----
V
L
P
I
G
G
L
K
E
K
A
L
G
A
H
R
--------------
A
G
L
T
T
I
I
A
P
K
D
N
E
K
D
I
E
D
I
P
E
S
V
R
E
G
L
T
F
I
L
A
S
H
L
D
E
V
L
E
H
A
L
V
---
20
Fugue
65.87
23%
-66
- C4 -
1YJ7
3
?
A:
[1-167]
-------------------------------------------------------------------
M
K
E
Q
L
Y
T
G
L
T
E
K
E
A
N
Q
M
Q
A
L
L
L
S
N
D
V
N
--
V
-
S
K
E
M
D
K
S
G
------------
N
M
---
T
L
S
V
A
A
A
-
D
F
V
R
A
--
I
T
I
L
N
N
N
G
--------------------
F
P
K
K
K
F
A
---------
D
I
-
E
V
I
F
P
S
P
S
Q
E
N
A
K
I
N
Y
L
K
E
Q
D
I
E
R
L
----------
L
S
K
I
P
G
V
I
D
C
S
V
S
L
N
V
S
S
A
A
V
L
V
I
S
S
-
P
E
V
N
L
-------------
A
P
S
V
I
Q
I
K
N
L
V
-
K
N
S
--
V
D
D
L
K
L
E
N
I
S
V
V
I
K
S
S
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
65.79
27%
-114
- C4 -
1YJ7
3
?
A:
[5-162]
-----------------------------------------------------------------------
L
Y
T
G
L
T
E
K
E
A
N
Q
M
Q
A
L
L
L
S
N
D
V
N
--
V
-
S
K
E
---
M
D
------------
K
S
G
N
M
T
L
S
V
A
A
A
-
D
F
V
R
A
--
I
T
I
L
N
N
N
G
--------------------
F
-
P
K
K
K
F
A
D
I
-
E
V
-
I
F
P
-------
S
P
S
Q
E
N
A
K
I
N
Y
L
K
E
Q
D
I
E
R
L
----------
L
S
K
I
P
G
V
I
D
C
S
V
S
L
N
V
-------------
S
S
A
A
V
L
V
I
S
S
P
E
V
N
L
A
P
S
-
V
I
Q
I
K
N
L
V
-
K
N
S
--
V
D
D
L
K
L
E
N
I
S
V
V
I
K
S
S
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
57.28
21%
-70
- C4 -
2Y9J
-
PRGK_SALTY
Y:
[21-190]
---------------------------------------------------------------------
K
D
L
L
K
G
L
D
Q
E
Q
A
N
E
V
I
A
V
L
Q
M
H
N
I
E
--
A
N
K
I
D
---
S
G
KL----------
G
Y
---
S
I
T
V
A
E
P
-
D
F
T
A
A
--
V
Y
W
I
K
T
Y
Q
--------------------
L
-
P
P
R
P
R
V
E
I
A
Q
M
-
F
P
A
--
D
S
L
V
S
S
P
R
A
E
K
A
R
L
Y
S
A
I
E
Q
R
L
E
Q
S
----------
L
Q
T
M
E
G
V
L
S
A
R
V
H
I
S
Y
D
I
D
A
G
E
N
G
R
P
P
K
P
V
H
L
S
A
L
A
V
Y
E
R
G
-
S
P
L
A
H
Q
I
S
D
I
K
R
F
L
-
K
N
S
--
F
A
D
V
D
Y
D
N
I
S
V
V
L
S
E
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
49.45
14%
-1
- C5 -
4ZOX
-
SQT1_YEAST
A:
[3-381]
-----------------------
M
S
N
N
S
L
T
Y
F
D
K
H
T
D
S
V
F
A
I
G
H
H
P
N
L
P
L
V
C
T
G
G
G
D
N
L
A
H
L
W
T
S
H
S
Q
P
P
K
F
A
G
T
L
T
G
Y
G
-
E
S
V
I
S
C
S
F
T
S
E
G
G
--
F
-
L
V
T
---
A
D
M-----------
S
G
---
K
V
L
V
H
M
G
-
Q
K
G
G
A
--
Q
W
K
L
A
S
Q
M
Q
EVEEIV
W
L
K
T
HPTIAR
T
F
A
F
G
A
T
D
G
S
V
W
C
-
Y
Q
-
I
N
E
Q
-
D
G
S
L
E
Q
L
M
S
G
F
V
H
Q
Q
D
C
S
M
G
E
F
I
N
T
DKGENT
L
E
L
V
T
C
S
L
D
S
T
I
V
A
W
N
C
F
T
G
Q
Q
L
F
K
I
T
Q
A
E
-
I
K
G
L
E
A
P
W
I
S
L
S
L
A
P
E
T
L
T
K
G
N
S
G
V
V
A
C
G
-
S
N
N
G
L
L
A
V
I
N
C
N
N
G
G
A
I
L
H
L
S
T
V
I
E
L
K
P
E
Q
D
E
L
D
A
S
I
E
S
I
S
W
S
S
K
F
S
L
M
A
I
G
L
---
V
C
G
E
I
L
L
Y
-
D
T
S
A
-
W
R
V
R
H
K
F
V
L
E
D
S
V
T
K
L
M
F
D
N
D
D
L
F
A
S
C
I
N
G
K
V
Y
Q
F
N
A
R
T
G
Q
E
K
F
V
C
V
G
H
N
M
G
V
L
D
F
I
L
L
H
P
V
A
N
T
G
T
E
Q
K
R
K
V
I
T
A
G
D
EG
V
S
L
V
F
E
V
P
N
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
47.52
23%
-63
- C4 -
3TUF
-
SP3AH_BACSU
A:
[144-213]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
M
T
A
L
S
E
V
E
G
T
E
K
Q
L
E
T
L
----------
I
K
-
T
Q
G
Y
E
D
A
L
V
N
A
-------------
E
G
D
K
I
N
I
T
V
K
S
-
D
--
K
H
S
K
S
K
A
T
A
I
I
D
L
V
-
A
K
E
--
I
K
T
M
--
K
D
V
A
V
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
44.11
31%
-8
- C4 -
2HFV
-
?
A:
[20-89]
-----------------------------------------------------------------
Q
G
H
L
R
E
L
L
R
T
N
D
A
V
L
L
S
A
V
G
A
L
L
D
G
A
D
I
G
--
H
-
L
V
L
---
D
Q
NMSILEGSLGV
I
P
R
---
R
V
L
V
H
E
D
-
D
L
A
G
A
--
R
R
L
L
T
D
A
G
--------------------
L
A
H
E
L
R
S
D
D
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
42.99
12%
24
- C4 -
2LEP
-
GLPG_ECOLI
A:
[2-54]
---------------------------------------------------------------------
L
M
I
T
S
F
A
N
P
R
V
A
Q
A
F
V
D
Y
M
A
T
Q
G
V
I
--
L
-
T
I
Q
---
Q
H
N-----------
Q
S
---
D
V
W
L
A
D
E
S
Q
A
E
R
V
--
R
A
E
L
A
R
F
L
--------------------
E
N
P
A
D
L
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
38.88
28%
35
- C4 -
1ZHV
-
?
A:
[80-124]
--------------------------------------------------------------------------------
V
L
S
V
I
S
P
L
S
T
N
G
I
G
--
I
F
V
V
S
T
--
F
D
------------
G
D
---
H
L
L
V
R
S
N
-
D
L
E
K
T
--
A
D
L
L
A
N
A
G
--------------------
H
S
L
L
L
E
H
H
H
H
-
H
H
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
37.65
17%
25
- C4 -
2GQC
-
?
A:
[2-57]
-------------------------------------------------------------------
S
A
V
Q
V
L
K
F
P
L
S
V
D
L
A
G
F
V
G
L
L
R
R
L
N
V
P
--
H
-
R
V
S
---
E
E
SG----------
Q
Q
---
V
L
W
V
P
D
E
R
L
A
E
Q
V
--
R
E
L
Y
R
R
Y
P
--------------------
E
G
D
P
Q
A
T
L
E
A
-
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
31.16
19%
65
- C4 -
3K9I
-
?
A:
[54-163]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
A
--
V
P
Y
Y
E
K
A
I
A
S
G
L
Q
G
K
D
L
A
E
C
Y
L
G
L
G
S
T
F
R
T
L
G
E
Y
R
K
A
E
A
V
L
A
N
G
V
K
Q
F
PNH
Q
A
L
R
V
F
Y
A
M
V
L
Y
N
L
G
R
Y
E
Q
G
V
E
L
L
L
K
I
I
A
E
T
S
D
D
E
---
T
I
Q
S
Y
K
Q
A
I
L
F
Y
A
D
K
L
D
E
T
W
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
30.77
24%
-29
- C4 -
2KHO
-
DNAK_ECOLI
A:
[158-219]
-------------------------------------------------------------------------
G
R
I
A
G
L
E
V
K
R
I
I
N
E
P
T
A
A
A
L
A
--
Y
-
G
L
D
---
K
G
------------
T
G
---
N
R
T
I
A
V
Y
-
D
L
G
G
G
--
T
F
D
I
S
I
I
E
--------------------
I
D
E
V
D
G
E
K
T
F
-
E
V
-
L
A
T
N
-
G
D
T
H
L
G
G
E
D
F
D
S
R
L
I
N
Y
L
V
E
E
F
K
K
D
----------
Q
G
I
D
L
R
N
D
P
L
A
M
Q
R
L
K
E
A
A
E
K
A
K
I
E
L
-
S
S
A
Q
Q
T
D
V
N
L
P
Y
I
T
A
D
A
T
G
P
K
H
M
N
I
K
V
T
R
-
A
K
L
--
E
S
L
V
E
D
L
V
N
R
S
I
E
P
L
K
V
A
L
Q
D
A
G
L
S
V
S
D
I
D
D
V
I
L
V
G
G
Q
T
R
M
P
M
V
Q
K
K
----
V
A
E
F
F
G
K
E
-
P
R
K
D
-
V
N
P
D
E
A
V
A
I
G
A
A
V
Q
G
G
V
L
T
G
D
---
V
K
D
V
L
L
L
D
V
T
P
L
S
L
G
I
E
T
M
G
G
V
M
T
-
T
L
I
A
K
N
T
T
I
P
T
K
H
S
Q
V
F
S
T
A
E
D
N
Q
S
A
V
T
I
------
H
V
L
Q
G
E
R
K
R
A
A
D
N
K
S
L
G
Q
F
N
L
D
G
I
N
P
A
P
R
G
M
P
Q
I
E
V
T
F
D
I
D
A
D
G
I
L
H
V
S
A
K
D
K
N
S
G
K
E
Q
K
I
T
I
K
A
S
-
S
G
L
N
E
D
E
I
Q
K
M
V
R
D
A
E
A
N
A
E
A
D
R
K
F
D
------
E
L
V
Q
T
R
N
Q
-
G
D
H
L
L
H
S
T
R
K
Q
V
-
E
E
A
G
D
K
L
P
A
D
D
K
T
A
I
E
S
A
L
T
A
L
E
T
A
L
K
G
E
D
K
A
A
I
E
A
K
M
Q
E
L
A
Q
V
S
-
Q
K
L
M
E
I
A
Q
--------------------------------------------------------------------------------------------
19
HHSearch
27.56
21%
110
- C4 -
1YJ7
-
?
A:
[135-164]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
A
P
S
-
V
I
Q
I
------
K
N
L
V
K
N
S
V
D
D
L
K
L
---
E
N
I
S
V
-
V
I
K
S
S
S
--------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
27.44
28%
55
- C6 -
2VRB
-
?
A:
[180-255]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
A
A
T
V
L
-
T
E
E
G
H
E
N
K
T
Y
N
L
V
S
N
Q
P
W
T
F
D
E
L
A
Q
I
L
S
E
V
S
G
K
K
V
V
H
Q
P
V
-
S
F
E
E
E
K
N
F
L
V
N
A
G
V
P
E
P
F
A
E
I
T
A
A
I
Y
D
A
I
S
K
G
E
A
S
K
T
S
D
D
L
Q
K
L
I
G
S
L
T
P
L
K
E
T
V
K
Q
A
-
L
---------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
27.02
27%
54
- C6 -
2JL1
2
?
A:
[180-255]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
A
A
T
V
L
-
T
E
E
G
H
E
N
K
T
Y
N
L
V
S
N
Q
P
W
T
F
D
E
L
A
Q
I
L
S
E
V
S
G
K
K
V
V
H
Q
P
V
-
S
F
E
E
E
K
N
F
L
V
N
A
G
V
P
E
P
F
T
E
I
T
A
A
I
Y
D
A
I
S
K
G
E
A
S
K
T
S
D
D
L
Q
K
L
I
G
S
L
T
P
L
K
E
T
V
K
Q
A
-
L
K
M
-------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
26.56
24%
-9
- C4 -
4JNE
3
DNAK_ECOLI
A:
[158-219]
-------------------------------------------------------------------------
G
R
I
A
G
L
E
V
K
R
I
I
N
E
P
T
A
A
A
L
A
--
Y
-
G
L
D
---
K
G
------------
T
G
---
N
R
T
I
A
V
Y
-
D
L
G
G
G
--
A
F
D
I
S
I
I
E
--------------------
I
D
E
V
D
G
E
K
T
F
-
E
V
-
L
A
T
N
-
G
D
T
H
L
G
G
E
D
F
D
S
R
L
I
N
Y
L
V
E
E
F
K
K
D
----------
Q
G
I
D
L
R
N
D
P
L
A
M
Q
R
L
K
E
A
A
E
K
A
K
I
E
L
-
S
S
A
Q
Q
T
D
V
N
L
P
Y
I
T
A
D
A
T
G
P
K
H
M
N
I
K
V
T
R
-
A
K
L
--
E
S
L
V
E
D
L
V
N
R
S
I
E
P
L
K
V
A
L
Q
D
A
G
L
S
V
S
D
I
D
D
V
I
L
V
G
G
Q
T
R
M
P
M
V
Q
K
K
----
V
A
E
F
F
G
K
E
-
P
R
K
D
-
V
N
P
D
E
A
V
A
I
G
A
A
V
Q
G
G
V
L
T
G
D
---
V
K
D
V
L
L
L
D
V
T
P
L
S
L
G
I
E
T
M
G
G
V
M
T
-
T
L
I
A
K
N
T
T
I
P
T
K
H
S
Q
V
F
S
M
G
G
A
V
T
I
H
V
L
Q
------
G
E
R
K
R
A
A
D
N
K
S
L
G
Q
F
N
L
D
G
I
N
P
A
P
R
G
M
P
Q
I
E
V
T
F
D
I
D
A
D
G
I
L
H
V
S
A
K
D
K
N
S
G
K
E
Q
K
I
T
I
K
A
S
S
G
L
N
-
E
D
E
I
Q
K
M
V
R
D
A
E
A
N
A
E
A
D
R
K
F
E
E
L
V
Q
------
T
R
N
Q
G
D
H
L
-
L
H
S
T
R
K
Q
V
E
E
A
G
-
D
K
L
P
A
D
D
K
T
A
I
E
S
A
L
T
A
L
E
T
A
L
K
G
E
D
K
A
A
I
E
A
K
M
Q
E
L
A
Q
V
S
Q
K
L
M
-
E
I
A
Q
Q
-----------------------------------------------------------------------------------------------
25
Fugue
26.22
18%
127
* C5 *
4GEQ
2
SPC24_YEAST
B:
[2-60]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
N
E
N
I
L
K
L
K
L
------
Y
R
S
L
G
V
I
L
D
L
E
N
D
Q
V
L
I
N
R
N
D
G
N
I
D
I
L
P
L
D
N
N
L
S
D
F
Y
K
T
K
Y
I
W
E
R
L
G
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
26.08
24%
-6
- C4 -
4JN4
3
DNAK_ECOLI
A:
[158-219]
-------------------------------------------------------------------------
G
R
I
A
G
L
E
V
K
R
I
I
N
E
P
T
A
A
A
L
A
--
Y
-
G
L
D
---
K
G
------------
T
G
---
N
R
T
I
A
V
Y
-
D
L
G
G
G
--
A
F
D
I
S
I
I
E
--------------------
I
D
E
V
D
G
E
K
T
F
-
E
V
-
L
A
T
N
-
G
D
T
H
L
G
G
E
D
F
D
S
R
L
I
N
Y
L
V
E
E
F
K
K
D
----------
Q
G
I
D
L
R
N
D
P
L
A
M
Q
R
L
K
E
A
A
E
K
A
K
I
E
L
-
S
S
A
Q
Q
T
D
V
N
L
P
Y
I
T
A
D
A
T
G
P
K
H
M
N
I
K
V
T
R
-
A
K
L
--
E
S
L
V
E
D
L
V
N
R
S
I
E
P
L
K
V
A
L
Q
D
A
G
L
S
V
S
D
I
D
D
V
I
L
V
G
G
Q
T
R
M
P
M
V
Q
K
K
----
V
A
E
F
F
G
K
E
-
P
R
K
D
-
V
N
P
D
E
A
V
A
I
G
A
A
V
Q
G
G
V
L
T
G
D
---
V
K
D
V
L
L
L
D
V
T
P
L
S
L
G
I
E
T
M
G
G
V
M
T
-
T
L
I
A
K
N
T
T
I
P
T
K
H
S
Q
V
F
S
M
G
G
A
V
T
I
H
V
L
Q
------
G
E
R
K
R
A
A
D
N
K
S
L
G
Q
F
N
L
D
G
I
N
P
A
P
R
G
M
P
Q
I
E
V
T
F
D
I
D
A
D
G
I
L
H
V
S
A
K
D
K
N
S
G
K
E
Q
K
I
T
I
K
A
S
S
G
L
N
-
E
D
E
I
Q
K
M
V
R
D
A
E
A
N
A
E
A
D
R
K
F
E
E
L
V
Q
------
T
R
N
Q
G
D
H
L
-
L
H
S
T
R
K
Q
V
E
E
A
G
-
D
K
L
P
A
D
D
K
T
A
I
E
S
A
L
T
A
L
E
T
A
L
K
G
E
D
K
A
A
I
E
A
K
M
Q
E
L
A
Q
V
S
Q
K
L
M
-
E
I
A
Q
Q
-----------------------------------------------------------------------------------------------