@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00105_NR2C2_HUMAN: (2016-03-19 )
MTSPSPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIVTAVDASGSPKQQFILTSPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLRSPLIATPTFVADKDGARQTGLLDPGMLVNIQQPLIREDGTVLLATDSKAETSQGALGTLANVVTSLANLSESLNNGDTSEIQPEDQSASEITRAFDTLAKALNTTDSSSSPSLADGIDTSGGGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIGNVSIDSIIPYILKMETAEYNGQITGASL

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110..--.....120.......130.......140.......150.........160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440...-....450......---------.460..--.--.....-.470........480.......490.......500--...--..---.-------.510.......520.......530.---.---.--....--540.......550.......560...-....570.......580.......590....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTSPSPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIVTAVDASGSPKQQFILTSPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKTDVQRPQVV--EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLT--YSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLRSPLIATPTFVADKDGARQTGLLDPGMLVNIQQPLIREDGTVLLATDSKAETSQGALGTLANVVTSLANLSESLNNGDTSEIQPEDQSASEITRAFDTLAKALNTTDSSSSPSLADGIDTSGGGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA-AIVNHLQNSIQED---------KL--SG--D--RIKQV-ME-HIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFS--PDH--PG---L-------TSTSQIEKFQEKAQMELQDYVQKTY---S---E--DTYR--LARILVRLPALRLMSSNITEELFFTG-LIGNVSIDSIIPYILKMETAEYNGQITGASL
51 Fugue 90.0428% -75 - C3 -4NQA NR1H2_HUMAN I:[5-389] ----------------------------------------------------------------------------------------------------------KGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQI---------------RKKKIRKQQQQE------------------------------------------SQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSD-----------------QPKVTP-----WPLGADPQ--------SRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL-KDFTYSKDDFHRA---------GL--Q------------VE-FINPIFEFSRAMRRLGLDDAEYALLIAINIFS--ADR--PN---V-------QEPGRVEALQQPYVEALLSYTRIKR---P---Q--DQLR--FPRMLMKLVSLRTLSSVHSEQVFALR-LQDK-KLPPLLSEIWDV--------------
19 PsiBlast_PDB 75.0834%-118 - C3 -1Z5X - ? U:[69-257] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICQAADRQLYQLIEWAKHIPHFTELPVEDQVILLKSGWNELLIAGFSHRSMSVKDGIMLATGLVVH-RNCAHQA---------GV--GAIFD--RV-----------LTELVAKMREMKMDKTELGCLRSIVLFN--PEA--KG---L-------KSTQQVENLREKVYAILEEYCRQTY---P---D--QSGR--FAKLLLRLPALRSIGLKCLEHLFFFK-LVGNTSIDSFLLSMLE---------------
17 PsiBlast_PDB 73.8935%-109 - C3 -4XAJ - MALE_ECO57 (first) A:[378-569] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLA-V------SGMNGD---------NT--DS--Q--RLTLI-IS-EIQALQEVVARFRQLRLDATEFACLKCIVTFKAVP------LRSF-------RNAAAIAALQDEAQLTLNSYIHTRY---P---T--QPVR--FGKLLLLLPALRSISPSTIEEVFFKK-TIGNVPITRLL--------------------
1 PsiBlast_PDB 73.7838%-122 - C3 -3CJW - COT2_HUMAN A:[207-396] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAP---------------------------------------VAF-MD-HIRIFQEQVEKLKALHVDSAEYSCLKAIVLFT--SDA--CG---L-------SDVAHVESLQEKSQCALEEYVRSQY---P---N--QPTR--FGKLLLRLPSLRTVSSSVIEQLFFVR-LVGKTPIETLI--------------------
18 PsiBlast_PDB 71.2134%-105 - C3 -1XIU RXR_BIOGL A:[36-224] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICQAADKQLFTLVEWAKRIPHFTELPLEDQVILLRAGWNELLIAGFSHRS-IMAKDGILL-ATGLHVHRSSAHQ---------AG--VG--T--IFDRV--------LTELVAKMRDMKMDKTELGCLRAVVLFN--PDA--KG---L-------TAVQEVEQLREKVYASLEEYTKSRY---P---E--EPGR--FAKLLLRLPALRSIGLKCLEHLFFFK-LIGDQPIDTFLMEMLE---------------
20 PsiBlast_PDB 70.6833% -98 - C3 -1LBD - RXRA_HUMAN A:[268-462] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA-TGLHVHRNSAHSA---------GV--GAIFD--RV-----------LTELVSKMRDMQMDKTELGCLRAIVLFN--PDS--KG---L-------SNPAEVEALREKVYASLEAYCKHKY---P---E--QPGR--FAKLLLRLPALRSIGLKCLEHLFFFK-LIGDTPIDTFL-----MEMLEAPHQMT----
49 HHSearch 69.8330%-107 - C3 -2NXX - ? A:[35-231] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQA-QDAIVL-ATGLTVN--KSTA---------H----------AVG-V-GNIYDRVLSELVNKMKEMKMDKTELGCLRAIILYN--PDV--RG---I-------KSVQEVEMLREKIYGVLEEYTRTTH---P---N--EPGR--FAKLLLRLPALRSIGLKCLEHLFFFK-LIGDVPIDTF---LMEMLEG-----------
46 HHSearch 68.1232%-118 - C3 -3F5C - NR0B1_MOUSE B:[251-470] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDPQVVCEAASAGLLKTLRFVKYLPCFQILPLDQQLVLVRSCWAPLLMLELAQDHLHFEMMEI--------------------------------------HLLPAA-AVQAIKSFFFKCWSLNIDTKEYAYLKGTVLFN--PDL--PG---L-------QCVKYIEGLQWRTQQILTEHIRMMQ---R---E--YQIR--SAELNSALFLLRFINSDVVTELFFRP-IIGAVSMDDM---MLEMLCA-----------
24 HHSearch 65.3334% -84 - C3 -1LBD - RXRA_HUMAN A:[262-458] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAV-KDGILL-ATGLHVH--RNSA---------H----------SAGVG-AI-FDRVLTELVSKMRDMQMDKTELGCLRAIVLFN--PDS--KG---L-------SNPAEVEALREKVYASLEAYCKHKY---P---E--QPGR--FAKLLLRLPALRSIGLKCLEHLFFFK-LIGDTPIDTF---LMEMLEAP----------
45 HHSearch 64.9724%-111 - C3 -1PDU - HR38_DROME A:[350-547] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARID-DTKLIF-CNGTVLH--RTQ---------------------CLRSF-GE-WLNDIMEFSRSLHNLEIDISAFACLCALTLIT--E-R--HG---L-------REPKKVEQLQMKIIGSLRDHVTYNA---EAQ-K--KQHY--FSRLLGKLPELRSLSVQGLQRIFYLK-LEDLVPAPAL---IENMFVT-----------
28 HHSearch 63.8823% -99 - C3 -2E2R ERR3_HUMAN A:[41-241] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPDSDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSF-EDELVY-ADDYIMD--EDQS--------------------KLAGL-LD-LNNAILQLVKKYKSMKLEKEEFVTLKAIALAN--SDS--MH---I-------EDVEAVQKLQDVLHEALQDYEAGQH---M---E--DPRR--AGKMLMTLPLLRQTSTKAVQHFYNIK-LEGKVPMHKL---FLEMLEA-----------
55 Fugue 63.7515% -81 - C3 -1BSX THB_HUMAN A:[10-260] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPKVDLEAFSHFT-KIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAV-----RYDPESE-TLTLNGEMAVTRG---------QL--KN--G--GLGVV-SD-AIF---DLGMSLSSFNLDDTEVALLQAVLLMS--SDR--PG---L-------ACVERIEKYQDSFLLAFEHYINYRK---H---H--VTHF--WPKLLMKVTDLRMIGACHASRFLHMK-VE--CPTELFPPLFLEVFED-----------
47 HHSearch 63.3019%-103 * C3 *3B0T VDR_HUMAN A:[54-254] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNE-SFTMDDMSWTC-GNQDYKYR-VSD-----------V------T--KAGHS-LE-LIEPLIKFQVGLKKLNLHEEEHVLLMAICIVS--PDR--PG---V-------QDAALIEAIQDRLSNTLQTYIRCRH---P---PPGSHLL--YAKMIQKLADLRSLNEEHSKQYRCLS-FQPECSM-KLTPLVLEVFG------------
36 HHSearch 63.2826% -96 - C3 -1HG4 USP_DROME A:[45-271] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSIVSL--------------------QPQQLFLNQSFSYHR--NSAIKAGV-SAIFDRILSELSVKMKRLNLDRRELSCLKAIILYN--PDI--RG---I-------KSRAEIEMCREKVYACLDEHCRLEH---P---G--DDGR--FAQLLLRLPALRSISLKCQDHLFLFR-ITSDRPLEEL---FLEQLEAPPP--------
53 Fugue 63.0116% -73 - C3 -1SKX NR1I2_HUMAN A:[25-313] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTEEQRMMIRELMDAQMKTFDT-TFSHFKNFRLPGVKVSLQLRGEDGSVWNYKPPIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNT--------------VFNAETGTWEC---------------G--R--LSYCL-EL-LLEPMLKFHYMLKKLQLHEEEYVLMQAISLFS--PDR--PG---V-------LQHRVVDQLQEQFAITLKSYIECNR---P---Q--PAHRFLFLKIMAMLTELRSINAQHTQRLLRIQ-DIHP----FATPLMQELFGI-----------
35 HHSearch 62.9121%-108 - C3 -1OVL - NR4A2_HUMAN A:[72-267] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPV-EGKLIF-CNGVVLH--RLQ---------------------CVRGF-GE-WIDSIVEFSSNLQNMNIDISAFSCIAALAMVT---ER--HG---L-------KEPKRVEELQNKIVNCLKDHVTFNN---GGL-N--RPNY--LSKLLGKLPELRTLCTQGLQRIFYLK-LEDLVPPPAI---IDKLFLD-----------
37 HHSearch 62.3118%-108 - C3 -3U9Q - PPARG_HUMAN A:[278-475] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMN---KDGVLI-SEGQGFMT-REF-----------L--K---S--LRKPF-GD-FMEPKFEFAVKFNALELDDSDLAIFIAVIILS--GDR--PG---L-------LNVKPIEDIQDNLLQALELQLKLNH---P---E--SSQL--FAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPL---LQEIYKD-----------
44 HHSearch 62.2818% -96 - C3 -1FCY RARG_HUMAN A:[42-236] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPE-QDTMTF-SDGLTLN--RTQM---------H----------NAG-F-GP-LTDLVFAFAGQLLPLEMDDTETGLLSAICLIC--GDR--MD---L-------EEPEKVDKLQEPLLEALRLYARRRR---P---S--QPYM--FPRMLMKITDLRGISTKGAERAITLK-MEIPGPMPPL---IREMLE------------
33 HHSearch 61.6923% -93 - C3 -2OCF A:[38-250] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPFSEASMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEH-PGKLLF-APNLLLD--RNQG---------K----------CVEGM-VE-IFDMLLATSSRFRMMNLQGEEFVCLKSIILLN--SGVYT---------------KDHIHRVLDKITDTLIHLMAKAGLTLQ---Q--QHQR--LAQLLLILSHIRHMSNKGMEHLYSMK-CKNVVPLSDL---LLEMLDAH----------
30 HHSearch 61.6622%-100 - C3 -1L2J ESR2_HUMAN A:[56-265] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEASMMMSLTKLADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDH-PGKLIF-APDLVLD--RDEG---------K----------CVEGI-LE-IFDMLLATTSRFRELKLQHKEYLCVKAMILLN--S---------LVTATQDADSSRKLAHLLNAVTDALVWVIAKSG---ISSQQ--QSMR--LANLLMLLSHVRHASNKGMEHLLNMK-CKNVVPVYDL---LLEMLNAHV---------