@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
Templates Information:
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF01471_MMP8_H: (2014-09-24 )
MFSLKTLPFLLLLHVQISKAFPVSSKEKNTKTVQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCGVPDSGGFMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSNPIQPTGPSTPKPCDPSLTFDAITTLRGEILFFKDRYFWRRHPQLQRVEMNFISLFWPSLPTGIQAAYEDFDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPSSVQAIDAAVFYRSKTYFFVNDQFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVFQQEHFFHVFSGPRYYAFDLIAQRVTRVARGNKWLNCRYG

Atome Classification :

(27 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150-.-------......160.......170.......180......---.190.......200..-.---....210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360...-....370.......380.--.--.--....390.......400.......410.......420.......430.......440.......450.......460.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MFSLKTLPFLLLLHVQISKAFPVSSKEKNTKTVQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCGVPDSGGFMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSNPIQPTGPSTPKPCDPSLTFDAITTLRGEILFFKDRYFWRRHPQLQRVEMNFISLFWPSLPTGIQAAYEDFDRDLIFLFKGNQYWALSGYDILQGYPKDI-SNYGFPSSVQAIDAAVFY--R--S--KTYFFVNDQFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVFQQEHFFHVFSGPRYYAFDLIAQRVTRVARGNKWLNCRYG
2 PsiBlast_PDB 88.1761%-120 - C1 -1FBL MMP1_PIG A:[1-367] --------------------------------------------------------------------------------------------------FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS-E-------GQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGP---GIGGDAHFDEDERWTK-N---FRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQDDIDGIQAIYGPSENPVQPSGPQTPQVCDSKLTFDAITTLRGELMFFKDRFYMRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFE--EDTG--KTYFFVAHECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVDAVFQKDGFLYFFHGTRQYQFDFKTKRILTLQKANSWFNC---
44 HHSearch 84.5252%-122 - C1 -4FVL ? A:[1-368] --------------------------------------------------------------------------------------------------YNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-D-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWTS-S---SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKI-SELGLPKEVKKISAAVHFEDT--G--KTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC---
7 PsiBlast_PDB 83.8852%-119 - C1 -4G0D MMP13_HUMAN A:[5-368] ------------------------------------------------------------------------------------------------------PRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH-D-------GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGP---NYGGDAHFDDDETWTS-S---SKGYNLFLVAAHAFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGYDILEGYPKKI-SELGLPKEVKKISAAVHF--E--DTGKTLLFSGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPANSILWC---
10 PsiBlast_PDB 58.07100% -97 - C1 -1KBC MMP8_HUMAN A:[1-164] --------------------------------------------------------------------------------------------------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 57.82100% -96 - C1 -1KBC MMP8_HUMAN B:[1-164] --------------------------------------------------------------------------------------------------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 57.70100% -97 - C1 -1BZS MMP8_HUMAN A:[1-164] --------------------------------------------------------------------------------------------------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58 HHSearch 57.57100% -96 - C1 -1I76 MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 57.56100% -98 - C1 -1I73 MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 57.48100% -99 - C1 -3DPF MMP8_HUMAN B:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 57.19100% -99 - C1 -3DNG MMP8_HUMAN B:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 57.19100% -98 - C1 -3DNG MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 56.60100% -96 - C1 -1ZP5 MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 56.59100% -93 - C1 -3DPE MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 56.58100% -93 - C1 -3DPF MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 56.58100% -96 - C1 -1ZVX MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 56.21100% -92 - C1 -1ZS0 MMP8_HUMAN A:[1-163] ---------------------------------------------------------------------------------------------------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 PsiBlast_CBE 55.16100% -93 - C1 -1A86 MMP8_HUMAN A:[1-158] --------------------------------------------------------------------------------------------------------NPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 55.10100% -93 - C1 -1JAP MMP8_HUMAN A:[7-163] ---------------------------------------------------------------------------------------------------------PKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 55.05100% -94 - C1 -2OY2 MMP8_HUMAN A:[2-158] ---------------------------------------------------------------------------------------------------------PKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 54.74100% -93 - C1 -2OY2 MMP8_HUMAN F:[2-158] ---------------------------------------------------------------------------------------------------------PKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 54.67100% -92 - C1 -3TT4 MMP8_HUMAN A:[1-159] -------------------------------------------------------------------------------------------------------GNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 PsiBlast_CBE 54.53100% -94 - C1 -1JH1 MMP8_HUMAN A:[1-158] --------------------------------------------------------------------------------------------------------NPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRIS-Q-------GEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 53.9698% -90 - C1 -1MNC MMP8_HUMAN A:[5-162] --------------------------------------------------------------------------------------------------------GPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTGIS-Q-------GEADINIAFYQRDHGDGSPFDGPNGILAHAFQPGQ---GIGGDAHFDAEETWTN-T---SANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
65 HHSearch 48.0154% -90 - C1 -3AYU MMP2_HUMAN A:[1-166] --------------------------------------------------------------------------------------------------YNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIH-D-------GEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGT---GVGGDSHFDDDELWTL-GK--GVGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTYTK--NFRLSQDDIKGIQELYGASP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
63 HHSearch 45.4953% -84 * C1 *4H1Q MMP9_HUMAN A:[1-160] -----------------------------------------------------------------------------------------------------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVY-S-------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGP---GIQGDAHFDDDELWSLGK---GQGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRFT--EGPPLHKDDVNGIRHLYG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60 HHSearch 45.2051% -86 - C1 -1RM8 MMP16_HUMAN A:[2-169] ---------------------------------------------------------------------------------------------------------QKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVP-YSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP---GIGGDTHFDSDEPWTL-GNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
67 HHSearch 39.3343% -74 - C1 -4IN9 ? A:[4-165] -------------------------------------------------------------------------------------------------------QGSKWNKTTLKYYIYN----LTTTERENAIRSAFALWSDKSTLSFIQVYNP-------NQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSI-N---GSGIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIKR---QLDNDDCLAVWDLYGYP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------