@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : trmd_haein_: (2014-06-20 )
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS

Atome Classification :

(20 SA) --.........10........20........30........40........50........60........70.......----.80---.........90........100.......110.......120....----...----130.......140.......150.......160.......170..--.....180.......190.......200.......210.......220...--...--.230.......240....----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
3 PsiBlast_PDB 99.41100%-138 - C1 -1UAL TRMD_HAEIN A:[21-266] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
18 Fugue 99.3199%-138 - C1 -1UAL TRMD_HAEIN A:[19-270] SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLS---------FADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNSLEHH
28 HHSearch 98.68100%-138 - C1 -1UAL TRMD_HAEIN A:[21-265] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHN-----
2 PsiBlast_PDB 97.99100%-136 - C1 -1UAK - TRMD_HAEIN A:[21-266] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
27 HHSearch 97.94100%-136 - C1 -4MCD TRMD_HAEIN A:[1-246] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
7 PsiBlast_PDB 97.94100%-136 - C1 -4MCD TRMD_HAEIN A:[1-246] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
8 PsiBlast_PDB 97.92100%-138 - C1 -3AXZ TRMD_HAEIN A:[21-266] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL-----------ADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
1 PsiBlast_PDB 97.74100%-135 - C1 -1UAJ - TRMD_HAEIN A:[1-246] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLG---------------LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
4 PsiBlast_PDB 97.37100%-129 - C1 -1UAM TRMD_HAEIN A:[21-266] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQA--EEDSFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHNS----
17 PsiBlast_CBE 97.32100%-128 - C1 -4MCB TRMD_HAEIN B:[1-243] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAE-------
16 PsiBlast_CBE 97.16100%-136 - C1 -4MCC TRMD_HAEIN B:[1-245] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVL------------DG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLE--GLA--LTDEQRKLLKEAQAEHN-----
9 PsiBlast_PDB 93.8383%-134 - C1 -1P9P TRMD_ECOLI A:[7-250] --MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAA----GE----GAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTE----IDE----EWSIGDYVLSGGELPAMTLIDSVSRFIPGVLG-----------EG--LLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLE--NLA--LTEEQARLLAEFKTEH------
6 PsiBlast_PDB 86.59100%-140 - C1 -4MCC TRMD_HAEIN A:[1-219] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLG---------------LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLR-----------------------------------
5 PsiBlast_PDB 86.04100%-138 - C1 -4MCB TRMD_HAEIN A:[1-219] --MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA----GE----GAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDE----EWSIGDYVLTGGELPAMTLIDAVARFIPGVLG---------------LLDCPHYTRPEVLEGLTVPPVLMS-HHEEIRKWRLKQSLQRTWLR-----------------------------------
29 HHSearch 83.5853%-131 - C1 -4H3Z TRMD_BURP8 A:[22-274] --MQFDIVTLFPDMFRALTDWGITSRAAKQERYGLRTWNPRDFTTDNYRTIDDRPYGGGPGMVMLARPLEDAINAAKAAQAEQGIG----GARVVMMSPQGATLNHDKVMRFAAEPGLILLCGRYEAIDQRLIDRV----VDE----EVSLGDFVLSGGELPAMALIDAVVRHLPGVLN------QDSFVDG--LLDCPHYTRPEEYDGVRVPDVLLGGHHAEIEQWRRREALRNTWLKRPDLIVQARKNKLLSRADEAWLASLAKDAS-----
10 PsiBlast_PDB 80.8454%-129 - C1 -4H3Y TRMD_BURP8 A:[22-261] --MQFDIVTLFPDMFRALTDWGITSRAAKQERYGLRTWNPRDFTTDNYRTIDDRPYGGGPGMVMLARPLEDAINAAKAAQ----AEQGIGGARVVMMSPQGATLNHDKVMRFAAEPGLILLCGRYEAIDQRLIDRV----VDE----EVSLGDFVLSGGELPAMALIDAVVRHLPGVLNDAQSAVQDSFVDG--LLDCPHYTRPEEYDGVRVPDVLLGGHHAEIEQWRRREALRNTWLKRPDLI--------VQARKNKLLSRA----------
11 PsiBlast_PDB 80.4854%-129 - C1 -4H3Z TRMD_BURP8 A:[22-261] --MQFDIVTLFPDMFRALTDWGITSRAAKQERYGLRTWNPRDFTTDNYRTIDDRPYGGGPGMVMLARPLEDAINAAKAAQ----AEQGIGGARVVMMSPQGATLNHDKVMRFAAEPGLILLCGRYEAIDQRLIDRV----VDE----EVSLGDFVLSGGELPAMALIDAVVRHLPGVLN------QDSFVDG--LLDCPHYTRPEEYDGVRVPDVLLGGHHAEIEQWRRREALRNTWLKRPDLI--------VQARKNKLLSRA----------
15 PsiBlast_PDB 72.7642%-134 - C1 -3QUV ? A:[5-231] --MKIDVVTIFPEYLQPVRQ-SLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICTSE-----------TLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDA----ATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN------------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL------------------------------
33 HHSearch 72.1244%-114 - C1 -3IEF - TRMD_BARHE A:[3-225] --FQARVLTLYPEMFPGFLGCSLAGQALKQGIWSLETVQIRDFA-----SVDDTPAGGGAGMVMRADVLAAALDSCP--------N----DSPRLLMSPRGRLLNQAYARSLARSSGVTLVCGRFEGVDERIIEAR----ELE----EVSIGDYILSGGETAALVLLDAIVRLLPGVMGNEISAKCESFENG--LLEHPQYTRPAVFEGRGIPPVLTSGHHKAIANWRQQQAESLTRQRRPDLYA--LY-------------------------
34 HHSearch 71.9244%-122 * C1 *3QUV ? A:[5-231] --MKIDVVTIFPEYLQP-VRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICT-------S----ETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVR----EVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN------------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL------------------------------


Add PDB User Result:

(13 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
48 -99%-118 - C1 -U048 A:[1-245] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG----------ADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-
49 -99%-118 - C1 -U049 A:[1-245] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG----------ADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-
50 -99%-113 - C1 -U050 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAENQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL---------SFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
51 -99%-119 - C1 -U051 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL------------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
52 -99%-117 - C1 -U052 A:[1-245] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-----------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-
53 -99%-119 - C1 -U053 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-----------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
54 -99%-116 - C1 -U054 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-----------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
55 -99%-110 - C1 -U055 A:[1-245] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG--------SFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-
56 -99%-113 - C1 -U056 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-----------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
57 -99% -70 - C1 -U057 A:[2-246] -WIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG--------SFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
58 -99%-111 - C1 -U058 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-------ESFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
59 -99%-109 - C1 -U059 A:[1-246] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-------DSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
60 -99%-111 - C1 -U060 A:[1-245] MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDRHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-----------DGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHN-