@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA3102: (2016-02-13 )
MAAFEYLALDPSGRQQKGVLEADSARQVRQLLRERQLAPLDVKPTRTREQSGQGGRLTFARGLSARDLALVTRQLATLVQAALPIEEALRAAAAQSTSQRIQSMLLAVRAKVLEGHSLAGSLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQRQQSRQKIQLALLYPVILMVASLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVSDWVKAWGALAFVAAIGGVIGFRYALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFASTLAILTRSGVPLVEALAIAAEVIANRIIRNEVVKAAQKVREGASLTRSLEATGQFPPMMLHMIASGERSGELDQMLARTARNQENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLAILLPILSLNQLVG

Atome Classification :

(20 SA) ------------------.........10........20.....-----------...30........-40........50------.........60........---70........80........90........100--........110.......120-----.........130.-......140...-....150.......160.......170-------------........180--------........190.........200-------.--------.......210---........220-----.......-230..----.....240..--.---------....250....---------------------------------...260.....-------------------..270.......280.------------......------290.......300.......-----------310-----......------------.320.......---------330..--------------....---.340.......350.......360.......370.------------......380.......390.......400...--------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------MAAFEYLALDPSGRQQKGVLEADSAR-----------QVRQLLRERQLAP-LDVKPTRTREQ-------SGQGGRLTFARGLSARDLA---LVTRQLATLVQAALPIEEALRAAAAQSTSQRI---QSMLLAVRAKVLEGHSLAG-------SLREFPTAFPELY-RATVAAGEHAGH-LGPVLEQLADYTEQRQQSRQKIQLAL--------------LYPVILMVAS---------LAIVGFLLG--YVVPDVVRVF-I-------D--------SGQTLPLLT----RVLIGVSDWVK-----AWGALAF-VAAIG----GVIGFRYALR--K---------DAFRERWHGFL---------------------------------LRVPLVGRLVR-------------------STDTARFASTLAILTR------------SGVPLV------EALAIAAEVIANRIIRNEVV-----------KAA-----QKVREG------------ASLTRSLEATG---------QFPPM--------------MLHM---IASGERSGELDQMLARTARNQENDLAAQIGLMVGL------------FEPFMLIFMGAVVLVIVLAILLPILSLNQLVG--------------------
21 PsiBlast_CBE 81.9259% -80 - C3 -2VMB GSPF_VIBCH B:[8-116] --------------------------------------------------------------------------------------------------GISTPDLA---LITRQLATLVQSGMPLEECLRAVAEQSEKPRI---RTMLVAVRAKVTEGYTLSD-------SLGDYPHVFDELF-RSMVAAGEKSGH-LDSVLERLADYAENRQKMRSKLQQA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 80.5759% -83 - C3 -2VMB GSPF_VIBCH A:[3-116] ---------------------------------------------------------------------------------------------FAFKRGISTPDLA---LITRQLATLVQSGMPLEECLRAVAEQSEKPRI---RTMLVAVRAKVTEGYTLSD-------SLGDYPHVFDELF-RSMVAAGEKSGH-LDSVLERLADYAENRQKMRSKLQQA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 80.1318% -75 - C2 -1REQ MUTA_PROFR B:[19-474] ----------------TLSLAGDFPKA--TEEQWEREVEKVLNRGRPPEKQLTFAECLKRLTVHTVDG-IDIVPMYRPKDAPKKL---GYPGVAPFTRGTTVRNGD-----MDAWDVRALHEDPDEKFTRKAILEGLERGV---TSLLLRVDP----------DAIA----PEHLDEVLSDVL-LEMTKVEVFSRYDQGAAAEALVSVYERSDKPAKDLALNL--------------GLDPIGFAALQGTEPDLTVLGDWVRRLA--KFSPDSRAVT-I-------DANIYHNAGAGDVAELAW----ALATGAEYVRA-----LVEQGFT-ATEAF----DTINFRVTAT--HDQFLTIARLRALREAWARIG---------------------------------EVFGVD-EDKRGARQNAITSWRELTREDP-YVNILRGSIATFSASV------------GGAESITTLPFTQALGLPEDDFPLRIARNTGI-----------VLA-----EEVNIGRVNDPAGGSYYVESLTRSLADAA---------WKEFQ--------------EVEKLGGMSKAVMTEHVTKVLDACNAERAKRLANRKQPITAVSEFPMIGARSIE----------------------------------------------------
23 HHSearch 80.0259% -80 - C3 -3C1Q GSPF_VIBCH A:[5-117] -----------------------------------------------------------------------------------------------FKRGISTPDLA---LITRQLATLVQSGMPLEECLRAVAEQSEKPRI---RTMLVAVRAKVTEGYTLSD-------SLGDYPHVFDELF-RSMVAAGEKSGH-LDSVLERLADYAENRQKMRSKLQQAS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 79.7758% -85 - C3 -2VMA GSPF_VIBCH A:[3-122] ---------------------------------------------------------------------------------------------FAFKRGISTPDLA---LITRQLATLVQSGMPLEECLRAVAEQSEKPRI---RTMLVAVRAKVTEGYTLSD-------SLGDYPHVFDELF-RSMVAAGEKSGH-LDSVLERLADYAENRQKMRSKLQQASEN------------LYP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 79.3158% -80 - C3 -3C1Q GSPF_VIBCH A:[3-116] ---------------------------------------------------------------------------------------------FAFKRGISTPDLA---LITRQLATLVQSGMPLEECLRAVAEQSEKPRI---RTMLVAVRAKVTEGYTLSD-------SLGDYPHVFDELF-RSMVAAGEKSGH-LDSVLERLADYAENRQKMRSKLQQA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 70.2636% -40 - C3 -3C1Q GSPF_VIBCH A:[10-116] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S-------------------TPDLALITRQLATLVQ------------SGMPLE------ECLRAVAEQSEKPRIRTMLV-----------AVR-----AKVTEG------------YTLSDSLGDYPH--------VFDEL--------------FRSM---VAAGEKSGHLDSVLERLADYAENRQKMRSKLQQA-----------------------------------------------------------------
24 HHSearch 68.8435% -76 * C3 *2WHN - ? A:[59-162] ------------------------------------------------------------------------------------------------ERGPGLKDLA---IFSRQLATMLGAGLTLLQALAILERQTENRKF---REILKQVRTDVEGGMAFSE-------ALSKH-KIFSRLY-VNLVRAGETSGG-LDLILDRLASFLEKELELR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 67.8034% -74 - C3 -2WHN - ? A:[60-162] -------------------------------------------------------------------------------------------------RGPGLKDLA---IFSRQLATMLGAGLTLLQALAILERQTENRKF---REILKQVRTDVEGGMAFSE-------ALSKHKI-FSRLY-VNLVRAGETSGG-LDLILDRLASFLEKELELR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 63.8416% -68 - C2 -4OR2 C562_ECOLX (first) A:[5-372] ------------------DLEDNWETLNDNLKVIE---KADNAA-----------QVKDALTKMRAAA-LDAQKATPPKL-------EDKS-----PDSPEMKDFR---HGFDILVGQIDDALKLANEGKVKEAQAAAEQL---KTTRNAYIQKYLI-------------PVRYLEWSNIESI-IAIAFSCLGILV-TLFVTLIFVLYRDTPVVKSSS------------------------RELCY---------IILAGIFLG--YVCPFTLIA----------K--------PTTTSCYLQ----RLLVGLS-SAM-----CYSALVT-KTNRI----ARILARKPRF--M---------SAWAQVIIASI---------------------------------LISVQLTLVVT-------------------LIIMEPPMPILSYPSI------------KEVYLICNT---SNLGVVAPLGYNGLLIMSCT-----------YYA-----FKTRNV------------P-------------------------------------------------ANFNEAKYIAFTMYTTCIIWLAFVPIYFGSN------------YKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE------------------
22 HHSearch 62.2528% -36 - C3 -2WHN - ? A:[54-162] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIPALERGPG-------------------LKDLAIFSRQLATMLG------------AGLTLL------QALAILERQTENRKFREILK-----------QVR-----TDVEGG------------MAFSEALSKHK---------IFSRL--------------YVNL---VRAGETSGGLDLILDRLASFLEKELELR-----------------------------------------------------------------------
36 Fugue 54.4816% -67 - C2 -4J72 MRAY_AQUAE A:[20-363] ----------------FAFNVLKYI----TFRSFTAVLIAFFLT-----------LV--------LSP-SFINRLKKYTP-------TMGGIVILIVVTLSTLLLM---RWDIKYTWVVLLSFLSFGTIGFWDDYVKLKNK---KGISIKTKFLLQVLSASLI-------SVLIYYWADIDTI-LYFPFFKELYVD-LGVLYLPFAVFVIVGSANAVNLTDGLDGLA----------IGPAMTTATA---------LGVVAYAVGHSKIAQYLNIPY-V-------P--------YAGELTVFC----FALVGAGLGFL-----WFNSFPA-QMFMG------------------------------------------------------------------------------DVG-------------------SLSIGASLATVALLTK------------S----E------FIFAVAAGVFVFETISVILQ-----------IIY-----FRWTGG------------KRLFKR----------------APF--------------HHHL---ELNG------------------------------------------------LPEPKIVVRMWIISILLAIIAISMLK---------------------
39 Fugue 54.2914% -72 - C2 -3ODU CXCR4_HUMAN (first) A:[37-502] PCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLR-----------SMTDKYRL-HLSV-ADLLFVITLPF-------WAVDAVANWYFGNFLCKAV---HVIYTVNLYSSVWILAFISLDRYLAIVHATNS---QRPRKLLAEKVVYVGVWIP-------ALL---LTIPDFI-FANVSEADDR----YICDRFYPNDLWVVVFQFQHIMVGL--------------ILPGIVILSC---------YCIIISKLS--HSGSNIFEMLRI-------D--------EGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSEL-DKAIGRNTNGVITKDEAEKLFN---------QDVDAAVRGIL---------------------------------RNAKL-KPVYD-------------------SLDAVRRAALINMVFQ------------MGETGV------AGFTNSLRMLQQKRWDEAAV-----------NLAKSRWYNQTPNR------------AKRVITTFRTG---------TWDAYGSK-----------GHQK---RKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEF-----ENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ
37 Fugue 53.5013% -83 - C2 -7REQ MUTB_PROFR A:[3-559] ------------------LPRFDSVDLGNAPVPADAARRFEELA-----------AKAGTGEAWETAEQIPVGTLFNEDVYKDMDWLDTYAGIPPFVHGPYATMYAFRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLPTHRGYDSDNPRVAGDVGMAGVAIDSIYDMRELFAGIPLDQMSVSMTMNGA-VLPILALYVVTAEEQGVKPEQLAGTIQNDILKEFMVRNTYIYPPQPSMRI---------ISEIFAYTS--ANMPKWNSIS-ISGYHMQEA--------GATADIEMA----YTLADGVDYIR-----AGESVGLNVDQFA----PRLSFFWGIG--MNFFMEVAKLRAARMLWAKLVHQFGPKNPKSMSLRTHSQTSGWSLTAQDVYNNVVRTCIEAMAATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLFLQQESGTTRVIDPWSGSAYV------EELTWDLARKAWGHIQEVEKVGGMAKAIEKGIPK-----MRIEEA------------AARTQARIDSG---------RQPLIGVNKYRLEHEPPLDVLKV---DNSTVLAEQKAKLVKLRAERDPEKVKAALDKITWA------------AGNPDDKDPDRNLLKLCIDAGRAMATVGEMSDALEKVFGRYT----------
14 PsiBlast_PDB 45.6524% 22 - C3 -3VJA - FDFT_HUMAN A:[257-342] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNF------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQ------------------------------------------------------------------------------
13 PsiBlast_PDB 45.2424% 32 - C3 -3VJ9 FDFT_HUMAN A:[257-342] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNF------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQ------------------------------------------------------------------------------
7 PsiBlast_PDB 44.3824% 26 - C3 -3ASX FDFT_HUMAN A:[254-340] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNF------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQN-----------------------------------------------------------------------------
18 PsiBlast_PDB 44.1924% 31 - C3 -3WEG FDFT_HUMAN A:[257-342] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNF------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQ------------------------------------------------------------------------------
10 PsiBlast_PDB 44.0924% 29 - C3 -3V66 FDFT_HUMAN A:[254-340] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNF------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQN-----------------------------------------------------------------------------
5 PsiBlast_PDB 43.8824% 26 - C3 -3WEJ FDFT_HUMAN A:[257-342] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVFNA------------CAIPQV------MAIATLAACYNNQ----QVF-----------KGA-----VKIRKG------------QAVTLMMDATNMPAVKAIIYQYMEE--------------IYHR---IPDSDPSSSKTRQIISTIRTQ------------------------------------------------------------------------------