@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : GNRHR_HUMAN: (2016-01-09 )
MANSASPEQNQNHCSAINNSIPLMQGNLPTLTLSGKIRVTVTFFLFLLSATFNASFLLKLQKWTQKKEKGKKLSRMKLLLKHLTLANLLETLIVMPLDGMWNITVQWYAGELLCKVLSYLKLFSMYAPAFMMVVISLDRSLAITRPLALKSNSKVGQSMVGLAWILSSVFAGPQLYIFRMIHLADSSGQTKVFSQCVTHCSFSQWWHQAFYNFFTFSCLFIIPLFIMLICNAKIIFTLTRVLHQDPHELQLNQSKNNIPRARLKTLKMTVAFATSFTVCWTPYYVLGIWYWFDPEMLNRLSDPVNHFFFLFAFLNPCFDPLIYGYFSL

Atome Classification :

(20 SA) .........10........20........30........40...-.....50........60........70........80........90........100....--..--.110.......120.......130.......140......--.-150-..-......160.......--170...-----....180.---......190...-....200------..-.....210........220.......230.......240.......--------------------------------250.......260.----......270........280...--....290...--------..-----.--.300.......310-.........320......-------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MANSASPEQNQNHCSAINNSIPLMQGNLPTLTLSGKIRVTVTFF-LFLLSATFNASFLLKLQKWTQKKEKGKKLSRMKLLLKHLTLANLLETLIVMPLDGMWNITVQ--WY--AGELLCKVLSYLKLFSMYAPAFMMVVISLDRSLAITRPLA--L-KS--NS-KVGQSMVGLAWILSSV--FAGPQL-----YIFRMIHL---ADSSGQTKVFSQ-CVTHCSF------SQ-WWHQAF-YNFFTFSCLFIIPLFIMLICNAKIIFTLTRVLHQDPHEL--------------------------------QLNQSKNNIPRARL----KTLKMTV-AFATSFTVCWTPYYV--LGIWYWFDPE--------ML-----N--RLSDPVNHFFFL---FAFLNPCFDPLIYGYFSL-------------------------------------
11 PsiBlast_PDB 87.7826%-146 - C2 -4BV0 NTR1_RAT A:[19-312] -----------------------------------KVLVTAIYLALFVVGTVGNGVTLFTLAR---K-------SRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWA--FGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHP----L-MS--RS-RT-KKFISAIWLASAL--LAIPML-----F---TVGL---QNLSGDGTHPGG-LVCTPIV------DT-ATLKVV-IQLNTFMS-FLFPMLVASILNTVIARRLTVMVH-------------------------------------------PGRVQALRR----GVLVLR--AMVIAFVVCWLPYHVRRLMFVYISDEQ--------WT-----T--ALFDFYHYFYMLSNALVYVSAAINPILYNLVSA-------------------------------------
48 Fugue 82.0018%-123 - C2 -4XNV P2RY1_HUMAN (first) A:[38-382] ----------SFKCALTKTGF--------QFYYLPAVYILVFII-GFLGNSVAIWMFVFHMKPW----------SGISVYMFNLALADFLYVLTLPALIFYYFNKTD--WI--FGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKS--LGRL--KK-KNAICISVLVWLIVVV--AISP-----------ILFY---SGTGVRKNKTIT-CYDTTSD------EY-LRSYFI-YSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRR----KSIYLVI-IVLTVFAVSYIPFHV--MKTMNLRARLDFQTPAMCAF-----N--DRVYATYQVTRG---LASLNSCVNPILYFLAGDTFRRR--------------------------------
12 PsiBlast_PDB 75.6125%-162 - C2 -2Y00 ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
15 PsiBlast_PDB 75.3525%-163 - C2 -2Y03 ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQI--------------------------------R--------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
17 PsiBlast_PDB 75.2325%-158 - C2 -4AMJ ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
13 PsiBlast_PDB 75.2225%-166 - C2 -2Y01 ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
16 PsiBlast_PDB 74.8025%-165 - C2 -2Y04 ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
14 PsiBlast_PDB 74.7125%-161 - C2 -2Y02 ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
19 PsiBlast_PDB 74.2625%-160 - C2 -3ZPR ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ---------------------------------------------MLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
18 PsiBlast_PDB 74.0725%-161 - C2 -3ZPQ ADRB1_MELGA A:[48-285] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQ------------------------------------------SRVMLMREHKALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
20 PsiBlast_PDB 73.4225%-157 - C2 -2VT4 ADRB1_MELGA A:[48-283] ------------------------------------------------------------------------------LFITSLACADLVVGLLVVPFGATLVVRGT--WL--WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFR--Y-QS--LM-TRARAKV----IICTV--WAISAL-----VSFLPIMMHWWRDEDPQALKCYQ-DPGCCDF------VT----NRA-YAIASSIISFYIPLLIM-------IFVALRVYREAKEQI--------------------------------R-------------EH--KALKTLG-IIMGVFTLCWLPFFL--VNIVNVFNRD--------L----------VPDWLFVAFNW---LGYANSAMNPIIYCRSPD-------------------------------------
10 PsiBlast_PDB 72.3023%-132 - C2 -4MQT ACM2_HUMAN A:[43-283] --------------------IVLVAGSLSLVTIIGNILVMVSIK-VNRHLQTVNNYFLFSLA-----------------------CADLIIGVFSMNLYTLYTVIGY--WP--LGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPV-KR--TT-KMAGMMIAAAWVLSFI--LWAPAI-----LFWQFI-------VGVRTVEDGE-C-----Y------IQ-FFSNAA-VTFGTAIAAFYLPVIIMTVLYWHISRASK----------------------------------------------------PSRE----KKVTRTILAILLAFIITWAPYNV--MVLINTFCAP--------CI-----P--NTVWTIGYWLCY---INSTINPACYALCNATFK-------------------------------------
8 PsiBlast_PDB 72.2023%-144 - C2 -4EA3 C562_ECOLX (first) A:[166-397] ----------------------------------------------------------------------------------NLALADTL-VLLTLPFQGTDILLGF--WP--FGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------T--SS-KAQAVNVAI-WALASV--VGVP-V-----AIMGSAQV---EDEE------IE-CLVEIPT------PQDYWGPVFAICIFLFS--FIVPVLVISVCYSLMIRRLRGV----------------------------------------RLLSGSREKDRNLR----RITRLVL-VVVAVFVGCWTPVQV--FVLAQGLGVQ--------PS-----S--ETAVAILRFCTA---LGYVNSCLNPILYAFLDE-------------------------------------
46 Fugue 71.9515%-118 - C2 -1F88 OPSD_BOVIN A:[1-348] MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYM-FLLIMLGFPINFLTLYVTVQHKKLR----TPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY--FV--FGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-F-RF--GE-NHAIMGVAFTWVMALA--CAAPPL-----V--------------GWSRYIPEGMQCSCGIDYYTPHEE-TNNESF-VIYMFVVH-FIIPLIVIFFCYGQLVFTVKEAAASATTQ-------------------------------------------KAEK----EVTRMVI-IMVIAFLICWLPYAG--VAFYIFTHQG--------SD-----F--GPIFMTIPAFFA---KTSAV--YNPVIYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA------
3 PsiBlast_PDB 71.0222%-136 - C2 -4LDE A:[221-447] --------------------------------------------------------------------------------ITSLACADLVMGLAVVPFGAAHILTKT--WT--FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFK--Y-QSLLTK-NKARVIILMVWIVSGLTSFLPIQM-----HWYRATH---------QEAI--N-CYAEETC------CD-FFTNQA-YAIASSIVSFYVPLVIM-------VFVYSRVFQEAKRQL--------------------------------Q---KFALKEHKAL----KTLGIIM-G---TFTLCWLPFFI--VNIVHVIQDN--------LI-----R--K---EVYILLNW---IGYVNSGFNPLIYCRSPD-------------------------------------
6 PsiBlast_PDB 70.8322%-142 - C2 -4QKX ADRB2_HUMAN A:[221-447] --------------------------------------------------------------------------------ITSLACADLVMGLAVVPFGAACILTKT--WT--FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFK--Y-QSLLTK-NKARVIILMVWIVSGLTSFLPIQM-----HWYRATH---------QEAI--N-CYAEETC------CD-FFTNQA-YAIASSIVSFYVPLVIM-------VFVYSRVFQEAKRQL--------------------------------Q---KFALKEHKAL----KTLGIIM-G---TFTLCWLPFFI--VNIVHVIQDN--------LI-----R--K---EVYILLNW---IGYVNSGFNPLIYCRSPD-------------------------------------
37 HHSearch 70.7623%-125 - C2 -2LNL - CXCR1_HUMAN A:[42-310] -------------------------------------VIIAYAL-VFLLSLLGNSLVMLVILYS--R--V--GRSVTDVYLLNLALADLLFALT-LPIWAASK-VNG--WI--FGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATR--T-LT--QKRHLVKFVCLGCWGLSMN--LSLPFF-----LFRQAYH------PN---NSSPV-CYEVLGN------DT-AKWRMV-LRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH------------------------------------------------MGQKH----RAMRVIF-AVVLIFLLCWLPYNL--VLLADTLMRT--------QVIQESCERRNNIGRALDATEI---LGFLHSCLNPIIYAFIGQ-------------------------------------
5 PsiBlast_PDB 70.4922%-136 - C2 -4LDO A:[221-447] --------------------------------------------------------------------------------ITSLACADLVMGLAVVPFGAAHILTKT--WT--FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFK--Y-QSLLTK-NKARVIILMVWIVSGLTSFLPIQM-----HWYRATH---------QEAI--N-CYAEETC------CD-FFTNQA-YAIASSIVSFYVPLVIM-------VFVYSRVFQEAKRQL--------------------------------Q---KFALKEHKAL----KTLGIIM-G---TFTLCWLPFFI--VNIVHVIQDN--------LI-----R--K---EVYILLNW---IGYVNSGFNPLIYCRSPD-------------------------------------
4 PsiBlast_PDB 70.4522%-142 - C2 -4LDL ADRB2_HUMAN A:[221-447] --------------------------------------------------------------------------------ITSLACADLVMGLAVVPFGAAHILTKT--WT--FGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFK--Y-QSLLTK-NKARVIILMVWIVSGLTSFLPIQM-----HWYRATH---------QEAI--N-CYAEETC------CD-FFTNQA-YAIASSIVSFYVPLVIM-------VFVYSRVFQEAKRQL--------------------------------Q---KFALKEHKAL----KTLGIIM-G---TFTLCWLPFFI--VNIVHVIQDN--------LI-----R--K---EVYILLNW---IGYVNSGFNPLIYCRSPD-------------------------------------
47 Fugue 70.3916%-100 - C2 -1U19 OPSD_BOVIN A:[4-349] MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYM-FLLIMLGFPINFLTLYVTVQHKKLR----TPLNYILLNLAVADLF--MVFGGFTTTLYTSLH--GYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-F-RF--GE-NHAIMGVAFTWVMALA--CAAPPLVGWSRYIPEGMQC-------------SC-GIDYYTP------HE-ETNNES-FVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ---------------------------------------QQESATTQKAEK----EVTRMVI-IMVIAFLICWLPYAG--VAFYIFTHQG---------------S--DFGPIFMTIPAF---FAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA