@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA1723: (2016-01-31 )
MRRTVKGLSRMALLALVLALGGCKVELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKGYPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEERDGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYDRISVVLVPSAGVRQVPLAPRFESVFSIQVAEHSRGRLLGLFGLLLALLLASNLAQFFWHRQRG

Atome Classification :

(20 SA) ....--------------------.....10........20-...----------.....30........40...------------------------.-....--50......---------.-------.60......-----------..70......---------..80........----90........100.......110.......120-----------......---..130.......140.....-..150.......160....---....170----------........180...--....190-----.........200---.......210-........220........230-.........240.-------.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MRRT--------------------VKGLSRMALLALVLALG-GCK----------VELYTGISQKEGNEMLALLR------------------------S-EGVS--ADKQADKD---------G-------TVRLLVEES-----------DIAEAVEVLK---------RKGYPRENFSTL----KDVFPKDGLISSPIEERARLNYAKAQEISHTL------------SEIDGV---LVARVHVVLPEERDGLGRKS-SPASASVFIKHAAD-VQLD---AYVPQI-----------KQLVNNGIEGLSYD--RISVV-------LVPSAGVRQVPL---APRFESVFS--IQVAEHSRG-RLLGLFGLLL---ALLLASNLAQFFW-------HRQRG
47 Fugue 95.6239%-128 * C4 *1YJ7 ? A:[1-167] -------------------------------------------MK----------EQLYTGLTEKEANQMQALLL------------------------S-NDVN--VSKEMDKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNVS--------------SAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSSS---------------------------------------------------------------------
21 HHSearch 94.3939%-136 - C4 -1YJ7 ? A:[2-167] --------------------------------------------K----------EQLYTGLTEKEANQMQALLL------------------------S-NDVNVSKEM--DKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNV--------------SSAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSSS---------------------------------------------------------------------
16 PsiBlast_CBE 93.9137%-129 - C4 -1YJ7 ? D:[2-168] --------------------------------------------K----------EQLYTGLTEKEANQMQALLL------------------------S-NDVN--VSKEMDKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNV-------------PSSAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSSSGQDG-----------------------------------------------------------------
1 PsiBlast_PDB 93.8137%-129 - C4 -1YJ7 ? A:[2-167] --------------------------------------------K----------EQLYTGLTEKEANQMQALLL------------------------S-NDVN--VSKEMDKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNV--------------SSAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSSS---------------------------------------------------------------------
17 PsiBlast_CBE 93.6637%-126 - C4 -1YJ7 ? C:[2-166] --------------------------------------------K----------EQLYTGLTEKEANQMQALLL------------------------S-NDVN--VSKEMDKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNV-------------PSSAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSS----------------------------------------------------------------------
18 PsiBlast_CBE 93.1137%-124 - C4 -1YJ7 ? B:[2-167] --------------------------------------------K----------EQLYTGLTEKEANQMQALLL------------------------S-NDVN--VSKEMDKS---------G-------NMTLSVAAA-----------DFVRAITILN---------NNGFPKKKFADI----EVIFP------SPSQENAKINYLKEQDIERLL------------SKIPGV---IDCSVSLNV-------------PSSAAVLVISSPE-VNLA---PSVIQI-----------KNLVKNSVDDLKLE--NISVV-------IKSSS---------------------------------------------------------------------
2 PsiBlast_PDB 83.7931%-113 - C4 -2Y9J - PRGK_SALTY Y:[22-187] --------------------------------------------------------DLLKGLDQEQANEVIAVLQ------------------------M-HNIE--ANKIDSGK---------L-------GYSITVAEP-----------DFTAAVYWIK---------TYQLPPRPRVEI----AQMFPADSLVSSPRAEKARLYSAIEQRLEQSL------------QTMEGV---LSARVHISYDIDAGENGRPP-KPVHLSALAVYERG-SPLA---HQISDI-----------KRFLKNSFADVDYD--NISVV-------LSER----------------------------------------------------------------------
20 HHSearch 82.5330%-101 - C4 -2Y9J - PRGK_SALTY Y:[22-190] --------------------------------------------------------DLLKGLDQEQANEVIAVLQ------------------------M-HNIE--ANKIDSGK---------L-------GYSITVAEP-----------DFTAAVYWIK---------TYQLPPRPRVEI----AQMFPADSLVSSPRAEKARLYSAIEQRLEQSL------------QTMEGV---LSARVHISYDID-AGENGRPPKPVHLSALAVYERG--SPLA--HQISDI-----------KRFLKNSFADVDYD--NISVV-------LSER----------------------------------------------------------------------
50 Fugue 67.3325% -37 * C5 *2W0C SPIKE_BPPM2 L:[1-335] MIVKKKLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLR----------TIVRQGVSIKGMNYTSVMLHTEYAQEIEYWVGDLDYSFQEQTTKS-RDVN--SFQIPLRD---------G-------VRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGV-DGLGDYT-SISVKPAFYITEGD-ETTD---TLIKYT-----------SYGSTGSHSGYDFDDNTLDVM-------VTLSAGVHRVFP---VETELDYDA--VQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILM-------ERT--
3 PsiBlast_PDB 63.4334%-128 - C4 -4OYC - PRGK_SALTY A:[4-96] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSPRAEKARLYSAIEQRLEQSL------------QTMEGV---LSARVHISY--------------VHLSALAVYERG-SPLA---HQISDI-----------KRFLKNSFADVDYD--NISVV-------LSE-----------------------------------------------------------------------
48 Fugue 54.0326% -62 - C4 -4W4M - PRGK_SALTY A:[5-65] -------------------------------------------KD----------KDLLKGLDQEQANEVIAVLQ------------------------M-HNIE--ANKIDSGK---------L-------GYSITVAEP-----------DFTAAVYWIK---------TYQLPP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55 Fugue 53.5316% -28 - C2 -19HC CYC9_DESDA A:[1-292] --AA--------------------LEPTDSGAPSAIVMFPV-GEKPNPKGAAMKPVVFNHLIHEKKIADCETCHH------------------------TGDPVS--CSTCHTVE---------GKAEGDYITLDRAMHAT-----------DIAARAKGNT---------PTSCVSCHQSET----KERRECAGCHAITTPKDDEAWCATCHDITPSM------------T-PSEM---QKGIAGTLLPGDNEALAAET-VLAEATVAPVSPML-APYK---VVIDALADKYEPSDFTHRRHLTSLMESIKDD--KLAQAFHDKPEILCATCHHR-SPLSLTPPKCGSCHTKEIDAADPGRP-NLMAAYHLEC---MGCHKGMAVARPRDTDCTTCHKAAA
22 HHSearch 53.4025% -26 - C4 -2HFV - ? A:[24-93] -------------------------------------------------------RELLRTNDAVLLSAVGALLD------------------------G-ADIG--HLVLDQNMSILEGSLGVI-------PRRVLVHED-----------DLAGARRLLT---------DAGLAHELRSDD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 52.7422% -17 - C4 -1ZHV - ? A:[81-126] -------------------------------------------------------------------LSVISPLS------------------------T-NGIG--IFVVSTFD---------G-------D-HLLVRSN-----------DLEKTADLLA---------NAGHSLLLEHHH----HHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 49.9824% -41 - C4 -3M05 ? A:[13-77] -------------------------------------------------------------VQDKDANYLSDQFI------------------------D-QNVR--ATKLSTTG---------GFLQSGNTTFMIGIEEE-----------RVPEVLEIIK---------KASHTREEFMTP----YPIKVQVGGATVLVLPVDQFERF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 48.9618% -23 - C4 -1ZVP - ? A:[87-130] ------------------------------------------------------------------TAAFATKLA------------------------E-HGIS--ANVIAGYY---------H-------D-HIFVQKE-----------KAQQALQALG---------EFAQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 45.6817% -78 - C4 -2XCZ ? A:[17-101] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSLLQELSSKL------------AELLGK---PEKYVMTSLQCGVPMTFSGN-TEPTCYVEVKSIGA-LDGSRTQEVSELV-----------CGHIEQNL-GIPAD--RIYIG-------FEDVPARLWGWN---GSTFG------------------------------------------------------
42 HHSearch 45.5510% -5 - C4 -2DT9 AK_THETH A:[112-157] ------------------------------------------------------------------PAKMFQAVA------------------------S-TGAN--IEMIATSE---------V-------RISVIIPAE-----------YAEAALRAVH---------QAFE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 45.1914% -84 - C4 -2WKB ? A:[15-101] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAQNTLSEIEDAI------------SNILGK---PVAYIMSNYDYQKNLRFSGS-NEGYCFVRLTSI------SNNSLLADKI-----------TKILSNHL-SVKPR--RVYIE-------FRDNFAFSGSLF---GG---------------------------------------------------------
46 HHSearch 44.8516% -74 - C4 -3KAN DOPD_HUMAN A:[15-101] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAGLEKRLCAAA------------ASILGK---PADRVNVTVRPGLAMALSGS-TEPCAQLSISSIGVVGTAEDNRSHSAHF-----------FEFLTKEL-ALGQD--RILIR-------FFPLESWQIGKI---GTVMTFL----------------------------------------------------