@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00069_CDK7_H: (2014-08-15 )
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF

Atome Classification :

(17 SA) .........10........20........30.--.......40........50....-....60........70........80----.------.------..------.....90........100..-----.....110........120.......130.......140...----...-.150.......160....----...170.......180.......190.......200......-----------.210.....-------.----.220.......230.......240-.---.....--.--.-250----....-....260---.-.......270.......280.......290.......300.......310.......320.......330.......340....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MALDVKSRAKRYEKLDFLGEGQFATVYKARDK--NTNQIVAIKKIKLGHRSEAKDGI-NRTALREIKLLQELSHPNIIGLLDA-----F------G------HK------SNISLVFDFMETDLEVIIKD-----NSLVLTP-SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DEN-GVLKLADFGLAKSFGSPN----RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMC--S---LPDYV--T--F-KS-----FPGI-PLHHIF----S-AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
34 HHSearch 90.52100%-124 - C1 -1UA2 CDK7_HUMAN A:[13-311] ------------EKLDFLGEGQFATVYKARDK--NTNQIVAIKKI-------------NRTALREIKLLQELSHPNIIGLLDA-----F------G------HK------SNISLVFDFMETDLEVIIKD-----NSLVLTP-SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DEN-GVLKLADFGLAKSFGSPN----RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMC--S---LPDYV--T--F-KS-----FPGI-PLHHIF----S-AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPN-----------------------------------
18 PsiBlast_PDB 76.1244%-111 - C1 -3PXY CDK2_HUMAN A:[9-306] --------MENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIR----TE---GV-PSTAIREISLLKELNHPNIVKLLDV-----I------H------TE------NKLYLVFEFLHQDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTE-GAIKLADFGLARAFGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVT--S---MPDYKP-S--F-PK-----WARQ-DFSKVV----P-PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL---------------------------------------
22 PsiBlast_CBE 75.9099% -90 - C1 -1UA2 CDK7_HUMAN C:[13-311] ------------EKLDFLGEGQFATVYKARDK--NTNQIVAIKKI-------------NRTALREIKLLQELSHPNIIGLLDA-----F------G------HK------SNISLVFDFMETDLEVIIKD-----NSLVLTP-SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DEN-GVLKLADFGLAKSFGSPN----RAY-HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMC--S---LPDYV--T--F-KS-----FPGI-PLHHIF----S-AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPN-----------------------------------
15 PsiBlast_PDB 73.6644%-110 - C1 -3PXF CDK2_HUMAN A:[9-306] --------MENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETE---GV-PSTAIREISLLKELNHPNIVKLLDV-----I------H------TE------NKLYLVFEFLHQDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTE-GAIKLADFGLARAFGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVT--S---MPDYKP-S--F-PK-----WARQ-DFSKVV----P-PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL---------------------------------------
21 PsiBlast_CBE 73.4099% -87 - C1 -1UA2 CDK7_HUMAN D:[13-311] ------------EKLDFLGEGQFATVYKARDK--NTNQIVAIKKI-------------NRTALREIKLLQELSHPNIIGLLDA-----F------G------HK------SNISLVFDFMETDLEVIIKD-----NSLVLTP-SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DEN-GVLKLADFGLAKSFGSPN----RAY-HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMC--S---LPDYV--T--F-KS-----FPGI-PLHHIF----S-AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPN-----------------------------------
19 PsiBlast_PDB 73.1644%-109 - C1 -3PXZ CDK2_HUMAN A:[9-306] --------MENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETE---GV-PSTAIREISLLKELNHPNIVKLLDV-----I------H------TE------NKLYLVFEFLHQDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTE-GAIKLADFGLARAFGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVT--S---MPDYKP-S--F-PK-----WARQ-DFSKVV----P-PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL---------------------------------------
16 PsiBlast_PDB 72.8144%-109 - C1 -3PXQ CDK2_HUMAN A:[9-306] --------MENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIR----TE---GV-PSTAIREISLLKELNHPNIVKLLDV-----I------H------TE------NKLYLVFEFLHQDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTE-GAIKLADFGLARAFGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVT--S---MPDYKP-S--F-PK-----WARQ-DFSKVV----P-PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL---------------------------------------
20 PsiBlast_PDB 72.6844%-106 - C1 -3PY0 CDK2_HUMAN A:[9-306] --------MENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIR----TE---GV-PSTAIREISLLKELNHPNIVKLLDV-----I------H------TE------NKLYLVFEFLHQDLKKFMDA-----SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTE-GAIKLADFGLARAFGVPV----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS-------E----IDQLFRIFRTLGTPDEVVWPGVT--S---MPDYKP-S--F-PK-----WARQ-DFSKVV----P-PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL---------------------------------------
23 PsiBlast_CBE 71.2799% -83 - C1 -1UA2 CDK7_HUMAN B:[13-311] ------------EKLDFLGEGQFATVYKARDK--NTNQIVAIKKI-------------NRTALREIKLLQELSHPNIIGLLDA-----F------G------HK------SNISLVFDFMETDLEVIIKD-----NSLVLTP-SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DEN-GVLKLADFGLAKSFGSPN----RAY-HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-----------RVPFLPGDS-------D----LDQLTRIFETLGTPTEEQWPDMC--S---LPDYV--T--F-KS-----FPGI-PLHHIF----S-AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPN-----------------------------------
53 HHSearch 69.3436%-127 - C1 -2B9H FUS3_YEAST A:[10-317] --------SSDFQLKSLLGEGAYGVVCSATHK--PTGEIVAIKKIEPFDKP----LF-ALRTLREIKILKHFKHENIITIFNIQRPDSF------E------NF------NEVYIIQELMQTDLHRVIST-----Q--MLSD-DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----NSN-CDLKVCDFGLARIID----------VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-----------RRPIFPGRD-------Y----RHQLLLIFGIIGTPHSDNDLRCI--ESPRAREYIK-S--L-PM-----YPAA-PLEKMF----P-RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPND-------------------------------------------
55 HHSearch 68.5446%-118 * C1 *3NIZ ? A:[19-308] -------LMEKYQKLEKVGEGTYGVVYKAKD---SQGRIVALKRIR---------GI-PSTAIREISLLKELHHPNIVSLIDV-----I------H------SE------RCLTLVFEFMEKDLKKVLDE-----NKTGLQD-SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI----NSD-GALKLADFGLARAFGIPV----R---HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-----------GKPLFPGVT-------D----DDQLPKIFSILGTPNPREWPQVQ--E---LPLWKQRT--F-QV-----FEKK-PWSSII----P-GFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD-----------------------------------------------
40 HHSearch 68.1546%-123 - C1 -4AU8 CDK5_HUMAN A:[5-293] --------SQKYEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRV-------------PSSALREICLLKELKHKNIVRLHDV-----L------H---------------KLTLVFEFCDQDLKKYFDS-----CNGDLDP-EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRN-GELKLADFGLARAFGIPV----R--SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA----------GRPLFPGND-------V----DDQLKRIFRLLGTPTEEQWPSMT--K---LPDYK--P--Y-PM-----YPATTSLVNVV----P-KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF------------------------------------------------
35 HHSearch 67.9438%-117 - C1 -3N9X ? A:[25-373] --------PDNYIIKHLIGRGSYGYVYLAYDK--NTEKNVAIKKVNRMFE----DLIDCKRILREITILNRLKSDYIIRLYDL-----I------I------PDDLLKF-DELYIVLEIADSDLKKLFKT-----P-IFLTE-EHIKTILYNLLLGENFIHESGIIHRDLKPANCLL----NQD-CSVKVCDFGLARTI-------------HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPHEKSN----RDQLNIIFNIIGTPTEDDLKNIN--KPE-VIKYIK-L--F-PH-----RKPI-NLKQKY----P-SISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL-------------------------------------------
39 HHSearch 67.7236%-120 - C1 -4IC7 MK07_HUMAN A:[55-357] ---------DEYEIIETIGNGAYGVVSSARRR--LTGQQVAIKKIPNAFDVV---TN-AKRTLRELKILKHFKHDNIIAIKDI-----LRPTVPYG------EF------KSVYVVLDLMESDLHQIIHS-----S-QPLTL-EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA-----------RRQLFPGKN-------Y----VHQLQLIMMVLGTPSPAVIQAVGAER---VRAYIQ-S--L-PP-----RQPV-PWETVY----P-GADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDD-------------------------------------------
45 HHSearch 67.6641%-130 - C1 -4F6U CDK8_HUMAN A:[27-346] ---------------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG-------TGI-SMSACREIALLRELKHPNVISLQKV-----F------LSH----AD------RKVWLLFDYAEHDLWHIIKFHRASK--VQLPR-GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER-GRVKIADMGF------------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ-------ENPYHHDQLDRIFNVMGFPADKDWEDIK--K---MPEHS--T--LMKDFRRNTYTNC-SLIKYMEKHKV-KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSD------------------------------------------
52 HHSearch 62.8637%-129 - C1 -1J1B GSK3B_HUMAN A:[55-346] ----------SYTDTKVIGNGSFGVVYQAKLC--DSGELVAIKKVLQDKR----------FKNRELQIMRKLDHCNIVRLRYF-----F------YSSGEKKDE------VYLNLVLDYVPETVYRVARHYSR--AKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-----------GQPIFPGDS-------G----VDQLVEIIKVLGTPTREQIREMN-------PNYT--EFKF-PQ-----IKAH-PWTKVF----RPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP---------------------------------------------
49 HHSearch 60.7037%-127 - C1 -2FST MK14_HUMAN X:[28-323] --------PERYQNLSPVG----GSVCAAFDT--KTGLRVAVKKLSRPFQSI---IH-AKRTYRELRLLKHMKHENVIGLLDV-----F------T------PARSLEEFNDVYLVTHLMGADLN----------Q--KLTD-DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NED-CELKILD----------------------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-----------GRTLFPGTD-------H----IDQLKLILRLVGTPGAELLKKIS--SES-ARNYIQ-S--L-TQ-----MPKM-NFANVF----I-GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD-------------------------------------------