@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF02375_KDM4E_: (2014-09-29 )
MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQMYDDIEDILIATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSHPGNPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQ

Atome Classification :

(24 SA) .........10........20........30........40........50.......----.60.--.-......70........80-........-.-90........100......--.110.-------------------...------....120......----.130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.....-------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKSVHSSPQNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQ----MYDD--I-EDILIATPLQQVTSGQG--GVFTQYHK-K-KKAMRVGQYRRLANSKKYQ--TPP-H-------------------QNF------ADLEQRYWKSHPG----NPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGESTVTFSMDPFVRIVQPESYELWKHRQ-------------------
21 PsiBlast_CBE 97.50100%-110 - C3 -2W2I KDM4E_HUMAN C:[35-357] ------------HTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQ----MYDD--I-EDILIATPLQQVTSGQG--GVFTQYHK-K-KKAMRVGQYRRLANSKKYQ--TPP-H-------------------QNF------ADLEQRYWKSHPG----NPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMA---------VTFSMDPFVRIVQPESYELWKH---------------------
22 PsiBlast_CBE 97.21100%-111 - C3 -2W2I KDM4E_HUMAN B:[35-357] ------------HTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQ----MYDD--I-EDILIATPLQQVTSGQG--GVFTQYHK-K-KKAMRVGQYRRLANSKKYQ--TPP-H-------------------QNF------ADLEQRYWKSHPG----NPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPD--------LRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMA---------VTFSMDPFVRIVQPESYELWKH---------------------
1 PsiBlast_PDB 96.76100%-112 - C3 -2W2I KDM4E_HUMAN A:[35-352] ------------HTIMTFYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWKARQ----MYDD--I-EDILIATPLQQVTSGQG--GVFTQYHK-K-KKAMRVGQYRRLANSKKYQ--TPP-H-------------------QNF------ADLEQRYWKSHPG----NPPIYGADISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDIS----AFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMA---------VTFSMDPFVRIVQPESY--------------------------
4 PsiBlast_PDB 96.4084%-104 - C3 -4HON KDM4D_HUMAN A:[1-329] --------QNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARE----TYDN--I-SEILIATPLQQVASGRA--GVFTQYHK-K-KKAMTVGEYRHLANSKKYQ--TPP-H-------------------QNF------EDLERKYWKNRIY----NSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQ-------------------
23 PsiBlast_CBE 96.1684%-105 - C3 -4HON KDM4D_HUMAN B:[1-329] --------QNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARE----TYDN--I-SEILIATPLQQVASGRA--GVFTQYHK-K-KKAMTVGEYRHLANSKKYQ--TPP-H-------------------QNF------EDLERKYWKNRIY----NSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQ-------------------
3 PsiBlast_PDB 93.5984% -96 - C3 -3DXU KDM4D_HUMAN A:[4-333] -------AQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARE----TYDN--I-SEILIATPLQQVASGRA--GVFTQYHK-K-KKAMTVGEYRHLANSKKYQ--TPP-H-------------------QNF------EDLERKYWKNRIY----NSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQ-------------------
34 HHSearch 92.9383% -97 - C3 -3DXT KDM4D_HUMAN A:[11-340] -------AQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARE----TYDN--I-SEILIATPLQQVASGRA--GVFTQYHK-K-KKAMTVGEYRHLANSKKYQ--TPP-H-------------------QNF------EDLERKYWKNRIY----NSPIYGADISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQ-------------------
25 Fugue 92.1365%-100 - C3 -2GP5 KDM4A_HUMAN A:[1-347] --ASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTLPTP-------
24 Fugue 91.5366% -99 - C3 -2OX0 KDM4A_HUMAN A:[29-377] -------TLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDNTVIDHTLPTPEAAEFLK
19 PsiBlast_PDB 91.4966% -99 - C3 -3RVH KDM4A_HUMAN A:[27-355] -----SETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
20 PsiBlast_PDB 91.2966% -99 - C3 -4GD4 KDM4A_HUMAN A:[27-355] -----SETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
16 PsiBlast_PDB 91.2366% -99 - C3 -3PDQ KDM4A_HUMAN A:[27-355] -----SETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
12 PsiBlast_PDB 91.0266% -97 - C3 -2VD7 KDM4A_HUMAN A:[28-355] ------ETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
6 PsiBlast_PDB 90.8967%-104 - C3 -2XML KDM4C_HUMAN A:[11-337] --------LNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQ----CYDD--I-DNLLIPAPIQQMVTGQS--GLFTQYNI-Q-KKAMTVKEFRQLANSGKYC--TPR-Y-------------------LDY------EDLERKYWKNLTF----VAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKLCTCRKDMVKISMDIFVRKFQPDRYQLWKQ---------------------
18 PsiBlast_PDB 90.8466% -97 - C3 -3U4S KDM4A_HUMAN A:[30-355] --------LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
9 PsiBlast_PDB 90.8166% -99 - C3 -2OS2 KDM4A_HUMAN A:[30-355] --------LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
17 PsiBlast_PDB 90.6066% -99 - C3 -2YBK KDM4A_HUMAN A:[29-355] -------TLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
10 PsiBlast_PDB 90.4366% -97 - C3 -2OT7 KDM4A_HUMAN A:[29-355] -------TLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
14 PsiBlast_PDB 90.4166% -99 - C3 -2YBP KDM4A_HUMAN A:[29-355] -------TLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
15 PsiBlast_PDB 90.3566%-102 - C3 -2YBS KDM4A_HUMAN A:[30-355] --------LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
7 PsiBlast_PDB 90.3366% -98 - C3 -2OQ6 KDM4A_HUMAN A:[30-355] --------LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
13 PsiBlast_PDB 89.7566%-103 - C3 -3NJY KDM4A_HUMAN A:[30-355] --------LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRA----SYDD--I-DDLVIPAPIQQLVTGQS--GLFTQYNI-Q-KKAMTVREFRKIANSDKYC--TPR-Y-------------------SEF------EELERKYWKNLTF----NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWK----------------------
36 HHSearch 72.7642% -89 - C3 -3OPT RPH1_YEAST A:[7-341] -------PSEIVGGVPVFKPTYEQFEDFYAYCKAINKYGM-KSGVVKVIPPKEWKDKLDLPYSAET--L-QKIKIKSPIQQHISGNK--GLFMVQNV-EKNKTYNIIQWKDLSKD--YV--PPED-SSFNIDDFEQFRTEYTIDLSDFQNTERLKFLEEYYWKTLNF----TTPMYGADTPGSIFPEGLNVWNVAKLP------------------DSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALE-------------------------------------------------------------
37 HHSearch 67.5735% -84 - C3 -4IGQ ? A:[14-360] ------------DEAPVFYPTEEEFEDTLKYIESIRPM-AEPYGICRIVPPSSWKP---------DKSIWEGSKFSTRVQKVDKLQNRK-----FGFEP-GPEFTLQTFQKYADDFSKQYF----V-------------------PSV------EDIEGEYWRIVEVPTEEIEVIYGADLETG----AQSGWNLNNLPRL---------------LVPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKHLPELFEEQPDLLHNLVTQFSPSLLKSEGVHVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVA---------------------------------------------------------------