Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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3D Common Core:

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Modeller Result :

Complexes Modeling

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : PF00105_RARA_M: (2014-08-26 )
MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTSLQHQLPVSGYSTPSPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFDVGMSKESVRNDRNKKKKEAPKPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQSGGGTRDGGGLAPPPGSCSPSLSPSSHRSSPATQSP

Atome Classification :

	(25 SA)									.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200--......--...210....---...220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400...----....410.......420.......430.......440.......450.......460
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTSLQHQLPVSGYSTPSPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFDVGMSKESVRNDRNKKKKEAPKPECSESYTLTPEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLENSEGLDTLSGQSGGGTRDGGGLAPPPGSCSPSLSPSSHRSSPATQSP
1	PsiBlast_PDB	89.44	99%	-123	- C2 -	3A9E		RARA_HUMAN	B:[25-263]	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYTLTPEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
5	PsiBlast_PDB	89.37	99%	-131	- C2 -	1DKF		RARA_HUMAN	B:[1-235]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEVGELIEKVRKAHQETFP----ALCQLG--KYTT---SEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLEN----------------------------------------------
6	PsiBlast_PDB	88.46	99%	-124	- C2 -	4DQM		RARA_HUMAN	A:[1-234]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
2	PsiBlast_PDB	88.37	99%	-124	- C2 -	3KMR		RARA_HUMAN	A:[27-260]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
23	PsiBlast_CBE	87.68	99%	-124	- C2 -	4DQM		RARA_HUMAN	C:[1-234]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
25	PsiBlast_CBE	86.07	86%	-121	- C2 -	4DM6		RARB_HUMAN	B:[24-262]	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEMTAELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLEN----------------------------------------------
24	PsiBlast_CBE	84.80	86%	-120	- C2 -	4DM8		RARB_HUMAN	B:[24-262]	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEMTAELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLEN----------------------------------------------
8	PsiBlast_PDB	84.62	86%	-119	- C2 -	4DM6		RARB_HUMAN	A:[22-261]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESYEMTAELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
14	PsiBlast_PDB	84.53	83%	-121	- C2 -	1EXX		RARG_HUMAN	A:[5-240]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
17	PsiBlast_PDB	84.47	83%	-122	- C2 -	1FCZ		RARG_HUMAN	A:[1-235]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
15	PsiBlast_PDB	84.42	83%	-123	- C2 -	1FCY		RARG_HUMAN	A:[2-236]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
16	PsiBlast_PDB	84.38	83%	-122	- C2 -	1FCX		RARG_HUMAN	A:[1-235]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
22	PsiBlast_CBE	84.35	85%	-112	- C2 -	1XDK		RARB_MOUSE	F:[30-274]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLENSEGHEPLTPS------------------------------------
41	HHSearch	84.25	86%	-112	- C2 -	1XDK		RARB_MOUSE	B:[30-274]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLENSEGHEPLTPS------------------------------------
12	PsiBlast_PDB	84.24	81%	-119	- C2 -	4LBD		RARG_HUMAN	A:[26-262]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLEN----------------------------------------------
13	PsiBlast_PDB	84.14	83%	-120	- C2 -	1EXA		RARG_HUMAN	A:[5-240]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
18	PsiBlast_PDB	84.06	83%	-121	- C2 -	1FD0		RARG_HUMAN	A:[1-235]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLE-----------------------------------------------
9	PsiBlast_PDB	84.00	86%	-118	- C2 -	4DM8		RARB_HUMAN	A:[22-261]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESYEMTAELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRP--PHMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLE-----------------------------------------------
11	PsiBlast_PDB	83.53	81%	-113	- C2 -	3LBD		RARG_HUMAN	A:[26-262]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLEN----------------------------------------------
10	PsiBlast_PDB	83.00	81%	-115	- C2 -	2LBD		RARG_HUMAN	A:[26-263]	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPQLEELITKVSKAHQETFP----SLCQLG--KYTTNSSADH---RVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGP----MPPLIREMLENP---------------------------------------------
7	PsiBlast_PDB	82.71	86%	-121	- C2 -	1XAP		RARB_HUMAN	A:[28-262]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AELDDLTEKIRKAHQETFP----SLCQLG--KYTTNSSADH---RVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRP---HMFPKILMKITDLRSISAKGAERVITLKMEIPGS----MPPLIQEMLEN----------------------------------------------
3	PsiBlast_PDB	82.49	99%	-120	- C2 -	3KMZ		RARA_HUMAN	B:[26-246]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKME-----------------------------------------------------------------
21	PsiBlast_CBE	81.89	99%	-119	- C2 -	3KMZ		RARA_HUMAN	A:[26-246]	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPEVGELIEKVRKAHQETFP----ALCQLG--KYTTNNSSEQ---RVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKME-----------------------------------------------------------------
27	Fugue	67.99	34%	-107	- C2 -	1BSX		THB_HUMAN	A:[10-260]	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEPTDEEWELIKTVTEAHVATNA----QGSHWKQKRKFLPEDIGQ---APKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTEL---FPPLFLEVFED----------------------------------------------
56	HHSearch	65.02	30%	-109	- C2 -	1NQ7		RORB_RAT	A:[3-244]	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEIDRIAQNIIKSHLETCQYTMEELHQLA---WQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGK-YGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHL-DDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFN-----------------------------------------------