@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PF00105_RARB_M: (2014-08-26 )
MSTSSHACPVPAVRGHMTHYPAAPYPLLFPPVIRGLSLPPLHGLHGHPPPSGCSTPSPASVGQACQRTTGGSQFAASTKWTPSLNAAIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNIAEHSPSVSPSSVENSGVSQSPLLQ
Atome Classification :
(25 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.....----..230.--......240.---......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430----.......440.......450.......460.......470.......480
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MSTSSHACPVPAVRGHMTHYPAAPYPL
L
F
P
P
V
IRGLSLPPLHGLHGHPPPSGCSTPS
P
A
S
V
G
Q
A
C
Q
RTTGGS
Q
F
AASTKWTPSL
N
A
A
I
ETQSTSSEELVPSPPSPLPPPRVYK
P
C
F
V
CQDKSSGYHYGV
S
A
C
E
G
C
K
G
F
F
R
R
S
I
QKN
M
I
Y
T
CHRDKN
C
V
I
N
K
V
T
R
N
R
C
Q
Y
C
R
L
Q
K
C
F
E
VGM
S
K
E
S
V
RNDRNKKKKEP
S
K
Q
E
C
T
E
S
Y
E
M
T
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
LG--KYTTNSSAD
H
---
R
V
R
L
DLG
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
RLPGFTGL
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
CTRYTPEQD
T
M
TFSDG
L
T
L
N
R
T
QMHNAGF
G
P
L
T
D
L
V
F
T
F
A
N
QLLPLEMDDTE
T
G
L
L
S
A
I
C
L
ICG
D
R
Q
DLEEPT
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
KRRPSKP
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
SAKGA
E
R
V
I
T
L
K
M
EIPGS----M
P
P
L
I
Q
E
M
L
ENSEGHEPLTPSSSGNIAEHSPSVSPSSVENSGVSQSPLLQ
23
PsiBlast_CBE
91.84
100%
-125
- C2 -
4DM6
2
RARB_HUMAN
B:
[24-262]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
E
M
T
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
S
K
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
---------------------------------------
22
PsiBlast_CBE
90.69
100%
-123
- C2 -
4DM8
2
RARB_HUMAN
B:
[24-262]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
E
M
T
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
S
K
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
---------------------------------------
3
PsiBlast_PDB
90.36
100%
-121
- C2 -
4DM6
2
RARB_HUMAN
A:
[22-261]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
S
Y
E
M
T
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
S
K
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
1
PsiBlast_PDB
90.28
100%
-116
- C2 -
1XDK
2
RARB_MOUSE
B:
[30-274]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
S
K
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
S
E
G
H
E
P
L
T
P
S
-----------------------------
21
PsiBlast_CBE
89.83
100%
-117
- C2 -
1XDK
2
RARB_MOUSE
F:
[30-274]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
S
K
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
S
E
G
H
E
P
L
T
P
S
-----------------------------
4
PsiBlast_PDB
89.79
100%
-122
- C2 -
4DM8
2
RARB_HUMAN
A:
[22-261]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
S
Y
E
M
T
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
P
--
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
5
PsiBlast_PDB
88.91
87%
-121
- C2 -
3A9E
2
RARA_HUMAN
B:
[25-263]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
Y
T
L
T
P
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
2
PsiBlast_PDB
87.90
100%
-123
- C2 -
1XAP
1
RARB_HUMAN
A:
[28-262]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
E
L
D
D
L
T
E
K
I
R
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
R
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
T
F
A
N
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
E
P
T
K
V
D
K
L
Q
E
P
L
L
E
A
L
K
I
Y
I
R
K
R
R
---
P
H
M
F
P
K
I
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
---------------------------------------
14
PsiBlast_PDB
87.64
86%
-122
- C2 -
4LBD
1
RARG_HUMAN
A:
[26-262]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
N
---------------------------------------
8
PsiBlast_PDB
87.51
88%
-128
- C2 -
1DKF
1
RARA_HUMAN
B:
[2-235]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
---
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
N
---------------------------------------
43
HHSearch
86.98
87%
-125
- C2 -
1FCY
2
RARG_HUMAN
A:
[1-236]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
11
PsiBlast_PDB
86.92
86%
-123
- C2 -
1EXX
2
RARG_HUMAN
A:
[5-240]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
6
PsiBlast_PDB
86.83
87%
-124
- C2 -
3KMR
2
RARA_HUMAN
A:
[27-260]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
13
PsiBlast_PDB
86.82
86%
-115
- C2 -
3LBD
1
RARG_HUMAN
A:
[26-262]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
N
---------------------------------------
12
PsiBlast_PDB
86.39
86%
-118
- C2 -
2LBD
1
RARG_HUMAN
A:
[26-263]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
N
P
--------------------------------------
16
PsiBlast_PDB
86.34
88%
-125
- C2 -
1FCX
2
RARG_HUMAN
A:
[3-235]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
10
PsiBlast_PDB
86.34
86%
-122
- C2 -
1EXA
2
RARG_HUMAN
A:
[5-240]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
P
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
17
PsiBlast_PDB
86.24
88%
-125
- C2 -
1FCZ
2
RARG_HUMAN
A:
[3-235]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
18
PsiBlast_PDB
86.21
88%
-125
- C2 -
1FD0
2
RARG_HUMAN
A:
[3-235]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
E
E
L
I
T
K
V
S
K
A
H
Q
E
T
F
P
----
S
L
C
Q
L
G
--
K
Y
T
T
N
S
S
A
D
H
---
R
V
Q
L
D
L
G
L
W
D
K
F
S
E
L
A
T
K
C
I
I
K
I
V
E
F
A
K
R
L
P
G
F
T
G
L
S
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
M
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
G
Q
L
L
P
L
E
M
D
D
T
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
M
D
L
E
E
P
E
K
V
D
K
L
Q
E
P
L
L
E
A
L
R
L
Y
A
R
R
R
R
P
S
Q
P
Y
M
F
P
R
M
L
M
K
I
T
D
L
R
G
I
S
T
K
G
A
E
R
A
I
T
L
K
M
E
I
P
G
P
----
M
P
P
L
I
R
E
M
L
E
----------------------------------------
25
PsiBlast_CBE
85.73
88%
-124
- C2 -
4DQM
2
RARA_HUMAN
C:
[2-234]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
9
PsiBlast_PDB
85.44
88%
-123
- C2 -
4DQM
2
RARA_HUMAN
A:
[2-234]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
I
P
G
S
----
M
P
P
L
I
Q
E
M
L
E
----------------------------------------
7
PsiBlast_PDB
81.04
87%
-118
- C2 -
3KMZ
7
RARA_HUMAN
B:
[26-246]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
P
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
----------------------------------------------------------
24
PsiBlast_CBE
80.40
87%
-118
- C2 -
3KMZ
8
RARA_HUMAN
A:
[26-246]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
P
E
V
G
E
L
I
E
K
V
R
K
A
H
Q
E
T
F
P
----
A
L
C
Q
L
G
--
K
Y
T
T
N
N
S
S
E
Q
---
R
V
S
L
D
I
D
L
W
D
K
F
S
E
L
S
T
K
C
I
I
K
T
V
E
F
A
K
Q
L
P
G
F
T
T
L
T
I
A
D
Q
I
T
L
L
K
A
A
C
L
D
I
L
I
L
R
I
C
T
R
Y
T
P
E
Q
D
T
M
T
F
S
D
G
L
T
L
N
R
T
Q
M
H
N
A
G
F
G
P
L
T
D
L
V
F
A
F
A
N
Q
L
L
P
L
E
M
D
D
A
E
T
G
L
L
S
A
I
C
L
I
C
G
D
R
Q
D
L
E
Q
P
D
R
V
D
M
L
Q
E
P
L
L
E
A
L
K
V
Y
V
R
K
R
R
P
S
R
P
H
M
F
P
K
M
L
M
K
I
T
D
L
R
S
I
S
A
K
G
A
E
R
V
I
T
L
K
M
E
----------------------------------------------------------
27
Fugue
72.98
35%
-105
- C2 -
1BSX
2
THB_HUMAN
A:
[10-260]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
P
E
P
T
D
E
E
W
E
L
I
K
T
V
T
E
A
H
V
A
T
N
A
----
Q
G
S
H
W
K
QK
R
K
F
L
P
E
D
I
G
Q
---
A
P
K
V
D
L
E
A
F
S
H
F
T
K
I
I
T
P
A
I
T
R
V
V
D
F
A
K
K
L
P
M
F
C
E
L
P
C
E
D
Q
I
I
L
L
K
G
C
C
M
E
I
M
S
L
R
A
A
V
R
Y
D
P
E
S
E
T
L
T
L
N
G
E
M
A
V
T
R
G
Q
L
K
N
G
G
L
G
V
V
S
D
A
I
F
D
L
G
M
S
L
S
S
F
N
L
D
D
T
E
V
A
L
L
Q
A
V
L
L
M
S
S
D
R
P
G
L
A
C
V
E
R
I
E
K
Y
Q
D
S
F
L
L
A
F
E
H
Y
I
N
Y
R
K
H
H
V
T
H
F
W
P
K
L
L
M
K
V
T
D
L
R
M
I
G
A
C
H
A
S
R
F
L
H
M
K
V
E
C
P
T
E
L---
F
P
P
L
F
L
E
V
F
E
D
---------------------------------------
56
HHSearch
68.83
32%
-109
- C2 -
1NQ7
2
RORB_RAT
A:
[3-244]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
E
I
D
R
I
A
Q
N
I
I
K
S
H
L
E
T
C
Q
YT
M
E
E
L
H
Q
L
A
---
W
Q
T
H
T
Y
E
E
I
K
A
Y
Q
S
K
S
R
E
A
L
W
Q
Q
C
A
I
Q
I
T
H
A
I
Q
Y
V
V
E
F
A
K
R
I
T
G
F
M
E
L
C
Q
N
D
Q
I
L
L
L
K
S
G
C
L
E
V
V
L
V
R
M
C
R
A
F
N
P
L
N
N
T
V
L
F
E
G
K
-
Y
G
G
M
Q
M
F
K
A
L
G
S
D
D
L
V
N
E
A
F
D
F
A
K
N
L
C
S
L
Q
L
T
E
E
E
I
A
L
F
S
S
A
V
L
I
S
P
D
R
A
W
L
L
E
P
R
K
V
Q
K
L
Q
E
K
I
Y
F
A
L
Q
H
V
I
Q
K
N
H
L
-
D
D
E
T
L
A
K
L
I
A
K
I
P
T
I
T
A
V
C
N
L
H
G
E
K
L
Q
V
F
K
Q
S
H
P
D
I
V
N
TL
F
P
P
L
Y
K
E
L
F
N
----------------------------------------