@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PF00069_CDK8_H: (2014-08-15 )
MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY
Atome Classification :
(22 SA)
.........10........20........30........40........50...----....---.60---.........70........80........----90--.........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......-----------230......---.240....-...250.......260.......270.......280....--...290........300..--.....310.......320.......330...--....340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460..
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MDY
D
F
K
V
K
LSS
E
R
E
R
V
E
D
L
F
E
YEGCKVGRGTYG
H
V
Y
K
AKRKDGKD
D
K
D
Y
A
L
K
QI----EGTG---I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
LKHP
N
V
I
S
L
Q
K
V
F
L
SHA----D---
R
K
V
W
L
L
F
DYAE
H
D
L
W
H
I
I
K
F
H
RASKANKKPVQL
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
HA
N
W
V
L
HRDLKPA
N
I
L
V
MGEGPERG
R
V
K
I
A
D
M
G
F
A
R
L
FNSPLKPLADLD
P
V
V
V
T
F
W
YR
A
P
E
L
L
L
GARH
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
LT-----------SEP
I
F
H
C
R
Q---EDIKTSNP-Y
H
H
D
Q
L
D
R
I
F
N
V
MGFPADK
D
W
E
D
I
K
KMP
E
H
S
T
L
M
K
D
F
R
RN--TYTN-
C
S
L
I
K
Y
M
E
K
HKVKP--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
AMQDPYF--LEDPLPT
S
D
VFAGCQIPY
P
K
R
E
FLTEEEPDDKGDKK
N
Q
Q
Q
QQGNNHTNGTGHPGNQDSSHTQGPPL
K
K
V
R
V
VPPTTTSG
G
L
I
M
TSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY
2
PsiBlast_PDB
97.54
100%
-126
- C1 -
4F6S
6
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
--------
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
A
-----------------
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
----------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
97.53
100%
-127
- C1 -
4F7N
2
CDK8_HUMAN
A:
[3-363]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
------
V
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
-----------------
V
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---
E
-----
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
T
E
-------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
97.39
100%
-122
- C1 -
4F6W
10
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
K
-----
V
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
A
------------------
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
96.92
100%
-124
- C1 -
4F7S
8
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
K
------
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
A
R
L
F
N
S
P
L
K
P
---------
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
--------
T
S
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
96.90
100%
-123
- C1 -
4F6U
10
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
K
-----
V
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
-----------------
V
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---
E
-----
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
96.83
100%
-128
- C1 -
4F70
1
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
K
A
------
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
--------------------
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
----------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
95.27
100%
-126
- C1 -
4F7J
3
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
---------
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
------------------
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
94.83
100%
-124
- C1 -
4F7L
1
CDK8_HUMAN
A:
[3-361]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
R
G
T
Y
G
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
-------
Q
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
--------------------
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
P
K
R
E
F
L
---------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
93.63
100%
-132
- C1 -
3RGF
6
CDK8_HUMAN
A:
[3-355]
M
D
Y
D
F
K
V
K
L
S
S
E
R
E
R
V
E
D
L
F
E
Y
E
G
C
K
V
G
-----
H
V
Y
K
A
K
R
K
D
G
K
D
D
K
D
Y
A
L
K
Q
I
----
E
G
T
G
---
I
S
----
M
S
A
C
R
E
I
A
L
L
R
E
L
K
H
P
N
V
I
S
L
Q
K
V
F
L
S
H
A
----
D
---
R
K
V
W
L
L
F
D
Y
A
E
H
D
L
W
H
I
I
K
F
H
R
A
S
K
-------
L
P
R
G
M
V
K
S
L
L
Y
Q
I
L
D
G
I
H
Y
L
H
A
N
W
V
L
H
R
D
L
K
P
A
N
I
L
V
M
G
E
G
P
E
R
G
R
V
K
I
A
D
M
G
F
A
R
----------------
V
T
F
W
Y
R
A
P
E
L
L
L
G
A
R
H
Y
T
K
A
I
D
I
W
A
I
G
C
I
F
A
E
L
L
T
-----------
S
E
P
I
F
H
C
R
Q
---------
N
P
-
Y
H
H
D
Q
L
D
R
I
F
N
V
M
G
F
P
A
D
K
D
W
E
D
I
K
K
M
P
E
H
S
T
L
M
K
D
F
R
R
N
--
T
Y
T
N
-
C
S
L
I
K
Y
M
E
K
H
K
V
K
P
--
D
S
K
A
F
H
L
L
Q
K
L
L
T
M
D
P
I
K
R
I
T
S
E
Q
A
M
Q
D
P
Y
F
--
L
E
D
P
L
P
T
S
D
V
F
A
G
C
Q
I
P
Y
---------------------------------------------------------------------------------------------------------------
33
HHSearch
61.06
35%
-114
- C1 -
3N9X
2
?
A:
[31-384]
-----------------------
K
H
L
I
G
R
G
S
Y
G
Y
V
Y
L
A
Y
D
K
N
--
T
E
K
N
V
A
I
K
K
V
----
N
R
M
F
---
E
D
L
I
D
C
K
R
I
L
R
E
I
T
I
L
N
R
L
K
S
D
Y
I
I
R
L
Y
D
L
I
I
P
D
D
----
L
LKF
D
E
L
Y
I
V
L
E
I
A
D
S
D
L
K
K
L
F
K
---------
T
P
I
F
L
T
E
E
H
I
K
T
I
L
Y
N
L
L
L
G
E
N
F
I
H
E
S
G
I
I
H
R
D
L
K
P
A
N
C
L
L
N
Q
----
D
C
S
V
K
V
C
D
F
G
L
A
R
T
I
------------
H
V
V
T
R
W
Y
R
A
P
E
L
I
L
L
Q
E
N
Y
T
K
S
I
D
I
W
S
T
G
C
I
F
A
E
L
L
N
MLQSHINDPTN
R
F
P
L
F
P
G
S
S
CFP------
H
E
K
S
N
R
D
Q
L
N
I
I
F
N
I
I
G
T
P
T
E
D
D
L
K
N
I
N
K
P
-
E
V
I
K
Y
I
K
L
F
P
----
H
R
K
P
-
I
N
L
K
Q
K
Y
P
----
S
I
--
S
D
D
G
I
N
L
L
E
S
M
L
K
F
N
P
N
K
R
I
T
I
D
Q
A
L
D
H
P
Y
L
--
K
D
V
R
K
K
K
L
E
---
T
K
K
I
I
L
P
--------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
59.88
38%
-107
- C1 -
3QQF
2
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
59.51
38%
-103
- C1 -
3PXF
7
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R
L
D
T
E
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
59.01
38%
-104
- C1 -
3QQG
2
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
58.91
38%
-102
- C1 -
3PXY
1
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
58.72
38%
-105
- C1 -
3PY0
2
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
58.65
38%
-104
- C1 -
3PXZ
3
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R
L
D
T
E
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
58.36
38%
-105
- C1 -
3QL8
2
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
56.89
38%
-99
- C1 -
3PXQ
4
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R----
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
56.40
38%
-96
- C1 -
3PY1
4
CDK2_HUMAN
A:
[17-302]
-------------------------
K
I
G
E
G
T
Y
G
V
V
Y
K
A
R
N
K
--
L
T
G
E
V
V
A
L
K
K
I
R
L
D
T
E
T
E
G
---
V
P
----
S
T
A
I
R
E
I
S
L
L
K
E
L
N
H
P
N
I
V
K
L
L
D
V
I
--
H
T
----
E
---
N
K
L
Y
L
V
F
E
F
L
H
Q
D
L
---
K
K
F
M
D
A
S
A
L
T
G
I
P
L
P
L
----
I
K
S
Y
L
F
Q
L
L
Q
G
L
A
F
C
H
S
H
R
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
T
E
G
A
----
I
K
L
A
D
F
G
L
A
R
A
F
G
V
P
V
R
T
Y
T
H
---
E
V
V
T
L
W
Y
R
A
P
E
I
L
L
G
C
K
Y
Y
S
T
A
V
D
I
W
S
L
G
C
I
F
A
E
M
V
T
-----------
R
R
A
L
F
P
G
D
S
---
E
I
----------
D
Q
L
F
R
I
F
R
T
L
G
T
P
D
E
V
V
W
P
G
V
T
S
M
P
D
Y
K
P
S
F
P
K
W
A
R
Q
--
D
F
S
------------
K
V
V
P
PL
D
E
D
G
R
S
L
L
S
Q
M
L
H
Y
D
P
N
K
R
I
S
A
K
A
A
L
A
H
P
F
F
QD
V
T
K
P
V
P
---------------------------------------------------------------------------------------------------------------------------
49
HHSearch
53.16
41%
-113
- C1 -
4AU8
2
CDK5_HUMAN
A:
[11-293]
-----------------------
L
E
K
I
G
E
G
T
Y
G
T
V
F
K
A
K
N
R
E
--
T
H
E
I
V
A
L
K
R
V
------------
P
----
S
S
A
L
R
E
I
C
L
L
K
E
L
K
H
K
N
I
V
R
L
H
D
V
L
H
------------
K
L
T
L
V
F
E
F
C
D
Q
D
L
K
K
Y
F
D
S
C
-----
N
---
G
D
L
D
P
E
I
V
K
S
F
L
F
Q
L
L
K
G
L
G
F
C
H
S
R
N
V
L
H
R
D
L
K
P
Q
N
L
L
I
N
R
----
N
G
E
L
K
L
A
D
F
G
L
A
R
A
F
G
I
P
V
R
-----
S
A
E
V
V
T
L
W
Y
R
P
P
D
V
L
F
G
A
K
L
Y
S
T
S
I
D
M
W
S
A
G
C
I
F
A
E
L
A
N
A
----------
G
R
P
L
F
P
G
N
D
---
V
----------
D
D
Q
L
K
R
I
F
R
L
L
G
T
P
T
E
E
Q
W
P
S
M
T
K
L
P
D
Y
K
P
Y
P
--------
M
Y
P
A
T
T
S
L
V
----
N
V
V
P
K
L
--
N
A
T
G
R
D
L
L
Q
N
L
L
K
C
N
P
V
Q
R
I
S
A
E
E
A
L
Q
H
P
Y
F
--
S
D
F
------------------------------------------------------------------------------------------------------------------------------
47
HHSearch
49.78
35%
-101
- C1 -
3QYZ
13
MK01_RAT
A:
[32-325]
-----------------------
L
S
Y
I
G
E
G
A
Y
G
M
V
C
S
A
Y
D
N
--
L
N
K
V
R
V
A
I
K
K
I
----
S
P
F
E
H
Q
T
Y
C
----
Q
R
T
L
R
E
I
K
I
L
L
R
F
R
H
E
N
I
I
G
I
N
D
I
I
R
A
P
T
IEQ-
M
---
K
D
V
Y
I
V
Q
D
L
M
E
T
D
L
Y
K
L
L
K
T
Q
----------
H
L
S
N
D
H
I
C
Y
F
L
Y
Q
I
L
R
G
L
K
Y
I
H
S
A
N
V
L
H
R
D
L
K
P
S
N
L
L
L
N
T
----
T
C
D
L
K
I
C
D
F
G
L
A
R
V
A
D
P
D
H
D
H
T
G
F
L
T
E
Y
V
A
T
R
W
Y
R
A
P
E
I
M
L
N
S
K
G
Y
T
K
S
I
D
I
W
S
V
G
C
I
L
A
E
M
L
S
-----------
N
R
P
I
F
P
G
K
H
-------------
Y
L
D
Q
L
N
H
I
L
G
I
L
G
S
P
S
Q
E
D
L
N
C
I
I
N
L
K
A
-----
R
N
Y
L
L
S
L
P
H
K
N
K
-
V
P
W
N
R
L
F
----
P
N
A
--
D
S
K
A
L
D
L
L
D
K
M
L
T
F
N
P
H
K
R
I
E
V
E
Q
A
L
A
H
P
Y
L
--
E
Q
Y
Y
D
P
S
D
-------------------------------------------------------------------------------------------------------------------------
46
HHSearch
46.40
35%
-117
- C1 -
2FST
3
MK14_HUMAN
X:
[34-323]
-----------------------
L
S
P
V
G
----
G
S
V
C
A
A
F
D
T
K
--
T
G
L
R
V
A
V
K
K
L
----
S
R
P
F
---
Q
S
IIHA
K
R
T
Y
R
E
L
R
L
L
K
H
M
K
H
E
N
V
I
G
L
L
D
V
F
T
P
A
R
SLEE
F
---
N
D
V
Y
L
V
T
H
L
M
G
A
D
L
N
---------------
Q
K
L
T
D
D
H
V
Q
F
L
I
Y
Q
I
L
R
G
L
K
Y
I
H
S
A
D
I
I
H
R
D
L
K
P
S
N
L
A
V
N
----
E
D
C
E
L
K
I
L
D
---------------------
A
T
R
W
Y
R
A
P
E
I
M
L
N
W
M
H
Y
N
Q
T
V
D
I
W
S
V
G
C
I
M
A
E
L
L
T
-----------
G
R
T
L
F
P
G
T
D
-------------
H
I
D
Q
L
K
L
I
L
R
L
V
G
T
P
G
A
E
L
L
K
K
I
S
S
-----
E
S
A
R
N
Y
I
Q
S
LT
Q
M
P
K
-
M
N
F
A
N
V
F
----
I
G
A
--
N
P
L
A
V
D
L
L
E
K
M
L
V
L
D
S
D
K
R
I
T
A
A
Q
A
L
A
H
A
Y
F
--
A
Q
Y
H
D
P
D
D
-------------------------------------------------------------------------------------------------------------------------