@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : NK1R_HUMAN: (2016-01-11 )
MDNVLPVDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGAHEEEPEDGPKATPSSLDLTSNCSSRSDSKTMTESFSFSSNVLS

Atome Classification :

(20 SA) ......-----...10........20........30........40........50........60........70........80........90...-.....100.......110.......120.......130......--.140-.--.-----.......150.......160.-....-..170-.---......180.......190.......200.......210..-.....220.......230..--------------------------------------------------------------------------------------------------------------------------------------------------------.....240..--.....250.......260.......270......------..280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDNVLP-----VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QP---R--L-----SATATKVVICVIWVLALLLAF-PQGY-YSTTE-T---MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGY-AYTVVGITLWASEIPGDSSD--------------------------------------------------------------------------------------------------------------------------------------------------------RYHEQVSAKR--KVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDL------YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGAHEEEPEDGPKATPSSLDLTSNCSSRSDSKTMTESFSFSSNVLS
3 PsiBlast_PDB 94.62100%-140 - C1 -2KSB NK1R_HUMAN A:[2-364] -DNVLP-----VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QP---R--L-----SATATKVVICVIWVLALLLAF-PQGY-YSTTE-T---MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGY-AYTVVGITLWASEIPGDSSD--------------------------------------------------------------------------------------------------------------------------------------------------------RYHEQVSAKR--KVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDL------YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA-------------------------------------------
2 PsiBlast_PDB 94.59100%-140 - C1 -2KSA NK1R_HUMAN A:[2-364] -DNVLP-----VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QP---R--L-----SATATKVVICVIWVLALLLAF-PQGY-YSTTE-T---MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGY-AYTVVGITLWASEIPGDSSD--------------------------------------------------------------------------------------------------------------------------------------------------------RYHEQVSAKR--KVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDL------YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA-------------------------------------------
1 PsiBlast_PDB 94.59100%-140 - C1 -2KS9 NK1R_HUMAN A:[2-364] -DNVLP-----VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QP---R--L-----SATATKVVICVIWVLALLLAF-PQGY-YSTTE-T---MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGY-AYTVVGITLWASEIPGDSSD--------------------------------------------------------------------------------------------------------------------------------------------------------RYHEQVSAKR--KVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDL------YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA-------------------------------------------
21 HHSearch 91.18100%-158 - C1 -2KS9 NK1R_HUMAN A:[2-330] -DNVLP-----VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QP---R--L-----SATATKVVICVIWVLALLLAF-PQGY-YSTTE-T---MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGY-AYTVVGITLWASEIPGDSSD--------------------------------------------------------------------------------------------------------------------------------------------------------RYHEQVSAKR--KVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDL------YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA-------------------------------------------
23 HHSearch 72.3926%-154 - C1 -2RH1 ADRB2_HUMAN (first) A:[42-477] --------------------------------------GMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-MKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPF--KY---QSLL-----TKNKARVIILMVWIVSGLTSF-LPIQ-MHWYRAT---HQEAINCYAEETCCDF-FTNQAYAIASSIVSFYVPLVIMVF-VYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTW--DAYKFCLKEH--KALKTLGIIMGTFTLCWLPFFIVNIV-HVIQDNL----------IRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-------------------------------------------------------------------------------------
30 HHSearch 70.8325%-160 * C1 *3PBL DRD3_HUMAN (first) A:[41-472] ---------------------------------------YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPV--HY---Q--HGTGQSSCRRVALMITAVWVLAFAVSC-PLLF-GFNTT------GDPTVCSISNP---------DFVIYSSVVSFYLPFGVTVL-VYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREK--KATQMVAIVLGAFIVCWLPFFLTHVL-NTHCQTC---------HVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC-------------------------------------------------------------------------------------
5 PsiBlast_PDB 70.6529%-165 - C1 -4RWA C562_ECOLX (first) A:[127-406] -----------------------------------------ALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLM-ET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPV--KALDFR--T-----PAKAKLINIC-IWVLASGVGV-PIMV-MAVTR-P---RDGAVVCMLQFPS-PSWYWDTVTKICVFLFAFVVPILIITV-CYGLMLL---------GS------------------------------------------------------------------------------------------------------------------------------------------------------------KEKDRSLR--RITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVVAALHLCIA-LGYANSSLNPVLYAFLDENFKRCFRQLC---------------------------------------------------------------------------------------
14 PsiBlast_PDB 70.5427%-148 - C1 -2YCZ ADRB1_MELGA A:[20-295] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASK--------------------------------------------------------------------------------------------------------------------------------------------------------RKRVMLMREH--KALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLAF-------------------------------------------------------------------------------------
12 PsiBlast_PDB 70.4927%-150 - C1 -2YCW ADRB1_MELGA A:[20-295] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASK--------------------------------------------------------------------------------------------------------------------------------------------------------RKRVMLMREH--KALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLAF-------------------------------------------------------------------------------------
15 PsiBlast_PDB 70.2027%-150 - C1 -2YCY ADRB1_MELGA A:[20-295] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASK--------------------------------------------------------------------------------------------------------------------------------------------------------RKRVMLMREH--KALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLAF-------------------------------------------------------------------------------------
6 PsiBlast_PDB 69.9629%-160 - C1 -4RWD C562_ECOLX (first) A:[127-406] -----------------------------------------ALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLM-ET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPV--KALDFR--T-----PAKAKLINIC-IWVLASGVGV-PIMV-MAVTR-P---RDGAVVCMLQFPS-PSWYWDTVTKICVFLFAFVVPILIITV-CYGLMLLRLRSVRLLSGS------------------------------------------------------------------------------------------------------------------------------------------------------------KEKDRSLR--RITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVVAALHLCIA-LGYANSSLNPVLYAFLDENFKRCFRQLC---------------------------------------------------------------------------------------
11 PsiBlast_PDB 69.5527%-159 - C1 -2VT4 ADRB1_MELGA A:[20-295] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------EH--KALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLA--------------------------------------------------------------------------------------
4 PsiBlast_PDB 69.4829%-160 - C1 -4N6H OPRD_HUMAN A:[130-410] -----------------------------------------ALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLM-ET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPV--KALDFR--T-----PAKAKLINIC-IWVLASGVGV-PIMV-MAVTR-P---RDGAVVCMLQFPS-PSWYWDTVTKICVFLFAFVVPILIITV-CYGLMLLRLRSVRLLSGS------------------------------------------------------------------------------------------------------------------------------------------------------------KEKDRSLR--RITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVVAALHLCIA-LGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------------------------------------------------------------------------
22 HHSearch 69.0421%-145 - C1 -3UON ACM2_HUMAN (first) A:[27-457] ----------------------------------------VLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV-IGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPL--TY---PVKR-----TTKMAGMMIAAAWVLSFILWA-PAIL-FWQFI-VGVRTVEDGECYIQFFS------NAAVTFGTAIAAFYLPVIIMTV-LYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTW--DAYPPPSREK--KVTRTILAILLAFIITWAPYNVMVLI-NTFCAPC----------IPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM--------------------------------------------------------------------------------------
17 PsiBlast_PDB 68.6827%-156 - C1 -4GBR ADRB2_HUMAN A:[13-282] --------------------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-TKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQS---L--L-----TKNKARVIILMVWIVSGLTSFLPIQM-HWYRA-T---HQEAINCYAE-ETCCDFFTNQAYAIASSIVSFYVPLVIMVF-VYSRV---FQEAKRQLQKID--------------------------------------------------------------------------------------------------------------------------------------------------------KFCLK---EH--KALKTLGIIMGTFTLCWLPFFIVNIV-HVIQDNL------IRK----EVYILLNWIGYVNSGFNPLIYCRSPD-FRIAFQELLCL-------------------------------------------------------------------------------------
18 PsiBlast_PDB 68.3928%-164 - C1 -2Y00 ADRB1_MELGA A:[20-297] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLA--------------------------------------------------------------------------------------
13 PsiBlast_PDB 68.2527%-147 - C1 -2YCX ADRB1_MELGA A:[20-294] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASK--------------------------------------------------------------------------------------------------------------------------------------------------------RKRVMLMREH--KALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFK------------------------------------------------------------------------------------------
43 Fugue 68.1421%-121 - C1 -1F88 OPSD_BOVIN A:[1-348] MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSL-HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NF---R--F-----GENHAIMGVAFTWVMALACAA-PPLVGWSRYI-P---EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFF-CYGQLVFTVKEAAASATTQ---------------------------------------------------------------------------------------------------------------------------------------------------------------KAEK--EVTRMVIIMVIAFLICWLPYAGVAFY-IFTHQG---------SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC----------------------------------------GKNPSTTVSKTETSQVAPA--------------------------
20 PsiBlast_PDB 68.1228%-164 - C1 -2Y02 ADRB1_MELGA A:[20-297] ---------------------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-RGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQS---L--M-----TRARAKVIICTVWAISALVSFLPIMM-HWWRD-E---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV-NVFNRDL------V----PDWLFVAFNWLGYANSAMNPIIYCRSPD-FRKAFKRLLA--------------------------------------------------------------------------------------
25 HHSearch 68.0424%-147 - C1 -3ODU CXCR4_HUMAN (first) A:[47-496] -----------------------------------NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV--ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHAT--NS---QRPR-----KLLAEKVVYVGVWIPALLLTI-PDFI-FANVS-E---ADDRYICDRFYPNDL---WVVVFQFQHIMVGLILPGIVILS-CYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKR--KALKTTVILILAFFACWLPYYIGISI-DSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ----------------------------------------------------------------------------