Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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Sequence color : MutatedHelixStrandConserved

Query sequence : PF00413_MMP11_: (2014-09-06 )
MARAACLLRAISRVLLLPLPLLLLLLLLLPSPLMARARPPESHRHHPVKKGPRLLHAALPNTLTSVPASHWVPSPAGSSRPLRCGVPDLPDVLNARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYPLSLSPDDRRGIQHLYGRPQMAPTSPAPTLSSQAGTDTNEIALLEPETPPDVCETSFDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALASRHWQGLPSPVDAAFEDAQGQIWFFQGAQYWVYDGEKPVLGPAPLSKLGLQGSPVHAALVWGPEKNKIYFFRGGDYWRFHPRTQRVDNPVPRRSTDWRGVPSEIDAAFQDAEGYAYFLRGHLYWKFDPVKVKVLEGFPRPVGPDFFDCAEPANTFR

Atome Classification :

	(14 SA)									.........10........20........30........40........50........60........70........80........90........100.....--..110.......120.......130.......140.......150.-.-------.....160.......170.......180.......---190.......200.....--..210.......220.......230.......240.--.--.--....250.......260.......270.......280.......290.......--300.--........310.......320.......330....----...340.......350.-.-.....360.......370.....-..380.-...-..--.390.-......400.......410.......420.......-430........440.......450.......460.......470.......480.......490
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MARAACLLRAISRVLLLPLPLLLLLLLLLPSPLMARARPPESHRHHPVKKGPRLLHAALPNTLTSVPASHWVPSPAGSSRPLRCGVPDLPDVLNARNRQKRFVLSGG--RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVH-E-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGD--NQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--R--Y--PLSLSPDDRRGIQHLYGRPQMAPTSPAPTLSSQAGTDTNEIALLEPETPPDVCE--T--S--FDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALA----SRHWQGLPSPVDAAFED-A-QGQIWFFQGAQYWVYDGEKPVLG-PAPLSK-LGL-QG--SPVHA-ALVWGPEKNKIYFFRGGDYWRFHPRTQRVDNPVPRR-S-TDWRGVPSEIDAAFQDAEGYAYFLRGHLYWKFDPVKVKVLEGFPRPVGPDFFDCAEPANTFR
7	PsiBlast_PDB	80.85	36%	-112	- C1 -	4FVL		?	A:[9-361]	-------------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-D-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWT-SS--SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGK--S--HFMLPDDDVQGIQSLYGPGDEDPNPKHPKT-------------------PDKCDPSL--S--LDAITSLRGETMIFKDRFFWRLHPQQVDAEL-FLT----KSFWPELPNRIDAAYEHPS-HDLIFIFRGRKFWALNGYDILEGYPKKISE-LGLPKE--VKKIS-AAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIE-EDFPGIGDKVDAVYE-KNGYIYFFNGPIQFEYSIWSNRIVRVMP------------------
8	PsiBlast_PDB	79.45	36%	-110	- C1 -	4G0D		MMP13_HUMAN	A:[9-361]	-------------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-D-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWT-SS--SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGK--S--HFMLPDDDVQGIQSLYGPGDEDPNPKHPKT-------------------PDKCDPSL--S--LDAITSLRGETMIFKDRFFWRLHPQQVDAEL-FLT----KSFWPELPNRIDAAYEHPS-HDLIFIFRGRKFWALNGYDILEGYPKKISE-LGLPKE--VKKIS-AAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIE-EDFPGIGDKVDAVYE-KNGYIYFFNGPIQFEYSIWSNRIVRVMP------------------
4	PsiBlast_PDB	78.07	39%	-107	- C1 -	1FBL		MMP1_PIG	A:[1-356]	-----------------------------------------------------------------------------------------------------FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS-E-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWT-KN--FRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--T--G--DVQLSQDDIDGIQAIYG-PSENPVQPSG-----------------PQT-PQVCD--SKLT--FDAITTLRGELMFFKDRFYMRTNS-----FYPEVELNFISVFWPQVPNGLQAAYEI-ADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSFGF-PS--TVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMIA-EEFPGIGNKVDAVFQ-KDGFLYFFHGTRQYQFDFKTKRIL----------------------
38	HHSearch	73.00	38%	-103	- C1 -	3BA0		MMP12_HUMAN	A:[1-365]	---------------------------------------------------------------------------------------------------------GP--VWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKIN-T-------GMADILVVFARGAHGDDHAFDGKGGILAHAFGPGS---GIGGDAHFDEDEFWTTH---SGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKY--V--DINTFRLSADDIRGIQSLYGDPKENQRL--PN---------------PDNSEPALCD--P--NLSFDAVTTVGNKIFFFKDRFFWLKVSE-RPKTSVNLI----SSLWPTLPSGIEAAYEIEA-RNQVFLFKDDKYWLISNLRPEPNYPKSIHS-FGF-PNFVKKIDA-AVFNP-RFYRTYFFVDNQYWRYDERRQMMDPGYPKL-ITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLLQRIT---KTLKSNSWFGC--------
1	PsiBlast_PDB	54.94	100%	-107	- C1 -	1HV5		MMP11_MOUSE	A:[2-162]	-----------------------------------------------------------------------------------------------------FVLSGG--RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVH-E-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGD--NQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--R--Y--PLSLSPDDRRGIQHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25	PsiBlast_CBE	54.91	100%	-105	- C1 -	1HV5		MMP11_MOUSE	B:[2-164]	-----------------------------------------------------------------------------------------------------FVLSGG--RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVH-E-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGD--NQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--R--Y--PLSLSPDDRRGIQHLYGRP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21	PsiBlast_CBE	52.29	100%	-100	- C1 -	1HV5		MMP11_MOUSE	F:[2-162]	-----------------------------------------------------------------------------------------------------FVLSGG--RWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSEVTPLTFTEVH-E-------GRADIMIDFARYWHGDNLPFDGPGGILAHAFFPKT---HREGDVHFDYDETWTIGD--NQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTF--R--Y--PLSLSPDDRRGIQHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12	PsiBlast_PDB	41.02	55%	-96	- C1 -	1HFC		MMP1_HUMAN	A:[7-163]	-----------------------------------------------------------------------------------------------------------P-RWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVS-E-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWT-NN--FREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--G--DVQLAQDDIDGIQAIYGRS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13	PsiBlast_PDB	40.40	55%	-90	- C1 -	2TCL		MMP1_HUMAN	A:[2-164]	-------------------------------------------------------------------------------------------------------LTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVS-E-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWT-NN--FREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--G--DVQLAQDDIDGIQAIYGRSQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55	HHSearch	39.65	51%	-94	- C1 -	3AYU		MMP2_HUMAN	A:[2-165]	----------------------------------------------------------------------------------------------------NFFPRKP--KWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIH-D-------GEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGT---GVGGDSHFDDDELWTLGK--GVGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTY--T--K--NFRLSQDDIKGIQELYGAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52	HHSearch	39.60	46%	-98	- C1 -	1RM8		MMP16_HUMAN	A:[1-169]	---------------------------------------------------------------------------------------------------------GQ--KWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVP-YSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY--METD--NFKLPNDDLQGIQKIYGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62	HHSearch	37.98	49%	-95	- C1 -	1I76		MMP8_HUMAN	A:[2-163]	-----------------------------------------------------------------------------------------------------LTPGNP--KWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTNT---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAF--RETS--NYSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54	HHSearch	37.06	43%	-92	- C1 -	4IN9		?	A:[1-165]	-----------------------------------------------------------------------------------------------------YVLQGS--KWNKTTLKYYIYN----LTTTERENAIRSAFALWSDKSTLSFIQVYNP-------NQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSIN---GSGIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTG--I-----KRQLDNDDCLAVWDLYGYP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53	HHSearch	36.36	47%	-91	- C1 -	4H1Q		MMP9_HUMAN	A:[3-160]	--------------------------------------------------------------------------------------------------------GDL--KWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVY-S-------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGP---GIQGDAHFDDDELWSLGK--GQGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRF--T--E--GPPLHKDDVNGIRHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------