@TOME V2.3
(Nov 2016)

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF01471_MMP1_H: (2014-09-24 )
MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN

Atome Classification :

(17 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150..-------.....160.......170.......180.......190.......200...-.---.-..210.......220.......230.......240--.--..--....250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MHSFPPLLLLLFWGVVSHSFPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQFVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN-N---F-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--GD--VQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFNCRKN
21 PsiBlast_CBE 98.26100%-101 - C1 -1SU3 MMP1_HUMAN B:[12-446] ------------------------------VDLVQKYLEKYYNLK-----------SGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVA--------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN-N---F-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--GD--VQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKRILTLQKANSWFN----
4 PsiBlast_PDB 85.6087%-108 - C1 -1FBL MMP1_PIG A:[1-367] ---------------------------------------------------------------------------------------------------FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSE-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTK-N---F-RDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--T--GD--VQLSQDDIDGIQAIYGPSENPVQPSGPQTPQVCDSKLTFDAITTLRGELMFFKDRFYMRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVDAVFQKDGFLYFFHGTRQYQFDFKTKRILTLQKANSWFNC---
7 PsiBlast_PDB 75.8951%-103 - C1 -4G0D MMP13_HUMAN A:[9-368] -----------------------------------------------------------------------------------------------------------KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHD-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTS-S---S-KGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTY--T--GKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKI-SELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC---
36 HHSearch 75.4850%-102 - C1 -4FVL ? A:[1-368] ---------------------------------------------------------------------------------------------------YNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHD-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTS-S---S-KGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTY--TGKSH--FMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKIS-ELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC---
10 PsiBlast_PDB 45.81100% -92 - C1 -1HFC MMP1_HUMAN A:[7-163] ----------------------------------------------------------------------------------------------------------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN-N---F-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--GD--VQLAQDDIDGIQAIYGRS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 45.2298% -92 - C1 -1CGL MMP1_HUMAN B:[6-165] ---------------------------------------------------------------------------------------------------------NPRWEQTHLRYRIENYTPDLPRADVDHAIEKAFQLWSDVTPLTFTKV----------QADIMISFVRGDHRDNSPFDGPGGNLAHAFDPGPGIGGDAHFDEDERWTN-N---F-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--GD--VQLAQDDIDGIQAIYGRSQN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 45.15100% -81 - C1 -2TCL MMP1_HUMAN A:[2-164] -----------------------------------------------------------------------------------------------------LTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTN-N---F-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--S--GD--VQLAQDDIDGIQAIYGRSQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 41.2866% -82 - C1 -1I73 MMP8_HUMAN A:[1-163] ----------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 41.2566% -83 - C1 -1BZS MMP8_HUMAN A:[1-164] ---------------------------------------------------------------------------------------------------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 41.1766% -82 - C1 -1KBC MMP8_HUMAN A:[1-164] ---------------------------------------------------------------------------------------------------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 41.1366% -82 - C1 -1ZP5 MMP8_HUMAN A:[1-163] ----------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 40.8566% -80 - C1 -1I76 MMP8_HUMAN A:[1-163] ----------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51 HHSearch 39.9953% -79 - C1 -3AYU MMP2_HUMAN A:[1-166] ---------------------------------------------------------------------------------------------------YNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHD-------GEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTL-G---KGVGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTY--T--KN--FRLSQDDIKGIQELYGASP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 39.6766% -76 - C1 -1ZS0 MMP8_HUMAN A:[1-163] ----------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 39.1666% -79 - C1 -1JAP MMP8_HUMAN A:[7-163] ----------------------------------------------------------------------------------------------------------PKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-T---S-ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRET--SN--YSLPQDDIDGIQAIYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54 HHSearch 38.3552% -83 - C1 -1RM8 MMP16_HUMAN A:[2-169] ----------------------------------------------------------------------------------------------------------QKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTL-GNPNH-DGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMET--DN--FKLPNDDLQGIQKIYGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 HHSearch 37.9054% -74 - C1 -4H1Q MMP9_HUMAN A:[1-160] ------------------------------------------------------------------------------------------------------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYS-------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGK---G-QGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRF--T--EG--PPLHKDDVNGIRHLYG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------