@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00069_CDK4_H: (2014-08-15 )
MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE

Atome Classification :

(17 SA) .........10........20....-....30........40........50........60........70........80..-......90........100.....--..110.......120.......130.......140.......150........160.......-----170.......180.......-190........200.......-----------210......-------.220.......230.......240-...----.----...250-.-.....-.260........270.......280.......290.......300.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT-DREIKVTLVFEHVDQDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG-GTVKLADFGLARIYSYQM-----ALTPVVVTLWYRAPEVLLQS-T-YATPVDMWSVGCIFAEMFR-----------RKPLFCGNS-------EADQLGKIFDLIGLPPEDDWPRDV-SLP----R----GAFPPR-G-PRPVQ-SVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
7 PsiBlast_PDB 86.9669%-131 - C1 -1XO2 CDK6_HUMAN B:[11-305] ---QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS----RETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWPRDV-ALP----R----QAFH-----AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER---
8 PsiBlast_PDB 86.7169%-132 - C1 -2EUF CDK6_HUMAN B:[10-305] --DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT-DRETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWP-------------------------AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER---
9 PsiBlast_PDB 85.0469%-133 - C1 -2F2C CDK6_HUMAN B:[9-305] -ADQQYEC-AEIG----GKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS-T-DRETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWP----------------QAF------AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER---
16 PsiBlast_PDB 84.3670%-138 - C1 -4EZ5 CDK6_HUMAN A:[11-301] ---QQYECVAEIGEGA-GKVFKARDLKNGGRFVALKRV------------PLSTIREVAVLRHLETFEHPNVVRLFDVC---------TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLA------------------VTLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWPRDV-ALP----R----QAFHS----AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ-------
14 PsiBlast_PDB 83.8970%-133 - C1 -3NUX CDK6_HUMAN A:[10-301] --DQQYECVAEIGEGA-GKVFKARDLKNGGRFVALKRVR-----------PLSTIREVAVLRHLETFEHPNVVRLFDVC---------TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLA------------------VTLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWPRDV-ALP----R----QAFH-K-S-AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ-------
15 PsiBlast_PDB 82.3470%-135 - C1 -4AUA CDK6_HUMAN A:[11-301] ---QQYECVAEIGEGA-GKVFKARDLKNGGRFVALKR---------------STIREVAVLRHLETFEHPNVVRLFDVC---------TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-GQIKLADFGLA-------------------TLWYRAPEVLLQS-S-YATPVDLWSVGCIFAEMFR-----------RKPLFRGSS-------DVDQLGKILDVIGLPGEEDWPRDV-ALP----R----QAFHSK-S-AQPIE-KFV-TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ-------
20 PsiBlast_PDB 81.3145%-126 - C1 -2IW8 CDK2_HUMAN A:[4-291] -SMENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLDTETEG---VPSTAIREISLLKELN---HPNIVKLLDVIHT------ENKLYLVFEHVDQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAFGVPVR----TYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------EIDQLFRIFRTLGTPDEVVWPGVT-SMPDY--K----PSFPKW-A-RQDFS-KVV-PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ-------
17 PsiBlast_PDB 77.1246%-132 - C1 -1GII CDK2_HUMAN A:[4-287] -----FQKVEKIGEGTYGVVYKARN-KLTGEVVALKKI-----------VPSTAIREISLLKELN---HPNIVKLLDVIHT------ENKLYLVFEHVHQDLKTFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLARAF---------------VTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------EIDQLFRIFRTLGTPDEVVWPGVT-SMPDY--K----PSFPKW-A-RQDFS-KVV-PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ-------
18 PsiBlast_PDB 75.1146%-128 - C1 -1GIJ CDK2_HUMAN A:[4-287] -----FQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIR--------------AIREISLLKELN---HPNIVKLLDVIHT------ENKLYLVFEHVHQDLKTFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-GAIKLADFGLA------------------VTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------EIDQLFRIFRTLGTPDEVVWPGVT-SMPDY--K----PSFPKW-A-RQDFS-KVV-PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ-------
48 HHSearch 73.7046%-120 - C1 -4AU8 CDK5_HUMAN A:[4-293] -GSQKYEKLEKIGEGTYGTVFKAKN-RETHEIVALKR------------VPSSALREICLLKELK---HKNIVRLHDVLH---------KLTLVFEFCDQDLKKYFDSC--NG-DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN-GELKLADFGLARAFGIPV-----R-SAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANA----------GRPLFPGND-------VDDQLKRIFRLLGTPTEEQWPSMT-KLP----DY---KPYPMY-PATTSLV-NVV-PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF-----
33 HHSearch 70.7939%-101 - C1 -3N9X ? A:[26-369] ---DNYIIKHLIGRGSYGYVYLAYD-KNTEKNVAIKKVNRMFEDLI---DCKRILREITILNRLK---SDYIIRLYDLIIPDDL-LKFDELYIVLEIADSDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD-CSVKVCDFGLARTI-------------HVVTRWYRAPELILLQEN-YTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNIIFNIIGTPTEDDLKNIN-KPEVIKYI----KLFPHR-K-PINLK-QKY-PSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR----
50 HHSearch 70.0736%-108 - C1 -3QYZ MK01_RAT A:[27-320] ---PRYTNLSYIGEGAYGMVCSAYD-NLNKVRVAIKKISPF-EHQ---TYCQRTLREIKILLRFR---HENIIGINDIIRAPTI-EQMKDVYIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTG-FLTEYVATRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLS-----------NRPIFPGKH-------YLDQLNHILGILGSPSQEDLNCII-NLK----ARNYLLSLPHK-N-KVPWN-RLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY-----
51 HHSearch 69.1130%-121 - C1 -1J1B GSK3B_HUMAN A:[55-343] ----SYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDK--RF-------KNRELQIMRKLD---HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATD-YTSSIDVWSAGCVLAELLL-----------GQPIFPGDS-------GVDQLVEIIKVLGTPTREQIREMNPNYT----E----FKFPQI-K-AHPWT-KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL-----
52 HHSearch 66.9435%-109 - C1 -4BGQ CDKL5_HUMAN A:[11-301] --MNKFEILGVVGEGAYGVVLKCRH-KETHEIVAIKKFK----------VKETTLRELKMLRTLK---QENIVELKEAFRRR------GKLYLVFEYVEKNMLELLEEM--PN-GVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN-DVLKLCDFGFARNLSE--------------TRWYRSPELLLGA-P-YGKSVDMWSVGCILGELSD-----------GQPLFPGES-------EIDQLFTIQKVLGPLPSEQMKLFY-SNP----RFHG-LRFPAVNH-PQSLERRYL-GILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQ-----
39 HHSearch 64.5235%-110 * C1 *4IC7 MK07_HUMAN A:[55-352] ---DEYEIIETIGNGAYGVVSSARR-RLTGQQVAIKKIPNAFDVVT---NAKRTLRELKILKHFK---HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE-YTQAIDLWSVGCIFGEMLA-----------RRQLFPGKN-------YVHQLQLIMMVLGTPSPAVIQAVG-AERVRAYI----QSLPPR-Q-PVPWE-TVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY-----
34 HHSearch 62.6738%-108 - C1 -1UA2 CDK7_HUMAN A:[13-299] ------EKLDFLGEGQFATVYKARD-KNTNQIVAIKKI------------NRTALREIKLLQELS---HPNIIGLLDAFGHK------SNISLVFDFMETDLEVIIKDN--S-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNR----AYTHQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------DLDQLTRIFETLGTPTEEQWPDMC-SLPD---Y----VTFKSF-P-GIPLH-HIF-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP----
46 HHSearch 61.4636%-114 - C1 -2FST MK14_HUMAN X:[29-318] ---ERYQNLSPVG----GSVCAAFD-TKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMK---HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED-CELKILD----------------------ATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLT-----------GRTLFPGTD-------HIDQLKLILRLVGTPGAELLKKIS-SESARNYI----QSLTQM-P-KMNFA-NVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY-----