@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PF01471_MMP3_H: (2014-09-24 )
MKSLPILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEPGTPANCDPALSFDAVSTLRGEILIFKDRHFWRKSLRKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTLGFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDAVFEEFGFFYFFTGSSQLEFDPNAKKVTHTLKSNSWLNC
Atome Classification :
(37 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.-.-------.....160.......170.......180.......---190.......200...-.---.-..210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.....-..380.......390.......400.......410.......420.......430.......440.......450.......460.......470.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MKSL
P
I
L
L
L
L
C
V
A
V
CSAYPLDGAARGEDT
S
M
N
L
V
Q
K
Y
L
E
N
Y
Y
D
L
K
K
D
V
K
Q
F
V
R
RKDS
G
P
V
V
K
K
I
R
E
M
Q
K
F
LG
L
E
V
TGKLD
S
D
T
L
E
V
M
RKPRCGVPDVGHFRTFPGIPKW
R
K
T
H
L
T
Y
R
I
VNYTPDL
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
EVTP
L
T
F
S
R
L
Y-E-------GEA
D
I
M
I
S
F
A
VREHGDFYPFDGPGN
V
L
A
H
AYAPGP---GINGDAHFDD
D
E
Q
WTK-D---T-TGT
N
L
F
L
V
A
A
H
EI
G
H
S
LGLFHSANT
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
RLSQDD
I
N
G
I
Q
S
LYGPPPDSPETPLVPTEPVPPEPGTPANCDPAL
S
F
D
A
V
S
TLRG
E
I
L
I
FKD
R
H
F
W
R
K
S
L
R
K
LE
P
E
L
H
L
I
S
S
F
WPSLPSGV
D
A
A
YEVTSK
D
L
V
F
I
F
KG
N
Q
F
W
A
I
RGNEVRAGYPRGIH-TLGFPP
T
V
R
K
I
D
A
AISDKEK
N
K
T
Y
F
F
V
ED
K
Y
W
R
F
D
EKRNSMEPGF
P
K
Q
I
A
E
DFPGI
D
S
K
I
D
A
V
F
E
EF
G
F
F
Y
F
F
TGSS
Q
L
E
FDPNA
K
K
V
T
H
T
LKSNSWLNC
7
PsiBlast_PDB
84.44
51%
-97
- C3 -
4G0D
12
MMP13_HUMAN
A:
[1-368]
---------------------------------------------------------------------------------------------------
Y
N
V
F
P
R
T
L
K
W
S
K
M
N
L
T
Y
R
I
V
N
Y
T
P
D
M
T
H
S
E
V
E
K
A
F
K
K
A
F
K
V
W
S
D
V
T
P
L
N
F
T
R
L
H
-
D
-------
G
I
A
D
I
M
I
S
F
G
I
K
E
H
G
D
F
Y
P
F
D
G
P
S
G
L
L
A
H
A
F
P
P
G
P
---
N
Y
G
G
D
A
H
F
D
D
D
E
T
W
T
S
-
S
---
S
-
K
G
Y
N
L
F
L
V
A
A
H
A
F
G
H
S
L
G
L
D
H
S
K
D
P
G
A
L
M
F
P
I
Y
-
T
Y
T
G
K
S
H
F
M
L
P
D
D
D
V
Q
G
I
Q
S
L
Y
G
P
G
D
E
D
P
N
---------
P
K
H
P
K
T
P
D
K
C
D
P
S
L
S
L
D
A
I
T
S
L
R
G
E
T
M
I
F
K
D
R
F
F
W
R
L
H
P
Q
Q
V
D
A
E
L
F
L
T
K
S
F
W
P
E
L
P
N
R
I
D
A
A
Y
E
H
P
S
H
D
L
I
F
I
F
R
G
R
K
F
W
A
L
N
G
Y
D
I
L
E
G
Y
P
K
K
I
S
-
E
L
G
L
P
K
E
V
K
K
I
S
A
A
V
H
F
E
D
T
G
K
T
L
L
F
S
G
N
Q
V
W
R
Y
D
D
T
N
H
I
M
D
K
D
Y
P
R
L
I
E
E
D
F
P
G
I
G
D
K
V
D
A
V
Y
E
K
N
G
Y
I
Y
F
F
N
G
P
I
Q
F
E
Y
S
I
W
S
N
R
I
V
R
V
M
P
A
N
S
I
L
W
C
81
HHSearch
83.90
52%
-97
- C3 -
4FVL
14
?
A:
[1-368]
---------------------------------------------------------------------------------------------------
Y
N
V
F
P
R
T
L
K
W
S
K
M
N
L
T
Y
R
I
V
N
Y
T
P
D
M
T
H
S
E
V
E
K
A
F
K
K
A
F
K
V
W
S
D
V
T
P
L
N
F
T
R
L
H
-
D
-------
G
I
A
D
I
M
I
S
F
G
I
K
E
H
G
D
F
Y
P
F
D
G
P
S
G
L
L
A
H
A
F
P
P
G
P
---
N
Y
G
G
D
A
H
F
D
D
D
E
T
W
T
S
-
S
---
S
-
K
G
Y
N
L
F
L
V
A
A
H
A
F
G
H
S
L
G
L
D
H
S
K
D
P
G
A
L
M
F
P
I
Y
T
-
Y
T
G
K
S
H
F
M
L
P
D
D
D
V
Q
G
I
Q
S
L
Y
G
P
G
D
E
----
D
P
N
P
K
-----
H
P
K
T
P
D
K
C
D
P
S
L
S
L
D
A
I
T
S
L
R
G
E
T
M
I
F
K
D
R
F
F
W
R
L
H
P
Q
Q
V
D
A
E
L
F
L
T
K
S
F
W
P
E
L
P
N
R
I
D
A
A
Y
E
H
P
S
H
D
L
I
F
I
F
R
G
R
K
F
W
A
L
N
G
Y
D
I
L
E
G
Y
P
K
K
I
S
-
E
L
G
L
P
K
E
V
K
K
I
S
A
A
V
H
F
E
D
T
G
K
T
L
L
F
S
G
N
Q
V
W
R
Y
D
D
T
N
H
I
M
D
K
D
Y
P
R
L
I
E
E
D
F
P
G
I
G
D
K
V
D
A
V
Y
E
K
N
G
Y
I
Y
F
F
N
G
P
I
Q
F
E
Y
S
I
W
S
N
R
I
V
R
V
M
P
A
N
S
I
L
W
C
2
PsiBlast_PDB
82.54
54%
-95
- C3 -
1FBL
1
MMP1_PIG
A:
[5-367]
-------------------------------------------------------------------------------------------------------
P
G
N
P
R
W
E
N
T
H
L
T
Y
R
I
E
N
Y
T
P
D
L
S
R
E
D
V
D
R
A
I
E
K
A
F
Q
L
W
S
N
V
S
P
L
T
F
T
K
V
S
-
E
-------
G
Q
A
D
I
M
I
S
F
V
R
G
D
H
R
D
N
S
P
F
D
G
P
G
G
N
L
A
H
A
F
Q
P
G
P
---
G
I
G
G
D
A
H
F
D
E
D
E
R
W
T
K
-
N
---
F
-
R
D
Y
N
L
Y
R
V
A
A
H
E
L
G
H
S
L
G
L
S
H
S
T
D
I
G
A
L
M
Y
P
N
Y
I
Y
T
G
D
V
---
Q
L
S
Q
D
D
I
D
G
I
Q
A
I
Y
G
P
----
S
E
N
P
V
Q
P
S
G
P
Q
-----
T
P
Q
V
C
D
S
K
L
T
F
D
A
I
T
T
L
R
G
E
L
M
F
F
K
D
R
F
Y
M
R
T
N
S
F
Y
P
E
V
E
L
N
F
I
S
V
F
W
P
Q
V
P
N
G
L
Q
A
A
Y
E
I
A
D
R
D
E
V
R
F
F
K
G
N
K
Y
W
A
V
R
G
Q
D
V
L
Y
G
Y
P
K
D
I
H
R
S
F
G
F
P
S
T
V
K
N
I
D
A
A
V
F
E
E
D
T
G
K
T
Y
F
F
V
A
H
E
C
W
R
Y
D
E
Y
K
Q
S
M
D
T
G
Y
P
K
M
I
A
E
E
F
P
G
I
G
N
K
V
D
A
V
F
Q
K
D
G
F
L
Y
F
F
H
G
T
R
Q
Y
Q
F
D
F
K
T
K
R
I
L
T
L
Q
K
A
N
S
W
F
N
C
30
PsiBlast_CBE
63.71
100%
-104
- C3 -
1D8M
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
63.28
100%
-100
- C3 -
1HY7
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
--
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
PsiBlast_CBE
62.85
100%
-102
- C3 -
2D1O
2
MMP3_HUMAN
A:
[1-171]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
PsiBlast_CBE
62.74
100%
-100
- C3 -
1G49
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
PsiBlast_CBE
62.69
100%
-100
- C3 -
1D5J
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
PsiBlast_CBE
62.53
100%
-101
- C3 -
1BIW
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
PsiBlast_CBE
62.44
100%
-100
- C3 -
1BQO
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
PsiBlast_CBE
62.37
100%
-99
- C3 -
1B3D
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
PsiBlast_CBE
62.28
100%
-98
- C3 -
1D8F
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
PsiBlast_CBE
62.18
100%
-98
- C3 -
1G05
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
-------
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53
PsiBlast_CBE
61.96
100%
-107
- C3 -
2USN
1
MMP3_HUMAN
A:
[1-165]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
PsiBlast_CBE
61.93
100%
-97
- C3 -
1D7X
2
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
PsiBlast_CBE
61.52
100%
-106
- C3 -
1B8Y
1
MMP3_HUMAN
A:
[1-167]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
PsiBlast_CBE
61.52
100%
-96
- C3 -
1C3I
1
MMP3_HUMAN
B:
[1-173]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
PsiBlast_CBE
61.50
100%
-99
- C3 -
2D1O
2
MMP3_HUMAN
B:
[1-168]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
PsiBlast_CBE
61.26
100%
-104
- C3 -
3OHO
1
MMP3_HUMAN
A:
[1-167]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
--
A
L
M
Y
P
L
Y
H
------
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
PsiBlast_CBE
60.90
100%
-102
- C3 -
3OHL
1
MMP3_HUMAN
A:
[1-167]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
--
A
L
M
Y
P
L
Y
H
------
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
PsiBlast_CBE
60.86
100%
-101
- C3 -
1G4K
1
MMP3_HUMAN
B:
[1-168]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52
PsiBlast_CBE
60.59
99%
-102
- C3 -
1C8T
2
MMP3_HUMAN
A:
[1-166]
------------------------------------------------------------------------------------------------------
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
Q
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
60.46
100%
-98
- C3 -
4G9L
1
MMP3_HUMAN
B:
[7-173]
---------------------------------------------------------------------------------------------------------
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
60.16
100%
-95
- C3 -
1D7X
1
MMP3_HUMAN
A:
[1-169]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
59.79
100%
-96
- C3 -
1D5J
1
MMP3_HUMAN
A:
[1-169]
---------------------------------------------------------------------------------------------------
F
R
T
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
PsiBlast_CBE
59.75
99%
-100
- C3 -
1C8T
2
MMP3_HUMAN
B:
[1-166]
------------------------------------------------------------------------------------------------------
F
P
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
Q
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
59.69
100%
-94
- C3 -
4DPE
1
MMP3_HUMAN
B:
[7-173]
---------------------------------------------------------------------------------------------------------
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
59.59
100%
-93
- C3 -
4JA1
1
MMP3_HUMAN
B:
[7-173]
---------------------------------------------------------------------------------------------------------
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
P
P
P
D
S
P
E
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62
PsiBlast_CBE
57.92
100%
-98
- C3 -
1HFS
1
MMP3_HUMAN
A:
[1-160]
--------------------------------------------------------------------------------------------------------
G
I
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
K
D
A
V
D
S
A
V
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
R
E
H
G
D
F
Y
P
F
D
G
P
G
N
V
L
A
H
A
Y
A
P
G
P
---
G
I
N
G
D
A
H
F
D
D
D
E
Q
W
T
K
-
D
---
T
-
T
G
T
N
L
F
L
V
A
A
H
E
I
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
H
S
L
T
D
L
T
R
F
R
L
S
Q
D
D
I
N
G
I
Q
S
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66
PsiBlast_CBE
53.79
84%
-98
- C3 -
1Q3A
3
MMP10_HUMAN
C:
[8-165]
----------------------------------------------------------------------------------------------------------
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
R
D
A
V
D
S
A
I
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
K
E
H
G
D
N
Y
S
F
D
G
P
G
H
S
L
A
H
A
Y
P
P
G
P
---
G
L
Y
G
D
I
H
F
D
D
D
E
K
W
T
E
-
D
---
A
-
S
G
T
N
L
F
L
V
A
A
H
E
L
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
N
S
---
L
A
Q
F
R
L
S
Q
D
D
V
N
G
I
Q
S
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
67
PsiBlast_CBE
53.75
84%
-91
- C3 -
1Q3A
3
MMP10_HUMAN
B:
[6-165]
--------------------------------------------------------------------------------------------------------
G
M
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
R
D
A
V
D
S
A
I
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
K
E
H
G
D
N
Y
S
F
D
G
P
G
H
S
L
A
H
A
Y
P
P
G
P
---
G
L
Y
G
D
I
H
F
D
D
D
E
K
W
T
E
-
D
---
A
-
S
G
T
N
L
F
L
V
A
A
H
E
L
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
N
S
F
T
E
L
A
Q
F
R
L
S
Q
D
D
V
N
G
I
Q
S
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
68
PsiBlast_CBE
53.67
84%
-94
- C3 -
1Q3A
1
MMP10_HUMAN
A:
[7-165]
---------------------------------------------------------------------------------------------------------
M
P
K
W
R
K
T
H
L
T
Y
R
I
V
N
Y
T
P
D
L
P
R
D
A
V
D
S
A
I
E
K
A
L
K
V
W
E
E
V
T
P
L
T
F
S
R
L
Y
-
E
-------
G
E
A
D
I
M
I
S
F
A
V
K
E
H
G
D
N
Y
S
F
D
G
P
G
H
S
L
A
H
A
Y
P
P
G
P
---
G
L
Y
G
D
I
H
F
D
D
D
E
K
W
T
E
-
D
---
A
-
S
G
T
N
L
F
L
V
A
A
H
E
L
G
H
S
L
G
L
F
H
S
A
N
T
E
A
L
M
Y
P
L
Y
N
S
---
L
A
Q
F
R
L
S
Q
D
D
V
N
G
I
Q
S
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
100
HHSearch
50.30
60%
-93
* C3 *
3AYU
1
MMP2_HUMAN
A:
[1-166]
---------------------------------------------------------------------------------------------------
Y
N
F
F
P
R
K
P
K
W
D
K
N
Q
I
T
Y
R
I
I
G
Y
T
P
D
L
D
P
E
T
V
D
D
A
F
A
R
A
F
Q
V
W
S
D
V
T
P
L
R
F
S
R
I
H
-
D
-------
G
E
A
D
I
M
I
N
F
G
R
W
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
A
P
G
T
---
G
V
G
G
D
S
H
F
D
D
D
E
L
W
T
L
-
G
---
K
G
V
G
Y
S
L
F
L
V
A
A
H
A
F
G
H
A
M
G
L
E
H
S
Q
D
P
G
A
L
M
A
P
I
Y
T
-
Y
T
--
K
N
F
R
L
S
Q
D
D
I
K
G
I
Q
E
L
Y
G
A
S
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
98
HHSearch
46.33
57%
-91
- C3 -
4H1Q
2
MMP9_HUMAN
A:
[1-160]
------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
-
S
-------
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
---
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
---
G
-
Q
G
Y
S
L
F
L
V
A
A
H
Q
F
G
H
A
L
G
L
D
H
S
S
V
P
E
A
L
M
Y
P
M
Y
R
-
F
T
--
E
G
P
P
L
H
K
D
D
V
N
G
I
R
H
L
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
95
HHSearch
46.23
55%
-89
- C3 -
1I76
1
MMP8_HUMAN
A:
[1-163]
----------------------------------------------------------------------------------------------------
M
L
T
P
G
N
P
K
W
E
R
T
N
L
T
Y
R
I
R
N
Y
T
P
Q
L
S
E
A
E
V
E
R
A
I
K
D
A
F
E
L
W
S
V
A
S
P
L
I
F
T
R
I
S
-
Q
-------
G
E
A
D
I
N
I
A
F
Y
Q
R
D
H
G
D
N
S
P
F
D
G
P
N
G
I
L
A
H
A
F
Q
P
G
Q
---
G
I
G
G
D
A
H
F
D
A
E
E
T
W
T
N
-
T
---
S
-
A
N
Y
N
L
F
L
V
A
A
H
E
F
G
H
S
L
G
L
A
H
S
S
D
P
G
A
L
M
Y
P
N
Y
A
-
F
R
E
T
S
N
Y
S
L
P
Q
D
D
I
D
G
I
Q
A
I
Y
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
99
HHSearch
45.90
51%
-89
- C3 -
1RM8
1
MMP16_HUMAN
A:
[2-169]
----------------------------------------------------------------------------------------------------------
Q
K
W
Q
H
K
H
I
T
Y
S
I
K
N
V
T
P
K
V
G
D
P
E
T
R
K
A
I
R
R
A
F
D
V
W
Q
N
V
T
P
L
T
F
E
E
V
P
-
Y
SELENGK
R
D
V
D
I
T
I
I
F
A
S
G
F
H
G
D
S
S
P
F
D
G
E
G
G
F
L
A
H
A
Y
F
P
G
P
---
G
I
G
G
D
T
H
F
D
S
D
E
P
W
T
L
-
G
NPN
H
-
D
G
N
D
L
F
L
V
A
V
H
E
L
G
H
A
L
G
L
E
H
S
N
D
P
T
A
I
M
A
P
F
Y
Q
-
Y
M
E
T
D
N
F
K
L
P
N
D
D
L
Q
G
I
Q
K
I
Y
G
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
104
HHSearch
40.90
43%
-85
- C3 -
4IN9
6
?
A:
[5-165]
---------------------------------------------------------------------------------------------------------
G
S
K
W
N
K
T
T
L
K
Y
Y
I
Y
N
----
L
T
T
T
E
R
E
N
A
I
R
S
A
F
A
L
W
S
D
K
S
T
L
S
F
I
Q
V
Y
N
P
-------
N
Q
A
D
I
K
I
K
W
E
K
G
N
H
G
D
G
Y
P
F
D
G
N
T
G
I
L
A
H
A
F
Y
P
P
P
AGG
N
Y
A
G
H
L
H
F
D
D
D
E
N
W
S
I
-
N
---
G
-
S
G
I
D
L
I
T
V
A
A
H
E
I
G
H
L
L
G
I
E
H
S
N
V
S
S
A
L
M
Y
P
Y
Y
T
G
I
K
R
----
Q
L
D
N
D
D
C
L
A
V
W
D
L
Y
G
Y
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------