@TOME V2.3
(Nov 2016)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PF04886_MMP9_MOUSE: (2014-10-09 )
MSPWQPLLLALLAFGCSSAAPYQRQPTFVVFPKDLKTSNLTDTQLAEAYLYRYGYTRAAQMMGEKQSLRPALLMLQKQLSLPQTGELDSQTLKAIRTPRCGVPDVGRFQTFKGLKWDHHNITYWIQNYSEDLPRDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGAGVQGDAHFDDDELWSLGKGVVIPTYYGNSNGAPCHFPFTFEGRSYSACTTDGRNDGTPWCSTTADYDKDGKFGFCPSERLYTEHGNGEGKPCVFPFIFEGRSYSACTTKGRSDGYRWCATTANYDQDKLYGFCPTRVDATVVGGNSAGELCVFPFVFLGKQYSSCTSDGRRDGRLWCATTSNFDTDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPLYSYLEGFPLNKDDIDGIQYLYGRGSKPDPRPPATTTTEPQPTAPPTMCPTIPPTAYPTVGPTVGPTGAPSPGPTSSPSPGPTGAPSPGPTAPPTAGSSEASTESLSPADNPCNVDVFDAIAEIQGALHFFKDGWYWKFLNHRGSPLQGPFLTARTWPALPATLDSAFEDPQTKRVFFFSGRQMWVYTGKTVLGPRSLDKLGLGPEVTHVSGLLPRRLGKALLFSKGRVWRFDLKSQKVDPQSVIRVDKEFSGVPWNSHDIFQYQDKAYFCHGKFFWRVSFQNEVNKVDHEVNQVDDVGYVTYDLLQCP
Atome Classification :
(24 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.-......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MS
P
W
Q
P
L
L
L
A
L
L
A
F
GCSSAAPYQRQ
P
T
F
V
V
FPKDLKTSNL
T
D
T
Q
L
A
E
A
Y
L
Y
RYG
Y
T
R
A
A
Q
M
MGEKQSL
R
P
A
L
L
M
L
Q
K
Q
LSLPQTGE
L
D
S
Q
T
L
K
A
IRTPRCGVPDVGR
F
Q
TFKG-
L
K
W
DHH
N
I
T
Y
W
I
Q
N
YSEDL
P
R
D
M
I
D
D
A
F
A
R
A
F
A
V
WGEVA
P
L
T
F
T
R
VYGPEA
D
I
V
I
Q
FGVAEHGDGYPFDGKDG
L
L
A
HAFPPGAGVQGDAHF
D
D
D
E
L
W
SLGK
G
V
V
I
P
T
Y
YGNSNGA
P
C
H
F
P
F
T
FEGR
S
Y
S
A
CTTDGRNDGTPWCSTTADYDKDGKFGFCPSERLYTEHGNGEGK
P
C
V
F
P
F
I
FEGRSY
S
A
CTTKGRSDG
Y
R
W
C
A
TTANYDQD
K
L
Y
GFCPTR
V
D
A
T
V
VGGNSAG
E
L
C
V
F
P
F
V
F
LG
K
Q
Y
S
SCTSDGRRDG
R
L
W
C
A
TTSNFDTDKKWGFCPDQG
Y
S
L
F
L
V
A
A
H
EF
G
H
ALGLDHSSV
P
E
A
L
M
Y
P
L
Y
S
Y
L
EGFPLNKDDID
G
I
Q
Y
L
Y
GRGSKPDPRPPATTTTEPQPTAPPTMCPTIPPTAYPTVGPTVGPTGAPSPGPTSSPSPGPTGAPSPGPTAPPTAGSSEASTESLSPADNPCN
V
D
V
F
D
A
I
A
E
I
Q
G
A
L
H
F
FKD
G
W
Y
W
K
FLNHRGSPLQG
P
F
LTARTWPAL
P
A
T
L
D
S
AFEDPQ
T
K
R
V
F
F
FSG
R
Q
M
W
V
YTGKTVLGPR
S
L
D
KLGLGPE
V
T
H
V
S
G
L
L
P
R
R
L
G
K
A
L
LFSKG
R
V
W
R
F
DLKSQKV
D
P
Q
S
V
I
R
V
DKEFSGVPWNSHDI
F
Q
YQD
K
A
Y
F
CH
G
K
F
F
W
R
V
SFQN
E
V
N
K
V
D
H
E
V
NQVDD
V
G
Y
V
T
Y
D
L
LQCP
12
PsiBlast_PDB
19.10
86%
-88
- C1 -
2OW0
1
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
19.01
87%
-88
- C1 -
1GKC
1
MMP9_HUMAN
A:
[5-110]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
17.93
86%
-84
- C1 -
2OVZ
1
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
PsiBlast_CBE
17.15
86%
-83
- C1 -
4HMA
1
B:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
16.85
87%
-80
- C1 -
4H2E
5
MMP9_HUMAN
A:
[2-111]
-----------------------------------------------------------------------------------------------------------
F
Q
T
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
16.69
86%
-80
- C1 -
2OW1
1
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
16.48
86%
-81
- C1 -
2OW1
1
B:
[5-106]
------------------------------------------------------------------------------------------------------------------
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
16.28
87%
-82
- C1 -
1GKC
1
MMP9_HUMAN
B:
[8-110]
-----------------------------------------------------------------------------------------------------------------D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
15.90
87%
-77
- C1 -
4H3X
2
MMP9_HUMAN
B:
[2-111]
-----------------------------------------------------------------------------------------------------------
F
Q
T
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
PsiBlast_CBE
15.84
86%
-81
- C1 -
4H82
1
MMP9_HUMAN
B:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
PsiBlast_CBE
15.76
86%
-78
- C1 -
4H1Q
1
B:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
15.62
86%
-80
- C1 -
2OW2
1
MMP9_HUMAN
A:
[4-106]
-----------------------------------------------------------------------------------------------------------------D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
15.60
87%
-78
- C1 -
1GKD
2
MMP9_HUMAN
A:
[5-110]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
15.36
86%
-78
- C1 -
4H1Q
1
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
15.31
87%
-80
- C1 -
1GKD
2
MMP9_HUMAN
B:
[9-110]
------------------------------------------------------------------------------------------------------------------
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
15.26
87%
-76
- C1 -
4H3X
5
MMP9_HUMAN
A:
[2-111]
-----------------------------------------------------------------------------------------------------------
F
Q
T
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
PsiBlast_CBE
14.79
86%
-77
* C1 *
2OVZ
1
B:
[5-106]
------------------------------------------------------------------------------------------------------------------
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
14.60
86%
-78
- C1 -
2OW2
1
B:
[5-106]
------------------------------------------------------------------------------------------------------------------
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
14.33
86%
-75
- C1 -
2OW0
1
B:
[5-106]
------------------------------------------------------------------------------------------------------------------
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
14.13
87%
-73
- C1 -
4H2E
5
MMP9_HUMAN
B:
[2-111]
-----------------------------------------------------------------------------------------------------------
F
Q
T
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
14.10
86%
-73
- C1 -
4H82
1
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
13.74
86%
-73
- C1 -
4HMA
9
MMP9_HUMAN
A:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
PsiBlast_CBE
13.44
86%
-73
- C1 -
4H82
3
MMP9_HUMAN
C:
[1-106]
--------------------------------------------------------------------------------------------------------------
F
E
G
D
L
K
W
H
H
H
N
I
T
Y
W
I
Q
N
Y
S
E
D
L
P
R
A
V
I
D
D
A
F
A
R
A
F
A
L
W
S
A
V
T
P
L
T
F
T
R
V
Y
S
R
D
A
D
I
V
I
Q
F
G
V
A
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
P
P
G
P
G
I
Q
G
D
A
H
F
D
D
D
E
L
W
S
L
G
K
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
9.49
68%
-68
- C1 -
3AYU
1
A:
[9-110]
-------------------------------------------------------------------------------------------------------------------
K
W
D
K
N
Q
I
T
Y
R
I
I
G
Y
T
P
D
L
D
P
E
T
V
D
D
A
F
A
R
A
F
Q
V
W
S
D
V
T
P
L
R
F
S
R
I
H
D
G
E
A
D
I
M
I
N
F
G
R
W
E
H
G
D
G
Y
P
F
D
G
K
D
G
L
L
A
H
A
F
A
P
G
T
G
V
G
G
D
S
H
F
D
D
D
E
L
W
T
L
G
K
G
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------