@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00069_CDK8_H: (2014-08-15 )
MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY

Atome Classification :

(22 SA) .........10........20........30........40........50...----....---.60---.........70........80........----90--.........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......-----------230......---.240....-...250.......260.......270.......280....--...290........300..--.....310.......320.......330...--....340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---EDIKTSNP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY
2 PsiBlast_PDB 97.54100%-126 - C1 -4F6S CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRAS--------LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-----------------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCR----------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 97.53100%-127 - C1 -4F7N CDK8_HUMAN A:[3-363] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRAS------VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF-----------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---E-----NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFLTE-------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 97.39100%-122 - C1 -4F6W CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASK-----VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA------------------TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 96.92100%-124 - C1 -4F7S CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASK------QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP---------TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCR--------TSNP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 96.90100%-123 - C1 -4F6U CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASK-----VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF-----------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---E-----NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 96.83100%-128 - C1 -4F70 CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASKA------LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADM--------------------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCR----------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 95.27100%-126 - C1 -4F7J CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHR---------QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF------------------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 94.83100%-124 - C1 -4F7L CDK8_HUMAN A:[3-361] MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRAS-------QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG--------------------TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPYPKREFL---------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 93.63100%-132 - C1 -3RGF CDK8_HUMAN A:[3-355] MDYDFKVKLSSERERVEDLFEYEGCKVG-----HVYKAKRKDGKDDKDYALKQI----EGTG---IS----MSACREIALLRELKHPNVISLQKVFLSHA----D---RKVWLLFDYAEHDLWHIIKFHRASK-------LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR----------------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-----------SEPIFHCRQ---------NP-YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYTN-CSLIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDPLPTSDVFAGCQIPY---------------------------------------------------------------------------------------------------------------
33 HHSearch 61.0635%-114 - C1 -3N9X ? A:[31-384] -----------------------KHLIGRGSYGYVYLAYDKN--TEKNVAIKKV----NRMF---EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD----LLKFDELYIVLEIADSDLKKLFK---------TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ----DCSVKVCDFGLARTI------------HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP------HEKSNRDQLNIIFNIIGTPTEDDLKNINKP-EVIKYIKLFP----HRKP-INLKQKYP----SI--SDDGINLLESMLKFNPNKRITIDQALDHPYL--KDVRKKKLE---TKKIILP--------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 59.8838%-107 - C1 -3QQF CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 59.5138%-103 - C1 -3PXF CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 59.0138%-104 - C1 -3QQG CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 58.9138%-102 - C1 -3PXY CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 58.7238%-105 - C1 -3PY0 CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 58.6538%-104 - C1 -3PXZ CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 58.3638%-105 - C1 -3QL8 CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 56.8938% -99 - C1 -3PXQ CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIR----TEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 56.4038% -96 - C1 -3PY1 CDK2_HUMAN A:[17-302] -------------------------KIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEG---VP----STAIREISLLKELNHPNIVKLLDVI--HT----E---NKLYLVFEFLHQDL---KKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-----------RRALFPGDS---EI----------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ--DFS------------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP---------------------------------------------------------------------------------------------------------------------------
49 HHSearch 53.1641%-113 - C1 -4AU8 CDK5_HUMAN A:[11-293] -----------------------LEKIGEGTYGTVFKAKNRE--THEIVALKRV------------P----SSALREICLLKELKHKNIVRLHDVLH------------KLTLVFEFCDQDLKKYFDSC-----N---GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR----NGELKLADFGLARAFGIPVR-----SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA----------GRPLFPGND---V----------DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP--------MYPATTSLV----NVVPKL--NATGRDLLQNLLKCNPVQRISAEEALQHPYF--SDF------------------------------------------------------------------------------------------------------------------------------
47 HHSearch 49.7835%-101 - C1 -3QYZ MK01_RAT A:[32-325] -----------------------LSYIGEGAYGMVCSAYDN--LNKVRVAIKKI----SPFEHQTYC----QRTLREIKILLRFRHENIIGINDIIRAPTIEQ-M---KDVYIVQDLMETDLYKLLKTQ----------HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT----TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----------NRPIFPGKH-------------YLDQLNHILGILGSPSQEDLNCIINLKA-----RNYLLSLPHKNK-VPWNRLF----PNA--DSKALDLLDKMLTFNPHKRIEVEQALAHPYL--EQYYDPSD-------------------------------------------------------------------------------------------------------------------------
46 HHSearch 46.4035%-117 - C1 -2FST MK14_HUMAN X:[34-323] -----------------------LSPVG----GSVCAAFDTK--TGLRVAVKKL----SRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF---NDVYLVTHLMGADLN---------------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN----EDCELKILD---------------------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-----------GRTLFPGTD-------------HIDQLKLILRLVGTPGAELLKKISS-----ESARNYIQSLTQMPK-MNFANVF----IGA--NPLAVDLLEKMLVLDSDKRITAAQALAHAYF--AQYHDPDD-------------------------------------------------------------------------------------------------------------------------