@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00069_CDK5_H: (2014-08-15 )
MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP

Atome Classification :

(19 SA) .........10........20....--....30........40........50........60........70-.-----..-----.------.....80........90.-..----.-....100.......110.......120.......130..----.....140.......150.......160.......170.......180.......190.....----------..200.....-------.----.210.......220.......230.--.---..-..----.240.........250----........260.......270.......280.......290
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MQKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL--H-----SD-----K------KLTLVFEFCDQDLKKYFD-SC----N-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN----------AGRPLFPGND-------V----DDQLKRIFRLLGTPTEEQWPSMTKL--P---DY-KP----YP--MYPATTSLVN-V----VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP
23 PsiBlast_CBE 93.69100%-116 - C1 -4AU8 CDK5_HUMAN B:[6-293] -QKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRL----EGVPSSALREICLLKELKHKNIVRLHDVL--H-----S------K------KLTLVFEFCDQDLKKYFD-SC----N-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPV------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN----------AGRPLFPGND-------V----DDQLKRIFRLLGTPTEEQWPSMTKL--P---DY-KP----YP--MYPATTSLVN-V----VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF---
34 HHSearch 92.81100%-113 - C1 -4AU8 CDK5_HUMAN A:[6-293] -QKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRV---------PSSALREICLLKELKHKNIVRLHDVL--H-------------------KLTLVFEFCDQDLKKYFD-SC----N-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVR--SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN----------AGRPLFPGND-------V----DDQLKRIFRLLGTPTEEQWPSMTKL--P---DY-KP----YP--MYPATTSLVN-V----VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF---
21 PsiBlast_CBE 90.7899%-125 - C1 -3O0G CDK5_HUMAN B:[6-288] -----KLEKIG-----TVFKA--------EIVALKRVR--------PSSALREICLLKELKHKNIVRLHDVL--H-----SD-----K------KLTLVFEFCDQDLKKYFD-SC----N-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN----------AGRPLFPGND-------V----DDQLKRIFRLLGTPTEEQWPSMTKL--P---DY-KP----YP--MYPATTSLVN-V----VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD----
20 PsiBlast_PDB 83.3459%-114 - C1 -3QQF CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIR----TEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
19 PsiBlast_PDB 82.4159%-109 - C1 -3QL8 CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIR----TEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
15 PsiBlast_PDB 82.2059%-107 - C1 -3PXY CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIR----TEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
17 PsiBlast_PDB 81.8159%-106 - C1 -3PY0 CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIR----TEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
12 PsiBlast_PDB 81.8159%-109 - C1 -3PXF CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
16 PsiBlast_PDB 81.4259%-111 - C1 -3PXZ CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
44 HHSearch 80.9159%-109 - C1 -3NIZ ? A:[20-309] MEKYQKLEKVGEGTYGVVYKAKD-S--QGRIVALKRIR------GIPSTAIREISLLKELHHPNIVSLIDVI--H-----SE-----R------CLTLVFEFMEKDLKKVLD-EN----K-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALKLADFGLARAFGIPVR---HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-----------GKPLFPGVT-------D----DDQLPKIFSILGTPNPREWPQVQEL--P---LW-KQRT--FQ--VFE-KKPWSS-I----IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP-
13 PsiBlast_PDB 80.7259%-104 - C1 -3PXQ CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIR----TEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
18 PsiBlast_PDB 80.0559%-103 - C1 -3PY1 CDK2_HUMAN A:[9-300] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMDASA----L-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT----------R-RALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KP----SF--PKWARQDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP
57 HHSearch 72.0539%-107 - C1 -2B9H FUS3_YEAST A:[11-314] -SDFQLKSLLGEGAYGVVCSATHKP--TGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQ--RPDSFENF-----N------EVYIIQELMQTDLHRVIS-T-------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----NSNCDLKVCDFGLARIID------VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-----------RRPIFPGRD-------Y----RHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKS----LP--MYPA-APLEK-M----FPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD-
41 HHSearch 71.9541%-100 - C1 -3N9X ? A:[26-370] -DNYIIKHLIGRGSYGYVYLAYDKN--TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLI--I-----PDDLLKFD------ELYIVLEIADSDLKKLFK-T-----P-IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL----NQDCSVKVCDFGLARTI---------HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPHEKSN----RDQLNIIFNIIGTPTEDDLKNINKP--EVI-KYIKL----FP--HRK-PINLKQ-K----YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK-
36 HHSearch 69.8046% -97 - C1 -1UA2 CDK7_HUMAN A:[13-299] ----EKLDFLGEGQFATVYKARDKN--TNQIVAIKKI---------NRTALREIKLLQELSHPNIIGLLDAF--G-----HK-----S------NISLVFDFMETDLEVIIK-DN----S-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMCSL--P---DY-VT----FK--SFPG-IPLHH-I----FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP--
50 HHSearch 67.5441%-105 - C1 -4BGQ CDKL5_HUMAN A:[11-301] MNKFEILGVVGEGAYGVVLKCRHKE--THEIVAIKKFK-------VKETTLRELKMLRTLKQENIVELKEAF--R-----RR-----G------KLYLVFEYVEKNMLELLE-EM----P-NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLI----SHNDVLKLCDFGFARNLSE----------TRWYRSPELLLG-APYGKSVDMWSVGCILGELSD-----------GQPLFPGES-------E----IDQLFTIQKVLGPLPSEQMKLFYSN--P---RF-HGLR--FP--AVNHPQSLERRY----LGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQ---
53 HHSearch 67.3242%-112 - C1 -4F6U CDK8_HUMAN A:[27-341] -------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIE----GTGISMSACREIALLRELKHPNVISLQKVFLSH-----AD-----R------KVWLLFDYAEHDLWHIIK-FHRASK--VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ-------ENPYHHDQLDRIFNVMGFPADKDWEDIKKM--P---EH-STLMKDFRRNTYT-NCSLIK-YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP--
52 HHSearch 62.1237%-104 - C1 -2FST MK14_HUMAN X:[29-320] -ERYQNLSPVG----GSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF--T-----PA-----RSLEEFNDVYLVTHLMGADLN-------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILD------------------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-----------GRTLFPGTD-------H----IDQLKLILRLVGTPGAELLKKISSESAR---NYIQS----LT--QMP-KMNFAN-V----FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD-
37 HHSearch 36.2460% 20 - C1 -4EK4 CDK2_HUMAN A:[4-293] MENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKI---------PSTAIREISLLKELNHPNIVKLLDVI--H-----TE-----N------KLYLVFEFLHQDLKKFMD-AS----ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVTSM--P---DY-KPS---FP--KWAR-QDFSK-V----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP