@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PF00105_NR4A2_HUMAN: (2016-03-19 )
MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250......-.260.......270.......280.......290...--....300.......310.......320.......330....-...340.......350.......360.------------------------------------......370.......380-........390.......400.......410.......420.......430.......440.......450.......460.......470--...-....480.....-..490.......500.......510.-.-.....520.......530.......540.......550.......560.......570.......580.......590......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSFSTFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQSPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHASQLLDTQVPSPPSRGSPS-NEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNA--KYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTD-SLKGRRGRLPSKPKSPQEPSPPSPPVS------------------------------------LISALVRAHVDSNPAMTS--LDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHR--LQC-VRGFGEWIDSIV-EFSSNLQNMNIDISAFSCIAALAMVT-E-RHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF
23 HHSearch 92.92100%-143 - C2 -1OVL - NR4A2_HUMAN A:[36-271] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------LISALVRAHVDSNPAMTS--LDYSRFQAN--------DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHR--LQC-VRGFGEWIDSIV-EFSSNLQNMNIDISAFSCIAALAMVT-E-RHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF
1 PsiBlast_PDB 92.7199%-143 - C2 -1OVL - NR4A2_HUMAN A:[36-271] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------LISALVRAHVDSNPAMTS--LDYSRFQAN--------DTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHR--LQC-VRGFGEWIDSIV-EFSSNLQNMNIDISAFSCIAALAMVT-E-RHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF
8 PsiBlast_PDB 82.9865%-134 - C2 -4REE ? B:[12-248] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPH--KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAGEP--ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
12 PsiBlast_PDB 82.6964%-134 - C2 -4RZF B:[11-248] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLEWAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVA------SCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
7 PsiBlast_PDB 82.4765%-131 - C2 -4RZG B:[11-248] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLP-FGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAGEP--ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
13 PsiBlast_PDB 82.2064%-138 - C2 -4RZE B:[12-248] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVL----KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDWLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAG----ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMETLPF
3 PsiBlast_PDB 82.2065%-132 - C2 -3V3E B:[12-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQ-ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
4 PsiBlast_PDB 81.9765%-134 - C2 -4KZI B:[12-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPH--KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAGEP--ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
6 PsiBlast_PDB 81.9465%-132 - C2 -4WHG ? B:[12-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLP---KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVA--PQ-ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
9 PsiBlast_PDB 81.3564%-133 - C2 -4KZM B:[12-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLP---KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVA-----ASCLARLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
11 PsiBlast_PDB 80.9864%-132 - C2 -4REF ? B:[11-248] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFIWRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAGE---ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
2 PsiBlast_PDB 80.7065%-128 - C2 -2QW4 - NR4A1_HUMAN A:[32-264] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPHFGKEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVAG---PASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDT---
10 PsiBlast_PDB 80.5264%-133 - C2 -4KZJ B:[13-249] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLPH---EDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFIWRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVA-----ASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
5 PsiBlast_PDB 80.2765%-130 - C2 -4WHF ? B:[12-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAN------------------------------------LLTSLVRAHLDSGPSTAK--LDYSKFQELVLP---KEDAGDVQQFYDLLSGSLEVIRKWAEKIPGFAELSPADQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQC-ARGFGDWIDSIL-AFSRSLHSLLVDVPAFACLSALVLIT-D-RHGLQEPRRVEELQNRIASCLKEHVAAVA------SCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIIDKIFMDTLPF
28 HHSearch 80.2261%-129 - C2 -1PDU - HR38_DROME A:[321-548] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------LITALVRSHVDTTPDPSC--LDYSHYEEQ-----SMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHR--TQC-LRSFGEWLNDIM-EFSRSLHNLEIDISAFACLCALTLIT-E-RHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTT---
14 PsiBlast_PDB 80.0159%-128 - C2 -1PDU - HR38_DROME A:[319-548] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIS------------------------------------LITALVRSHVDTTPDPSC--LDYSHYE-----EQSMSEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHR--TQC-LRSFGEWLNDIM-EFSRSLHNLEIDISAFACLCALTLIT-E-RHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTT---
46 Fugue 77.2629%-103 - C2 -4NQA NR1H2_HUMAN I:[5-389] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGPAPKMLGHE-----LCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHR-AGLQVEFINPIF-EFSRAMRRLGLDDAEYALLIAINIFS-ADRPNVQEPGRVEALQQPYVEALLSYTRIKRP--QDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDV-----
17 PsiBlast_PDB 73.7332%-106 - C2 -4NQA RXRA_HUMAN A:[31-358] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDL--TYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEE-RQRG------------SSANEDMP----------------------------------------VERILEAELAVEPKTET--Y-EANMGLNPSS--PNDPVTNICQAAD---KQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHR--NSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPD-SKGLSNPAEVEALREKVYASLEAYCKHKYP--EQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP----IDTFLMEML--
15 PsiBlast_PDB 72.6132%-119 - C2 -3DZU RXRA_HUMAN A:[137-460] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDL--TYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEE-RQR---------------ANEDMP----------------------------------------VERILEAELA-------------------------DPVTNICQAAD---KQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHR--NSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPD-SKGLSNPAEVEALREKVYASLEAYCKHKYP--EQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP----IDTFLMEML--
16 PsiBlast_PDB 71.7232%-116 - C2 -3E00 RXRA_HUMAN A:[137-460] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDL--TYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEE-RQR---------------ANEDMP----------------------------------------VERILEAELAVE-------------------------VTNICQAAD---KQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHR--NSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPD-SKGLSNPAEVEALREKVYASLEAYCKHKYP--EQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP----IDTFLMEML--